BAC Information

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BAC

Clone NameB6Ng01-233M10
Chromosome10 (Build37)
Map Location 46,418,532 - 46,577,132
singlet/doubletdoublet
Overlap genenone
Upstream geneHace1, LOC664781
Downstream geneLOC100041632, LOC668252, LOC100042387, LOC100041663
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233M10.bB6Ng01-233M10.g
ACCGA045736GA045737
length1,1591,151
definitionB6Ng01-233M10.b B6Ng01-233M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,575,966 - 46,577,132)(46,418,532 - 46,419,680)
sequence
gaattccttattaaataaaaatgtagcaagtggctctgtctatacaggta
atcaaaggcaagagttgacaaaaataaatgcatacgtaagacccatcacc
accaccaccacaaccctcacacaaagaaatataaaggtgaagaaaacaaa
ataaaaaaaaacattatttaaaatttgtgctttattcagtaccataaaat
aaataaagctcatacagtgtaatttgattttagcaatatactaggaacat
gtgtataaatgttacaatatttttgtgaaagcaagttcagttcaaagtct
acatatgcagaatatcatatgtgatgtgagtgaggaaaacctttgacaaa
aggaaagcaacaaaatgttgcccagaaaattaattattagtgacttgtaa
gggtatgtgtggattctcagcttgaataagaatgaacaaaactgtagact
actttaagaggaaaggttctgtctttcatagtggcaagaatttaaattct
taactttatactttgttgatggaactatggggaaatatggcccttttatg
catggggttacaaattcatccaaccatctgccagaggaattgcaaggctg
tgactgaagtagttgtttacctttccttgggcaactccaacatctagcaa
tttgttcttgaagaagccagaagtaaaacttggaaagtgaatccacgtgg
agttcatagcagcttcttcctttcctgagaccaactgccaagactatagg
aaagaaaagagcagaaaaaggaccctggagacagccaggtagcctaggag
tcctgagcccagggacatctagggattgaggatttcaagtcagatcttca
ggatgaggaagacattcctcctcatcaacagaggctgctttttgccagcc
aacagctagaacatatctccacctttgtctgacatctagaagagtctaca
ctgttcctggtgctcactctgaaatgtttgtgaagatcttgatagcaaga
ccacagcctgcaaaggtcccattgagtcactgagacatcaagacaagaac
tcagctaaagagcatgaaagtattctccctcttcccaggtagacactgat
attcagcctagaaaataacaggaatcaaactgctggcctttccacaaggt
acggcattc

gaattcaagagaataccttgttttctatttccatttttacttgggtcttc
agttttgttttgttctgtttttcagttatctttgattctttaaaatgcac
ttgtagtttgaatatgcccacaggaagtggaactgttgggaggtgtggcc
ttgttggagggagtgtgtcgctgtggtggtgggcttggagaaactcctcc
tagttgcttgcaagacattcttttcctttttttcctatgaaataagaagt
agaactctctgctcctccagcaccatggctattctgtcatgcttctaccc
atgataataatggattgagcctcagcacctataagccagccccaattaaa
ggttgtcctttataagaattgccttgttcatggtgtctcttcatggtaat
ggaaaccctaactaagacggcaattaattaacaaatgattgctcttatat
atatttttgtgctgtaaaaagaaaaactttagagcaagttatagtgtgac
tataggaaaccagagaatatcttgatttgctcttctgccagaacatctcc
aaccacaattctctaggaaagacacaaactcggagcaactcaatttatta
agaatggggttgtgcctctaaactaccatgcagaatttggcagtgggata
gacagaaaggaaggttgattttgttaagggaaattgctttctcctcttca
ttctctggctgcctgtaagcacaaactcaatagtgaactgaagagcaact
accaaccaaaatacagcccctgtgtaagaaaagtatatactagcagacac
agaagcttggtagtgtctttagcaattttacccctttccaacgttatttt
gaacacctgtttccctccaggtaacacacaacccccttcaactctgctgc
cctcaaccacacaccaggctatctagtcaagtattttcatggtattgttc
ctctaatttgcaatgtctaccccagatttatcctgttcatgtgatattca
catgccaaatcctgcaatgataaatgcttccctatcttgccttcaggcct
ccacatggaataaacaattattccaatactttgccaatccatttccactt
cttaaacatccttaacctgatgttgtgacctccttattgcaacacaactt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46575966_46577132
seq2: B6Ng01-233M10.b_46_1204 (reverse)

seq1  GAATGCCGTA-CTTGTGAAAAAGCCCAGCAGGTTTGATCTTGGTTATTTT  49
      |||||||||| ||||||  |||| |||||| |||||||    ||||||||
seq2  GAATGCCGTACCTTGTG-GAAAGGCCAGCA-GTTTGATTCCTGTTATTTT  48

seq1  CTAGCTTGGAAATATCAGTGTCTA-CTGGGAAGAGGGAG-ATACTTTCAT  97
      ||||  ||  |||||||||||||| |||||||||||||| ||||||||||
seq2  CTAGGCTG--AATATCAGTGTCTACCTGGGAAGAGGGAGAATACTTTCAT  96

seq1  GCCTTCCTTTAGCTGAGTCTTTGTCTTGATGTTCTCAGTGACTCAATGGG  147
      ||    ||||||||||||  ||||||||||| ||||||||||||||||||
seq2  GC---TCTTTAGCTGAGTTCTTGTCTTGATG-TCTCAGTGACTCAATGGG  142

seq1  ACCTTTTGCAGGCTGGTGGTCTTGCTTATCAAGATCTTCACAAACATTTC  197
      ||| |||||||||| |||||||||| ||||||||||||||||||||||||
seq2  ACC-TTTGCAGGCT-GTGGTCTTGC-TATCAAGATCTTCACAAACATTTC  189

seq1  AGAGTGAGCACCAGGAACAGTGTAGACTCCTTCTAGATGTCAGAC-AAGG  246
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  AGAGTGAGCACCAGGAACAGTGTAGACT-CTTCTAGATGTCAGACAAAGG  238

seq1  TGGAGATATGTTCTAGCTGTTGGCTGGCAAAAAGCAGCCTCTGTTGATGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATATGTTCTAGCTGTTGGCTGGCAAAAAGCAGCCTCTGTTGATGA  288

seq1  GGAGGAATGTCTTCCTCATCCTGAAGATCTGACTTGAAATCCTCAATCCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAATGTCTTCCTCATCCTGAAGATCTGACTTGAAATCCTCAATCCC  338

seq1  TAGATGTCCCTGGGCTCAGGACTCCTAGGCTACCTGGCTGTCTCCAGGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTCCCTGGGCTCAGGACTCCTAGGCTACCTGGCTGTCTCCAGGGT  388

seq1  CCTTTTTCTGCTCTTTTCTTTCCTATAGTCTTGGCAGTTGGTCTCAGGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTCTGCTCTTTTCTTTCCTATAGTCTTGGCAGTTGGTCTCAGGAA  438

seq1  AGGAAGAAGCTGCTATGAACTCCACGTGGATTCACTTTCCAAGTTTTACT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGCTGCTATGAACTCCACGTGGATTCACTTTCCAAGTTTTACT  488

seq1  TCTGGCTTCTTCAAGAACAAATTGCTAGATGTTGGAGTTGCCCAAGGAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTTCTTCAAGAACAAATTGCTAGATGTTGGAGTTGCCCAAGGAAA  538

seq1  GGTAAACAACTACTTCAGTCACAGCCTTGCAATTCCTCTGGCAGATGGTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACAACTACTTCAGTCACAGCCTTGCAATTCCTCTGGCAGATGGTT  588

seq1  GGATGAATTTGTAACCCCATGCATAAAAGGGCCATATTTCCCCATAGTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAATTTGTAACCCCATGCATAAAAGGGCCATATTTCCCCATAGTTC  638

seq1  CATCAACAAAGTATAAAGTTAAGAATTTAAATTCTTGCCACTATGAAAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACAAAGTATAAAGTTAAGAATTTAAATTCTTGCCACTATGAAAGA  688

seq1  CAGAACCTTTCCTCTTAAAGTAGTCTACAGTTTTGTTCATTCTTATTCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCTTTCCTCTTAAAGTAGTCTACAGTTTTGTTCATTCTTATTCAA  738

seq1  GCTGAGAATCCACACATACCCTTACAAGTCACTAATAATTAATTTTCTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAATCCACACATACCCTTACAAGTCACTAATAATTAATTTTCTGG  788

seq1  GCAACATTTTGTTGCTTTCCTTTTGTCAAAGGTTTTCCTCACTCACATCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTTTGTTGCTTTCCTTTTGTCAAAGGTTTTCCTCACTCACATCA  838

seq1  CATATGATATTCTGCATATGTAGACTTTGAACTGAACTTGCTTTCACAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGATATTCTGCATATGTAGACTTTGAACTGAACTTGCTTTCACAAA  888

seq1  AATATTGTAACATTTATACACATGTTCCTAGTATATTGCTAAAATCAAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTAACATTTATACACATGTTCCTAGTATATTGCTAAAATCAAAT  938

seq1  TACACTGTATGAGCTTTATTTATTTTATGGTACTGAATAAAGCACAAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGTATGAGCTTTATTTATTTTATGGTACTGAATAAAGCACAAATT  988

seq1  TTAAATAATGTTTTTTTTTATTTTGTTTTCTTCACCTTTATATTTCTTTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATGTTTTTTTTTATTTTGTTTTCTTCACCTTTATATTTCTTTG  1038

seq1  TGTGAGGGTTGTGGTGGTGGTGGTGATGGGTCTTACGTATGCATTTATTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGGTTGTGGTGGTGGTGGTGATGGGTCTTACGTATGCATTTATTT  1088

seq1  TTGTCAACTCTTGCCTTTGATTACCTGTATAGACAGAGCCACTTGCTACA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACTCTTGCCTTTGATTACCTGTATAGACAGAGCCACTTGCTACA  1138

seq1  TTTTTATTTAATAAGGAATTC  1167
      |||||||||||||||||||||
seq2  TTTTTATTTAATAAGGAATTC  1159


seq1: chr10_46418532_46419680
seq2: B6Ng01-233M10.g_68_1218

seq1  GAATTCAAGAGAATACCTTGTTTTCTATTTCCATTTTTACTTGGGTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAATACCTTGTTTTCTATTTCCATTTTTACTTGGGTCTTC  50

seq1  AGTTTTGTTTTGTTCTGTTTTTCAGTTATCTTTGATTCTTTAAAATGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTTTTGTTCTGTTTTTCAGTTATCTTTGATTCTTTAAAATGCAC  100

seq1  TTGTAGTTTGAATATGCCCACAGGAAGTGGAACTGTTGGGAGGTGTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTTTGAATATGCCCACAGGAAGTGGAACTGTTGGGAGGTGTGGCC  150

seq1  TTGTTGGAGGGAGTGTGTCGCTGTGGTGGTGGGCTTGGAGAAACTCCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGGGAGTGTGTCGCTGTGGTGGTGGGCTTGGAGAAACTCCTCC  200

seq1  TAGTTGCTTGCAAGACATTCTTTTCCTTTTTTTCCTATGAAATAAGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCTTGCAAGACATTCTTTTCCTTTTTTTCCTATGAAATAAGAAGT  250

seq1  AGAACTCTCTGCTCCTCCAGCACCATGGCTATTCTGTCATGCTTCTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTCTGCTCCTCCAGCACCATGGCTATTCTGTCATGCTTCTACCC  300

seq1  ATGATAATAATGGATTGAGCCTCAGCACCTATAAGCCAGCCCCAATTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATAATGGATTGAGCCTCAGCACCTATAAGCCAGCCCCAATTAAA  350

seq1  GGTTGTCCTTTATAAGAATTGCCTTGTTCATGGTGTCTCTTCATGGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTCCTTTATAAGAATTGCCTTGTTCATGGTGTCTCTTCATGGTAAT  400

seq1  GGAAACCCTAACTAAGACGGCAATTAATTAACAAATGATTGCTCTTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCCTAACTAAGACGGCAATTAATTAACAAATGATTGCTCTTATAT  450

seq1  ATATTTTTGTGCTGTAAAAAGAAAAACTTTAGAGCAAGTTATAGTGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTGTGCTGTAAAAAGAAAAACTTTAGAGCAAGTTATAGTGTGAC  500

seq1  TATAGGAAACCAGAGAATATCTTGATTTGCTCTTCTGCCAGAACATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAACCAGAGAATATCTTGATTTGCTCTTCTGCCAGAACATCTCC  550

seq1  AACCACAATTCTCTAGGAAAGACACAAACTCGGAGCAACTCAATTTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAATTCTCTAGGAAAGACACAAACTCGGAGCAACTCAATTTATTA  600

seq1  AGAATGGGGTTGTGCCTCTAAACTACCATGCAGAATTTGGCAGTGGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGGTTGTGCCTCTAAACTACCATGCAGAATTTGGCAGTGGGATA  650

seq1  GACAGAAAGGAAGGTTGATTTTGTTAAGGGAAATTGCTTTCTCCTCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAGGAAGGTTGATTTTGTTAAGGGAAATTGCTTTCTCCTCTTCA  700

seq1  TTCTCTGGCTGCCTGTAAGCACAAACTCAATAGTGAACTGAAGAGCAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGGCTGCCTGTAAGCACAAACTCAATAGTGAACTGAAGAGCAACT  750

seq1  ACCAACCAAAATACAGCCCCTGTGTAAGAAAAGTATATACTAGCAGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAAAATACAGCCCCTGTGTAAGAAAAGTATATACTAGCAGACAC  800

seq1  AGAAGCTTGGTAGTGTCTTTAGCAATTTTACCCCTTTCCAACGTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTGGTAGTGTCTTTAGCAATTTTACCCCTTTCCAACGTTATTTT  850

seq1  GAACACCTGTTTCCCTCCAGGTAACACACAACCCCCTTCAACTCTGCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACCTGTTTCCCTCCAGGTAACACACAACCCCCTTCAACTCTGCTGC  900

seq1  CCTCAACCACACACCAGGCTATCTAGTCAAGTATTTTCATGGTATTG-TC  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTCAACCACACACCAGGCTATCTAGTCAAGTATTTTCATGGTATTGTTC  950

seq1  CTCTAATTTGCAATGTCTACCCCAGATTTATCCTGTTCATGTGATATTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTGCAATGTCTACCCCAGATTTATCCTGTTCATGTGATATTCA  1000

seq1  CATGCCAAATCCTGCAATGATAAATGCCT-CCTATCTTTGCTTTCA-GCC  1047
      ||||||||||||||||||||||||||| | |||||| |||| |||| |||
seq2  CATGCCAAATCCTGCAATGATAAATGCTTCCCTATC-TTGCCTTCAGGCC  1049

seq1  TTCACATTGAAT-AACAATAATTCCAATAACTTTGCCAATCAATTCCCAC  1096
      | ||||| |||| |||||| |||||||| |||||||||||| ||| ||||
seq2  TCCACATGGAATAAACAATTATTCCAAT-ACTTTGCCAATCCATTTCCAC  1098

seq1  TTCTTTAAACATTCCTAAACTGATGTTGTGACTTTCTTATTTGAA-ACAA  1145
      ||| |||||||| | ||| ||||||||||||| | ||||||  || ||||
seq2  TTC-TTAAACATCCTTAACCTGATGTTGTGACCTCCTTATTGCAACACAA  1147

seq1  CTTT  1149
      ||||
seq2  CTTT  1151


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