BAC Information

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BAC

Clone NameB6Ng01-233B11
Chromosome10 (Build37)
Map Location 72,509,636 - 72,510,690
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040505, Zwint
Downstream geneLOC432471, LOC544705, LOC100039981, LOC623191, Pcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233B11.bB6Ng01-233B11.g
ACCGA045249GA045250
length9291,046
definitionB6Ng01-233B11.b B6Ng01-233B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgcttagttctgtaccccatttttttaaaatttgtgtcattt
ggttttctgaagtctaacttcttgagttctttgtatattttggataaaga
aatcagtctggtggttcctcagaaaattggacatagtattatctgaggac
ccagctataccactcctgggcatatacccaaaagatgacccaacatataa
caaggacacatgctcttctatgttcaaagcagccttatttataatagcca
gaagctagaaacaacccagatgtcctttgacagaggaatagatacagaaa
atgtggtacatttacaaaatggagtactactcagctattaaaaacaatgg
cttcatgaaatttttaggcaaatggattaaactagaaaatatcattctga
gcaaggtaatacagtcacaaaagatcacacatgatatacactcactgata
agtggatatcaacccaaaagatcagaatacccaagatacaatccactgac
cacgtgaagctcaagaagaaggaaaaccaaagggagaggggggcagaatc
agctgtgggagaagagggaggagatatacaaagggtcaggaaattgaaca
aaggtatgtagcaatgggagatgggaaactgggagtagccaacagaaagt
cccagaccccaggaaaacaagaggctcccaggacccaatggggatggcat
tagctgaaatacccaacaaaggggagagagaacctatagagattatccag
agtttaaacacggcccccatttgggggatggggccacccaccctttccaa
aactttaacccagaataactcctgtctaaaggaaatacaagaacaaagtg
tggaactgagactgaggaaaggccatccacagattgccccaccataagat
ctatcccatatacagttaccaaacccaga
gaattccttgaacgagaaacagaaaataaaagttatgaggaaaggaaggc
ttttttagacatctctatggggtctggtaagacattccaaacagctgcct
aaaacacagacactgctttcccgcagaatgagagctcctcatcctgctat
tggaacagacaactgggtgtgtctaggattgaaatactggaattgcatcc
caccgtgagcacagatatcattgaacattcttgctactgatctgagactt
cataaatgccactgagtgtgtgtgtatgtgagtctgtatatgtctgtgtg
tgtccgtgtgtatgtctgtttgcatgtctgtatgtctgtgtgtgtctgca
tctgtgtgggtgtctgtgtgtgtctgtgtgcatgtgtctgtctgtctgtc
tgtctgtctgtctgtctgtgtgtctgtgtgcatgtctgtgtgtgtgtttc
tgtgtgtgtgtgtgtgtgtgtgtgcatatctgtgtgtccgtgtatgtaat
tgctttcacagatgacaaaaattgttccccttaacactgtgattttcttc
tggacaagactcagggtccttcatattctagctgggtatttaagtcatta
gttaaggtttttggtttggtttgggttttggttttcttttgttttgtttt
gttttgttttttctatgcaggaggaactaattcaaaagtgcgaggaaact
taaaatacaatttcatgtattcaaacttgtttgagaatattcgttctaaa
agctggcgtagatgcttacacattttaagtggaagcctatcggtgaaatg
aaacttcacctaaaagaccctactaatttctaacagccaaccaaacaaca
tatacattgagcttacatataagcaagaaattttcttgccatccagttga
attcctgagattttctgcatttccaaagggaacagctattctacaaccac
agcccagacctccatatgttctgctgtacagagctgcattatcaataaat
aagctttgctttttcaggaagattgtctagctgtagctcatgataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72509636_72510690
seq2: B6Ng01-233B11.g_64_1109 (reverse)

seq1  TTATCATGAGCTACAGCTAAGGACAATTCTCCTGGAAAAAGCAAAGCTTA  50
      |||||||||||||||||||  ||||||  |||| ||||||||||||||||
seq2  TTATCATGAGCTACAGCTA--GACAATCTTCCT-GAAAAAGCAAAGCTTA  47

seq1  TTTATTGAATAAATGCAGCTTCTTGTACAGCAGAACATATGGAGGTCTGG  100
      ||||||||   |||||||||   |||||||||||||||||||||||||||
seq2  TTTATTGA--TAATGCAGCT--CTGTACAGCAGAACATATGGAGGTCTGG  93

seq1  GCTGTGGTTTGTAGAATAGCTGTTCCCTTTGGAAATGCAGAAAAATCTCA  150
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  GCTGTGG-TTGTAGAATAGCTGTTCCCTTTGGAAATGCAG-AAAATCTCA  141

seq1  GG-ATTCAACTGGATGGCAAGAATATTTCTTGCTTTATATGTAAGCTCAA  199
      || |||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  GGAATTCAACTGGATGGCAAGAAAATTTCTTGC-TTATATGTAAGCTCAA  190

seq1  TGTATATGTTGTTTGGTTGGCTGTTAGAAATTAGTAGGGTCTTTTAGGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTTGTTTGGTTGGCTGTTAGAAATTAGTAGGGTCTTTTAGGTG  240

seq1  AAGTTTCATTTCACCGATAGGCTTCCACTTAAAATGTGTAAGCATCTACG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCATTTCACCGATAGGCTTCCACTTAAAATGTGTAAGCATCTACG  290

seq1  CCAGCTTTTAGAACGAATATTCTCAAACAAGTTTGAATACATGAAATTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTTAGAACGAATATTCTCAAACAAGTTTGAATACATGAAATTGT  340

seq1  ATTTTAAGTTTCCTCGCACTTTTGAATTAGTTCCTCCTGCATAGAAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTTTCCTCGCACTTTTGAATTAGTTCCTCCTGCATAGAAAAAA  390

seq1  CAAAACAAAACAAAACAAAAGAAAACCAAAACCCAAACCAAACCAAAAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAAAAGAAAACCAAAACCCAAACCAAACCAAAAAC  440

seq1  CTTAACTAATGACTTAAATACCCAGCTAGAATATGAAGGACCCTGAGTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTAATGACTTAAATACCCAGCTAGAATATGAAGGACCCTGAGTCT  490

seq1  TGTCCAGAAGAAAATCACAGTGTTAAGGGGAACAATTTTTGTCATCTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGAAGAAAATCACAGTGTTAAGGGGAACAATTTTTGTCATCTGTG  540

seq1  AAAGCAATTACATACACGGACACACAGATATGCACACACACACACACACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATTACATACACGGACACACAGATATGCACACACACACACACACA  590

seq1  CACACAGAAACACACACACAGACATGCACACAGACACACAGACAGACAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAAACACACACACAGACATGCACACAGACACACAGACAGACAGA  640

seq1  CAGACAGACAGACAGACAGACACATGCACACAGACACACACAGACACCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGACAGACAGACACATGCACACAGACACACACAGACACCCA  690

seq1  CACAGATGCAGACACACACAGACATACAGACATGCAAACAGACATACACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGCAGACACACACAGACATACAGACATGCAAACAGACATACACA  740

seq1  CGGACACACACAGACATATACAGACTCACATACACACACACTCAGTGGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACACACACAGACATATACAGACTCACATACACACACACTCAGTGGCA  790

seq1  TTTATGAAGTCTCAGATCAGTAGCAAGAATGTTCAATGATATCTGTGCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAGTCTCAGATCAGTAGCAAGAATGTTCAATGATATCTGTGCTC  840

seq1  ACGGTGGGATGCAATTCCAGTATTTCAATCCTAGACACACCCAGTTGTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGGATGCAATTCCAGTATTTCAATCCTAGACACACCCAGTTGTCT  890

seq1  GTTCCAATAGCAGGATGAGGAGCTCTCATTCTGCGGGAAAGCAGTGTCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAATAGCAGGATGAGGAGCTCTCATTCTGCGGGAAAGCAGTGTCTG  940

seq1  TGTTTTAGGCAGCTGTTTGGAATGTCTTACCAGACCCCATAGAGATGTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTAGGCAGCTGTTTGGAATGTCTTACCAGACCCCATAGAGATGTCT  990

seq1  AAAAAAGCCTTCCTTTCCTCATAACTTTTATTTTCTGTTTCTCGTTCAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGCCTTCCTTTCCTCATAACTTTTATTTTCTGTTTCTCGTTCAAG  1040

seq1  GAATTC  1055
      ||||||
seq2  GAATTC  1046