BAC Information

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BAC

Clone NameB6Ng01-233G02
Chromosome10 (Build37)
Map Location 8,922,916 - 8,923,998
singlet/doubletsinglet
Overlap genenone
Upstream geneUst, Sash1, LOC100039173, EG666625
Downstream geneLOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233G02.bB6Ng01-233G02.g
ACCGA045458GA045459
length2211,103
definitionB6Ng01-233G02.b B6Ng01-233G02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggctagcctgggatacagagtaagaccggatctcaaaacaat
ggcaaacaaataatgcttataggtaatattatatgagctcaagaggttat
atttaggaatatatgggtgtataaagtacatatatgcatgcaataacaat
taatgaaaaaagaggccataaatttgaaggataaaggaatatatgtgaag
ttttgtggggaggaaagggaa

gaattctctgtgttcattgagctttatagctgtgtctctgtgtcctgaaa
atcaccagacactccaagaagtggaattttagaaacccctgaaataggcc
gtctaactaaaaaaaaaaaaaaaaagtttaaaatagagtgccccaggagc
aaagaaattcaaggaggaaatgactttccagtttcatttcacatggggtc
tgtgactagcgcatagcaaagggtaattatgcaagattctcttgaggatc
cctcagactggatcaaagtgacttgggataagcatcccaggtggggcatt
ttgtgtatgctttgtttttcttctggaaaactacaatcaggaactattct
aggaggtaacagtgaggaattggctgactgttctacatgatcatgccaaa
aaggaaattacatgaatgaatgaacacggtgaaaatgacagaccttctgc
tgcagaggaggagcggctggccagagtgtgcacctatctttaggatccca
agaaataagacaagccttctcatcataacggcacacagtgtggctgcttt
ctctttcaatgtacttcacctattgtgtgcgcgtgcacatgtgtacacac
acacacacacacacacacacacacacacacacacactgacaatagacagt
atccagtctagaagcattatcaaagacttcaaaatagcttcagcttcata
cctttgcattaactgtattctacaagcctgcctggattaaaccatatgta
acttacactatcctgtgatatactacgagttaagttatttctgtgggcaa
aaagcttcatagagtaggtgattcccaccctcttgaaattaggaattata
tttgaatattttgaattaatttttctacagaaatttaagttggatttcac
attcatgtgttcattttcagtggaattaaaaaacaagctatcccttctat
aaaatatttgtgatgtgcctttactgggaacaagagagaaaagaattatg
ttgttgttgttgctgaggtgggggtcattataaaagaccaagacgtcagt
ttatcctccatcgcaaataaaacaaattctttaaggctcaaatgagccac
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_8922916_8923998
seq2: B6Ng01-233G02.g_71_1173

seq1  GAATTCTCTGTGTTCATTGAGCTTTATAGCTGTGTCTCTGTGTCCTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTTCATTGAGCTTTATAGCTGTGTCTCTGTGTCCTGAAA  50

seq1  ATCACCAGACACTCCAAGAAGTGGAATTTTAGAAACCCCTGAAATAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAGACACTCCAAGAAGTGGAATTTTAGAAACCCCTGAAATAGGCC  100

seq1  GTCTAACTAAAAAAAAAAAAAAAAAGTTTAAAATAGAGTGCCCCAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAACTAAAAAAAAAAAAAAAAAGTTTAAAATAGAGTGCCCCAGGAGC  150

seq1  AAAGAAATTCAAGGAGGAAATGACTTTCCAGTTTCATTTCACATGGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTCAAGGAGGAAATGACTTTCCAGTTTCATTTCACATGGGGTC  200

seq1  TGTGACTAGCGCATAGCAAAGGGTAATTATGCAAGATTCTCTTGAGGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTAGCGCATAGCAAAGGGTAATTATGCAAGATTCTCTTGAGGATC  250

seq1  CCTCAGACTGGATCAAAGTGACTTGGGATAAGCATCCCAGGTGGGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGACTGGATCAAAGTGACTTGGGATAAGCATCCCAGGTGGGGCATT  300

seq1  TTGTGTATGCTTTGTTTTTCTTCTGGAAAACTACAATCAGGAACTATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATGCTTTGTTTTTCTTCTGGAAAACTACAATCAGGAACTATTCT  350

seq1  AGGAGGTAACAGTGAGGAATTGGCTGACTGTTCTACATGATCATGCCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTAACAGTGAGGAATTGGCTGACTGTTCTACATGATCATGCCAAA  400

seq1  AAGGAAATTACATGAATGAATGAACACGGTGAAAATGACAGACCTTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATTACATGAATGAATGAACACGGTGAAAATGACAGACCTTCTGC  450

seq1  TGCAGAGGAGGAGCGGCTGGCCAGAGTGTGCACCTATCTTTAGGATCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGAGGAGCGGCTGGCCAGAGTGTGCACCTATCTTTAGGATCCCA  500

seq1  AGAAATAAGACAAGCCTTCTCATCATAACGGCACACAGTGTGGCTGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAGACAAGCCTTCTCATCATAACGGCACACAGTGTGGCTGCTTT  550

seq1  CTCTTTCAATGTACTTCACCTATTGTGTGCGCGTGCACATGTGTACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCAATGTACTTCACCTATTGTGTGCGCGTGCACATGTGTACACAC  600

seq1  ACACACACACACACACACACACACACACACACACACTGACAATAGACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACTGACAATAGACAGT  650

seq1  ATCCAGTCTAGAAGCATTATC-AAGACTTCAAAATAGCTTCAGCTTCATA  699
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCCAGTCTAGAAGCATTATCAAAGACTTCAAAATAGCTTCAGCTTCATA  700

seq1  CCTTTGCATT-ACTGTATTCTACAAGCCTGCCTGGATTAAACCATATGTA  748
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCATTAACTGTATTCTACAAGCCTGCCTGGATTAAACCATATGTA  750

seq1  ACTTACACTATCCTGTGATATACTACGAGTTAAGTTATTTCTGTGGGCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACACTATCCTGTGATATACTACGAGTTAAGTTATTTCTGTGGGCAA  800

seq1  AAAGCTTCATAGAGTAGGTGATTCCCA-CCTCTTGAAATTAGGAA-TATA  846
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  AAAGCTTCATAGAGTAGGTGATTCCCACCCTCTTGAAATTAGGAATTATA  850

seq1  TTTGAATATTTTGAAT--AATTTTCTACAG-AATTTAAGTT-GATTTCAC  892
      ||||||||||||||||  | |||||||||| |||||||||| ||||||||
seq2  TTTGAATATTTTGAATTAATTTTTCTACAGAAATTTAAGTTGGATTTCAC  900

seq1  ATTCATGTGTTCA-TTTCAGTGG-ATTTAAAAACAAGCTATCCCTCCTAT  940
      ||||||||||||| ||||||||| ||| ||||||||||||||||| ||||
seq2  ATTCATGTGTTCATTTTCAGTGGAATTAAAAAACAAGCTATCCCTTCTAT  950

seq1  AAAATATTTGTGATGTG-CTTTACTGGGAACAAGAGAGAAA--GATTATG  987
      ||||||||||||||||| |||||||||||||||||||||||   ||||||
seq2  AAAATATTTGTGATGTGCCTTTACTGGGAACAAGAGAGAAAAGAATTATG  1000

seq1  -TGT--GTGTTGC-GAGGT-GGGGTCA-TATAAAAGA-CAAGACGGTCAG  1030
       |||   |||||| ||||| ||||||| ||||||||| |||||| |||||
seq2  TTGTTGTTGTTGCTGAGGTGGGGGTCATTATAAAAGACCAAGAC-GTCAG  1049

seq1  TTTATC--TCATCGCAAATAAAACAAAATTCTTTAAGGCTCAAATGAGCC  1078
      ||||||   ||||||||||||||| |||||||||||||||||||||||||
seq2  TTTATCCTCCATCGCAAATAAAAC-AAATTCTTTAAGGCTCAAATGAGCC  1098

seq1  ACAGG  1083
      |||||
seq2  ACAGG  1103


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