BAC Information

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BAC

Clone NameB6Ng01-233M09
Chromosome10 (Build37)
Map Location 100,752,291 - 100,869,756
singlet/doubletdoublet
Overlap genenone
Upstream geneEG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233M09.bB6Ng01-233M09.g
ACCGA045734GA045735
length1,1871,070
definitionB6Ng01-233M09.b B6Ng01-233M09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,868,584 - 100,869,756)(100,752,291 - 100,753,373)
sequence
gaattccacatctaagaaagtttgggaattaactagggatcatgtcatag
atacagtattaatatacttttagggagggctgtagagatcaacatttaaa
gtgaataaatcaataaatcaaagtaataataacaataataaactttacca
ttccaggtcttatttctttccatactggctccctttaaacagaattatcc
aaagtgtgtgttaatttcacatttttatgcatggggttttcacgttcatc
tttctattttaaaataatcagacagtaatactgaatcacatctcactatt
cacatgaattaatcaagtggaagtatatctatttgtctcaaataaaatca
taagaaaaatatcacagtttctaaataagttattcaaaagagtcaaatga
ttgggaaaattgcccaaaaagataaaaattattggtgtaattgatttgca
accccacttacttgattgttttctgtatgagttgagtgaatcttaacatt
ccttgttcaaatttattaaattgtattattgatttttttcaatgacgtaa
aattgttagactttacattttatcgattctacatgtattttatgaggaag
ttattctaaaaataatttgacttttgtaagttagtgttgtacctgggcag
gtgttgcctgtacaatatatggcactgaaggaaaaaggatgcgtatcatt
agcctcttctgatggtttagatcatcccaacttcaatggctaagtaactg
tccctagaagctctttctggcagctccatctgatttcattttccaggcag
cctgatgaggcaaccaaaattgaacagacaatagaatacttgactgagcc
actatctccttgagcacaaccaaatgtctccatgatgatgcatcacacta
gaaatcaaaatttaagaatatttatttccaggagttgaagaagtttcacg
atttgttaccataacaaatagtgagaatggcactaattcatcttaacagg
taattgatgctgaggacacaatgtaattcagaagaagatcagaaaggatt
ctggagaacaaaatttttaaatggaagaaacaactagaatacagcagggg
cggtagaacaggttccttatgagtgaaataactaaaacagggtataaaaa
gattgttgccgataggaacatatacattattttagtc
gaattctccacacagtacctgcataaagaagcatcctggtatcagctact
ggaaaaacacatttctagtcacagaatattttgaagtctactttgactgt
aaaaattaaatatatgtaaaaaaattaagattcaaaattatttaaaaatg
taaaattattgaaaataaaatgtaaagatatttaaatgtgtctaacaata
ttcaataagaaatttaaaattagtggtacattgaactattttatcatcta
cctttataaagagtgtaattttatcgtagatgcttgcatgtttcattctt
caggtggattttatgagtatcttctcagagctatacattaaactaatagg
gatcaaattttcctttattctcaaattacttcacagttctgtgactttat
ttttaatcattatactcaacttcctgatacagaatggagttaaaacatga
cttaagttgattcatttttcttttattaagttgtttttctctacctgata
caacagtatttgcttgtggtttctatgttagagtgacaaaaatacatgga
aaccactcacccttttatagaatcgttattctttaatattgatgttgctg
gggtaatcataaccacagcagctccacacttatattgctgcataaaatgt
cattcattaaaatctttccttgtaaatcccgaaacaagaaacaaagtatt
tcttaatcatctctccattcaggtttgggaaaagttgaattagttcagta
aaacttgtgacattttctttacgttaggttttgggagcacagaaggaagt
ctccatcatttcagatagagtatgaaactaagaaattctttctcctcgta
gtttttaaaatgcctgggagtttattctatgattaagtgctaatgcagat
ttcgtggaaaaagcaatgaaatagtcctgaacagtctccctgaaagcagt
ttagatcagtactagcaaaatcacgtaattacaagattatctttcctgga
tctctagtgctagtagtaataatatggtattgcagatgctctggtgatca
aattgtgttaagtaaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100868584_100869756
seq2: B6Ng01-233M09.b_43_1229 (reverse)

seq1  GACTAAAATAATG-ATATGTTCCTATTCTGCAACAATCTTTAT-TACCCT  48
      ||||||||||||| ||||||||||| || |||||||||||| | ||||||
seq2  GACTAAAATAATGTATATGTTCCTA-TCGGCAACAATCTTTTTATACCCT  49

seq1  GTTTTGGTTATTTCACTCATAAG--AACTG-TCTA-CGCCCTTGCTGTA-  93
      ||||| |||||||||||||||||  | ||| |||| ||||| ||||||| 
seq2  GTTTTAGTTATTTCACTCATAAGGAACCTGTTCTACCGCCCCTGCTGTAT  99

seq1  TCTAGT--GTTCTT-CATTTAAAAATTTTG-TCT-CAG-ATCC-TTCTGA  136
      ||||||   ||||| ||||||||||||||| ||| ||| |||| ||||||
seq2  TCTAGTTGTTTCTTCCATTTAAAAATTTTGTTCTCCAGAATCCTTTCTGA  149

seq1  TCT--CTCTGAATTACATTGTGGTCCTCAGCATCAATTACCTGTTAAGAT  184
      |||   ||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTTCTTCTGAATTACATTGT-GTCCTCAGCATCAATTACCTGTTAAGAT  198

seq1  GAATTAGTGCCATTCTCACTATTTGTTATGGTAACAAATCGTGAAACTTC  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTGCCATTCTCACTATTTGTTATGGTAACAAATCGTGAAACTTC  248

seq1  TTCAACTCCTGGAAATAAATATTCTTAAATTTTGATTTCTAGTGTGATGC  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCCTGGAAATAAATATTCTTAAATTTTGATTTCTAGTGTGATGC  298

seq1  ATCATCATGGAGACATTTGGTTGTGCTCAAGGAGATAGTGGCTCAGTCAA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATGGAGACATTTGGTTGTGCTCAAGGAGATAGTGGCTCAGTCAA  348

seq1  GTATTCTATTGTCTGTTCAATTTTGGTTGCCTCATCAGGCTGCCTGGAAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTATTGTCTGTTCAATTTTGGTTGCCTCATCAGGCTGCCTGGAAA  398

seq1  ATGAAATCAGATGGAGCTGCCAGAAAGAGCTTCTAGGGACAGTTACTTAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCAGATGGAGCTGCCAGAAAGAGCTTCTAGGGACAGTTACTTAG  448

seq1  CCATTGAAGTTGGGATGATCTAAACCATCAGAAGAGGCTAATGATACGCA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGAAGTTGGGATGATCTAAACCATCAGAAGAGGCTAATGATACGCA  498

seq1  TCCTTTTTCCTTCAGTGCCATATATTGTACAGGCAACACCTGCCCAGGTA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTCCTTCAGTGCCATATATTGTACAGGCAACACCTGCCCAGGTA  548

seq1  CAACACTAACTTACAAAAGTCAAATTATTTTTAGAATAACTTCCTCATAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTAACTTACAAAAGTCAAATTATTTTTAGAATAACTTCCTCATAA  598

seq1  AATACATGTAGAATCGATAAAATGTAAAGTCTAACAATTTTACGTCATTG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATGTAGAATCGATAAAATGTAAAGTCTAACAATTTTACGTCATTG  648

seq1  AAAAAAATCAATAATACAATTTAATAAATTTGAACAAGGAATGTTAAGAT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCAATAATACAATTTAATAAATTTGAACAAGGAATGTTAAGAT  698

seq1  TCACTCAACTCATACAGAAAACAATCAAGTAAGTGGGGTTGCAAATCAAT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCAACTCATACAGAAAACAATCAAGTAAGTGGGGTTGCAAATCAAT  748

seq1  TACACCAATAATTTTTATCTTTTTGGGCAATTTTCCCAATCATTTGACTC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCAATAATTTTTATCTTTTTGGGCAATTTTCCCAATCATTTGACTC  798

seq1  TTTTGAATAACTTATTTAGAAACTGTGATATTTTTCTTATGATTTTATTT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATAACTTATTTAGAAACTGTGATATTTTTCTTATGATTTTATTT  848

seq1  GAGACAAATAGATATACTTCCACTTGATTAATTCATGTGAATAGTGAGAT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAATAGATATACTTCCACTTGATTAATTCATGTGAATAGTGAGAT  898

seq1  GTGATTCAGTATTACTGTCTGATTATTTTAAAATAGAAAGATGAACGTGA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCAGTATTACTGTCTGATTATTTTAAAATAGAAAGATGAACGTGA  948

seq1  AAACCCCATGCATAAAAATGTGAAATTAACACACACTTTGGATAATTCTG  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCATGCATAAAAATGTGAAATTAACACACACTTTGGATAATTCTG  998

seq1  TTTAAAGGGAGCCAGTATGGAAAGAAATAAGACCTGGAATGGTAAAGTTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGGAGCCAGTATGGAAAGAAATAAGACCTGGAATGGTAAAGTTT  1048

seq1  ATTATTGTTATTATTACTTTGATTTATTGATTTATTCACTTTAAATGTTG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTTATTATTACTTTGATTTATTGATTTATTCACTTTAAATGTTG  1098

seq1  ATCTCTACAGCCCTCCCTAAAAGTATATTAATACTGTATCTATGACATGA  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACAGCCCTCCCTAAAAGTATATTAATACTGTATCTATGACATGA  1148

seq1  TCCCTAGTTAATTCCCAAACTTTCTTAGATGTGGAATTC  1173
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGTTAATTCCCAAACTTTCTTAGATGTGGAATTC  1187

seq1: chr10_100752291_100753373
seq2: B6Ng01-233M09.g_65_1134

seq1  GAATTCTCCACACAGTACCTGCATAAAGAAGCATCCTGGTATCAGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACACAGTACCTGCATAAAGAAGCATCCTGGTATCAGCTACT  50

seq1  GGAAAAACACATTTCTAGTCACAGAATATTTTGAAGTCTACTTTGACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACACATTTCTAGTCACAGAATATTTTGAAGTCTACTTTGACTGT  100

seq1  AAAAATTAAATATATGTAAAAAAATTAAGATTCAAAATTATTTAAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAATATATGTAAAAAAATTAAGATTCAAAATTATTTAAAAATG  150

seq1  TAAAATTATTGAAAATAAAATGTAAAGATATTTAAATGTGTCTAACAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATTGAAAATAAAATGTAAAGATATTTAAATGTGTCTAACAATA  200

seq1  TTCAATAAGAAATTTAAAATTAGTGGTACATTGAACTATTTTATCATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAGAAATTTAAAATTAGTGGTACATTGAACTATTTTATCATCTA  250

seq1  CCTTTATAAAGAGTGTAATTTTATCGTAGATGCTTGCATGTTTCATTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATAAAGAGTGTAATTTTATCGTAGATGCTTGCATGTTTCATTCTT  300

seq1  CAGGTGGATTTTATGAGTATCTTCTCAGAGCTATACATTAAACTAATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGATTTTATGAGTATCTTCTCAGAGCTATACATTAAACTAATAGG  350

seq1  GATCAAATTTTCCTTTATTCTCAAATTACTTCACAGTTCTGTGACTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATTTTCCTTTATTCTCAAATTACTTCACAGTTCTGTGACTTTAT  400

seq1  TTTTAATCATTATACTCAACTTCCTGATACAGAATGGAGTTAAAACATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCATTATACTCAACTTCCTGATACAGAATGGAGTTAAAACATGA  450

seq1  CTTAAGTTGATTCATTTTTCTTTTATTAAGTTGTTTTTCTCTACCTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTGATTCATTTTTCTTTTATTAAGTTGTTTTTCTCTACCTGATA  500

seq1  CAACAGTATTTGCTTGTGGTTTCTATGTTAGAGTGACAAAAATACATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTATTTGCTTGTGGTTTCTATGTTAGAGTGACAAAAATACATGGA  550

seq1  AACCACTCACCCTTTTATAGAATCGTTATTCTTTAATATTGATGTTGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTCACCCTTTTATAGAATCGTTATTCTTTAATATTGATGTTGCTG  600

seq1  GGGTAATCATAACCACAGCAGCTCCACACTTATATTGCTGCATAAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATCATAACCACAGCAGCTCCACACTTATATTGCTGCATAAAATGT  650

seq1  CATTCATTAAAATCTTTCCTTGTAAATCCCGAAACAAGAAACAAAGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTAAAATCTTTCCTTGTAAATCCCGAAACAAGAAACAAAGTATT  700

seq1  TCTTAATCATCTCTCCATTCAGGTTTGGGAAAAGTTGAATTAGTTCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATCATCTCTCCATTCAGGTTTGGGAAAAGTTGAATTAGTTCAGTA  750

seq1  AAACTTGTGACATTTTCTTTACGTTAGGTTTT-GGAGCACAGAAGGAAGT  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAACTTGTGACATTTTCTTTACGTTAGGTTTTGGGAGCACAGAAGGAAGT  800

seq1  CTCCATCATTTCAGATAGAGTATGAAACTAAGAAATTCTTTCTCCTCGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCATTTCAGATAGAGTATGAAACTAAGAAATTCTTTCTCCTCGTA  850

seq1  GTTTTTAAAATGCCTGGGAGTTTATTCTATGATTAAGTGCTAATGCAGAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAATGCCTGGGAGTTTATTCTATGATTAAGTGCTAATGCAGAT  900

seq1  TTCGTGGATAAAGCAATGAAATAGTCCTGAACAGTCTCCCTGAAAGCAGT  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGGAAAAAGCAATGAAATAGTCCTGAACAGTCTCCCTGAAAGCAGT  950

seq1  TTAGATCAGGTTACTAGCAAAAATCAGGGTAATTACAAAGATTATCTTTC  999
      |||||||||  ||||||| |||||||  |||||||| |||||||||||||
seq2  TTAGATCAG--TACTAGC-AAAATCA-CGTAATTAC-AAGATTATCTTTC  995

seq1  CTGGATCTTCCTTAGTGCTAAGTAGTAAT-ATATGGTATTGCAGGATGCT  1048
      ||||||||    ||||||| ||||||||| ||||||||||||| ||||||
seq2  CTGGATCT---CTAGTGCT-AGTAGTAATAATATGGTATTGCA-GATGCT  1040

seq1  CTTGGTGATTCAAAATTTGTGTAAAAGTAAATATT  1083
      | |||||| |||||  ||||||  |||||||||||
seq2  C-TGGTGA-TCAAA--TTGTGT-TAAGTAAATATT  1070