BAC Information

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BAC

Clone NameB6Ng01-233K15
Chromosome10 (Build37)
Map Location 103,486,256 - 103,487,172
singlet/doubletsinglet
Overlap genenone
Upstream geneCart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233K15.bB6Ng01-233K15.g
ACCGA045654GA045655
length1,005918
definitionB6Ng01-233K15.b B6Ng01-233K15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacccaatggctgagaagaacctgaaaaaatg
ctcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcactccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcattctggcggttcctca
gaaaattggacatagtactaccggaggatcccacaacacctctcctggac
acatatccagaagatgtcccaaccggtaagaaggacacatgctccactag
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatgcatacaaaaaatgtggtacatttacacatgg
agtactactcagctattaaaaagaatgaatttatgaaaattctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaaa
gaactcaaatgatacgtactcactgataagtggatattagcccagacact
tagtatacccgagatataagatacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagcgtggacacttttccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagagatccatcccataatta
ggctccacacgatgacaccactgcatacacttttcagcaagattttgctg
aaaggaccttgatatagctgtctcttgtgagactaggccggggcctagca
aaaacgtaagtagatgctcacagtcagctattggatggagcacaggcccc
taatggaggagctagagaaagtatccaaagagctaagagatctgcaaccc
tgtat

gaattctctacattatgaaaaaccatgctagcaacaacagcagaaggaca
tttttaatttttattttccttcttaagaaattcatagtcttttaaaaata
agttatggatattctacaggtctacctaattaaatgtctccttgtagctt
ttattaaatctgcatgtgggaaagcttttctccaaggaatattggtgtac
acaatagctcttagtggctccttcaatcacggaaggagtagagatgtggt
tgaggatgcagtaacataaggacaagatatcctggaatgatacaataaag
gtccacattcctagaggacatattaattagcagaacacccttttgtttgc
ttattaatcaatttttctgagggatttaagattgacaccctaagaataaa
accatttcttaattctttaagaaagtcttaaagaacttttcttgagggct
tcaaagtggaggaattgttcaggtagacagtttggacaatttttaaattc
aatgaaagatgcaatgagacatgtctaaagaaaactttcagttttcctta
tctcttaaatagtattagttcacacttgtgtattaacaaaaacaaaaaca
aaaacgagtgtgacatttgaagttaggattattttgtctgtccttactta
acagtaatcatagtatctttctttgagttattcaatgtttgtgagtgcta
agcctacagatgtttctatactgtatgtatgtcatcaataaaaggccttg
gataccctgaaactgaagataggcatagttttgagccacataaaattccc
agtaaatgaacctagatcagtgctcataaccactgatcatcacctagtat
agtgaaacatgcagtgttgggattttgttgttgttgtgtgtgtgtgtgtg
cgtgtgtgtgtgtgtgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103486256_103487172
seq2: B6Ng01-233K15.g_65_981

seq1  GAATTCTCTACATTATGAAAAACCATGCTAGCAACAACAGCAGAAGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACATTATGAAAAACCATGCTAGCAACAACAGCAGAAGGACA  50

seq1  TTTTTAATTTTTATTTTCCTTCTTAAGAAATTCATAGTCTTTTAAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTTTTATTTTCCTTCTTAAGAAATTCATAGTCTTTTAAAAATA  100

seq1  AGTTATGGATATTCTACAGGTCTACCTAATTAAATGTCTCCTTGTAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGGATATTCTACAGGTCTACCTAATTAAATGTCTCCTTGTAGCTT  150

seq1  TTATTAAATCTGCATGTGGGAAAGCTTTTCTCCAAGGAATATTGGTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATCTGCATGTGGGAAAGCTTTTCTCCAAGGAATATTGGTGTAC  200

seq1  ACAATAGCTCTTAGTGGCTCCTTCAATCACGGAAGGAGTAGAGATGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCTCTTAGTGGCTCCTTCAATCACGGAAGGAGTAGAGATGTGGT  250

seq1  TGAGGATGCAGTAACATAAGGACAAGATATCCTGGAATGATACAATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGCAGTAACATAAGGACAAGATATCCTGGAATGATACAATAAAG  300

seq1  GTCCACATTCCTAGAGGACATATTAATTAGCAGAACACCCTTTTGTTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATTCCTAGAGGACATATTAATTAGCAGAACACCCTTTTGTTTGC  350

seq1  TTATTAATCAATTTTTCTGAGGGATTTAAGATTGACACCCTAAGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATCAATTTTTCTGAGGGATTTAAGATTGACACCCTAAGAATAAA  400

seq1  ACCATTTCTTAATTCTTTAAGAAAGTCTTAAAGAACTTTTCTTGAGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCTTAATTCTTTAAGAAAGTCTTAAAGAACTTTTCTTGAGGGCT  450

seq1  TCAAAGTGGAGGAATTGTTCAGGTAGACAGTTTGGACAATTTTTAAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGGAGGAATTGTTCAGGTAGACAGTTTGGACAATTTTTAAATTC  500

seq1  AATGAAAGATGCAATGAGACATGTCTAAAGAAAACTTTCAGTTTTCCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGATGCAATGAGACATGTCTAAAGAAAACTTTCAGTTTTCCTTA  550

seq1  TCTCTTAAATAGTATTAGTTCACACTTGTGTATTAACAAAAACAAAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAAATAGTATTAGTTCACACTTGTGTATTAACAAAAACAAAAACA  600

seq1  AAAACGAGTGTGACATTTGAAGTTAGGATTATTTTGTCTGTCCTTACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGAGTGTGACATTTGAAGTTAGGATTATTTTGTCTGTCCTTACTTA  650

seq1  ACAGTAATCATAGTATCTTTCTTTGAGTTATTCAATGTTTGTGAGTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAATCATAGTATCTTTCTTTGAGTTATTCAATGTTTGTGAGTGCTA  700

seq1  AGCCTACAGATGTTTCTATACTGTATGTATGTCATCAATAAAAGGCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACAGATGTTTCTATACTGTATGTATGTCATCAATAAAAGGCCTTG  750

seq1  GATACCCTGAAACTGAAGATAGGCATAGTTTTGAGCCACATAAAATTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCTGAAACTGAAGATAGGCATAGTTTTGAGCCACATAAAATTCCC  800

seq1  AGTAAATGAACCTAGATCAGTGCTCATAACCACTGATCATCACCTAGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGAACCTAGATCAGTGCTCATAACCACTGATCATCACCTAGTAT  850

seq1  AGTGAAACATGCAGTGTTGGGATTTTGTTGTTGTTGTGTGTGTGTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACATGCAGTGTTGGGATTTTGTTGTTGTTGTGTGTGTGTGTGTG  900

seq1  CGTGTGTGTGTGTGTGC  917
      |||||||||||||||||
seq2  CGTGTGTGTGTGTGTGC  917


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