MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-234A13
Chromosome	10 (Build37)
Map Location	47,916,794 - 47,917,903
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668252, LOC100042387, LOC100041663, LOC100042398
Downstream gene	LOC546562, LOC100041689, Grik2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	LOC100042387 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs

name	LOC100041663 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC100042398 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042398
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC546562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Grik2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14806 MGI:95815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042387 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260757 GeneID:100042387
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs product : similar to gag protein transcript_id : XM_001478007.1

name	LOC100041663 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260723 GeneID:100041663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : similar to pol protein transcript_id : XM_001476778.1

name	LOC100041689 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260725 GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to translation initiation factor eIF2C transcript_id : XM_001476846.1

name	Grik2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754073 GeneID:14806 MGI:95815
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 2 (beta 2) transcript_id : NM_010349.1

name	LOC100042387 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260758 GeneID:100042387
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001478057.1

name	LOC100041663 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260724 GeneID:100041663
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001476828.1

name	LOC100041689 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260726 GeneID:100041689
definition	codon_start : 1 product : similar to translation initiation factor eIF2C protein_id : XP_001476896.1

name	Grik2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754074 CCDS:CCDS23830.1 GeneID:14806 MGI:95815
definition	GO_component : GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0045202 - synapse [Evidence TAS] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IMP]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor, ionotropic, kainate 2 (beta 2) protein_id : NP_034479.1

name	LOC100042398 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042398
definition	number : 1 pseudo : _no_value

name	LOC546562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546562
definition	number : 1 pseudo : _no_value

name	LOC546562 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546562
definition	number : 2 pseudo : _no_value

name	LOC668252 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260756 GeneID:668252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to Wilms tumor 1 associated protein pseudo : _no_value transcript_id : XR_033487.1

clone name	MSMg01-368M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-124M01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-380P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355A06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-073A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145O02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-460G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-123I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-234A13.b	B6Ng01-234A13.g
ACC	GA045916	GA045917
length	1,235	1,102
definition	B6Ng01-234A13.b	B6Ng01-234A13.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcctactgaattccaagttgtaggcttcaaggtcttcttacactgg caaaagcttagctacatcagaattcaatcttaaaaggcacttataataag ataatactaaaggagagtgcgtggatccataaaccagactaactcgggga tagggtatgagtataccggttaatgagaatgccaaagctccaggaggtaa gtttctgagaaactctttgcctcatgagtgcttcctggcctcatggcctg ccaagaaaacttcactggagtttgtgtagcatttccccctttcttttttt ttatttttcagcccaagtttcaggatgcccagcctcatcttagctataga tctcagaagtgcttttaagatgagtggaaacacaacgatttactaataaa atagtggtaataataatagcaactaggataatatgttgaacccaatccag gggattcaatgcacttaggttatttttttatatctctggccaattcatca atgttccaagtgtccaagtgactattgctaatatctgacatttctgcctt tttagccttaatatatgctaggtcctgccctattgttaagactactattt ctaagacattaacctttgcctcctattcttacatggctctgtggaatgta cctctgtctagattgaaatgattccaagatcggggtgcccgtctagactg tctggccctcatagcaaaccttaatcccaaatcagaccaaaagccacaat atgtactggaatgcttcttgaatgaagataataactgccacctgagctgt tagaggtggggatgcacgcctgctgcagtcaggctgaagggctttgattg acctgcttgaaaaacaaagtccagactgtgaaaggcaaccttacaaatgc ttcttttggggaagtccaggtactccattcaattgcaaattagtaaagat caggcttagagtagagttcctgttgtgcaggaggtgactttgaaaattgt aagaaagactacaggatttttagccaaatcaaggttagagtcatacttac tagaaagattcaggatcttggtgttctagttgaaggaactatctctctga aggcagccatcggctcaatcttcttttttgtgaaaaacacgaatgggagc cctctctcgaattaggaccggacctgaacttcatctagtaaatggtctcg tgccactcttaacaatagtgcttatcagaaagtga	gaattcaggtgggaaatacaaatcctactgttttcaactagagataaaat agtatttaaatgtcttataacaaaatttaaatatattgtgagaaaaagta atatttgtcatttagatatcagtacttatgtactaatttcttaatcacat gcttgctttgaagataaactttattttgattaacttaaactttaatctct tttagaagttaactcctgcaaaaggtgagaacaaatgtagagatccacag ccagataacactcagagattaagagaccttggaatattcaatcctaaatg agatacctacaacaaatcactcagagcttaacctgtggaagaagatgcat aaatagtgtaagagacaggtgggataaaagacaccaggagaacatgactc taaatctacatgaacaaagctcatatgattttagagctattggcacaatg tacacaaggtctgcaggggtctgcacaacttcctctgcatatatatgcca tctataaaaccattcagtttaatattttaatattttatggaatcctggat gtaaaaacaaatgggaaatggtccctgattcttatgacttcttttgagtt aatttcctgtccaaatttgagtttttattttatggatttattttattttg ttatatttaaaataaatgaatgaatgaaggaatgaatgaataaaacatga atcaatgaaagaaaatatagccactaaaggaaaaataaacagcttaatgg tcatttatgcctaacgggaatggaaaaatcagttttctccagtggtgtga agtaaggtatatcaactcaagggtagatctcatggagcattatatattgg actaggtgaccaatatataattgactccacaagttattttgtttgtttgt tctgtttaattttgggttttgtgctttcttgtgtttttatttggttatag tttggcattgtttatttgtttttttttttgtgtgtgttttgtttttttat ttctgttgagctgtttgtttttctttatgggagtcatctaattgttttgt tttaggaaaaatgttattaagagagttagggaaggagaaaatatcttcca tt
quality values	Open. Hide. 58 33 27 41 62 62 62 62 62 62 62 62 47 56 47 62 62 31 14 54 62 62 62 54 62 62 62 59 62 62 51 24 12 12 23 32 25 29 37 34 62 62 62 59 62 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 59 62 62 59 62 59 59 56 50 56 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 54 49 58 58 58 58 54 54 58 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 48 52 52 58 58 58 54 47 58 54 58 54 58 54 58 58 58 58 42 58 58 58 49 58 58 52 58 58 54 54 41 54 58 52 47 54 58 52 58 52 54 54 58 58 54 58 58 58 51 51 41 58 53 58 52 53 51 54 49 51 49 58 47 58 58 58 58 58 51 52 58 48 51 47 58 50 50 58 50 50 38 58 58 58 54 58 51 53 58 53 46 43 58 50 36 58 46 41 41 58 51 53 58 54 58 53 53 53 39 46 37 58 58 49 58 51 48 54 41 34 58 46 51 40 58 53 58 50 52 47 49 58 58 52 51 35 41 43 51 53 52 41 50 52 38 46 50 58 40 52 52 58 51 18 22 44 51 39 39 50 35 29 39 35 50 51 33 39 49 39 31 40 49 45 49 33 25 34 46 50 45 37 30 54 22 44 31 51 54 54 37 54 42 40 49 29 50 53 42 42 53 39 35 40 40 49 42 33 35 32 52 42 52 47 40 52 45 44 54 30 29 39 37 54 33 32 28 34 53 45 35 41 45 45 53 32 44 30 34 33 32 34 31 18 52 32 52 31 32 34 30 39 14 40 29 52 52 52 51 31 19 33 35 28 29 34 38 40 32 53 52 36 31 31 31 31 31 43 38 33 51 30 42 31 43 45 23 51 29 28 43 51 42 31 34 24 43 37 14 12 36 30 31 31 33 29 31 32 48 46 46 32 31 30 46 32 28 31 24 34 33 22 42 32 34 42 29 38 37 48 28 27 42 13 29 25 20 28 31 27 30 30 16 46 31 30 30 30 34 39 30 31 46 46 41 41 47 47 37 33 32 24 27 31 31 25 18 30 22 31 33 37 26 26 21 30 36 33 21 26 17 24 26 24 25 48 31 23 32 37 22 24 34 48 30 16 24 24 31 9 19 21 25 35 32 30 18 32 16 24 32 14 32 8 17 24 14 24 22 28 12 19 21 9 23 28 13 25 14 26 15 13 10 18 29 17 33 48 29 13 26 43 39 14 19 8 16 11 8 7 6 18 30 12 5 9 11 8 9 15 6 11 9 19 12 30 47 34 24 12 14 15 19 10 29 5 7 6 7 11 10 18 8 17 20 15 11 6 24 24 12 21 16 13 14 16 20 28 13 6 5 7 28 8 5 10 15 20 13 5 12 9 20 7 6 6 5 5 3 5 9 8 8 11 20 19 13 20 23 15 24 21 8 7 19 25 10 10 18 7 4 6 7 7 6 6 10 16 7 21 10 16 20 9 14 10 10 16 3 2 3 2 6 22 5 5 12 8 9 5 6 3 6 26 30 17 7 5 5 7 4 14 19 6 9 4 3 3 4 6 8 10 23 5 7 6 4 4 13 3 11 7 6 21 10 7 1 7 7 6 10 4 7 5 11 4 13 5 3 1 1 5 4 2 3 4 3 1 1 6 3 3 3 3 9 5 5 13 28 26 6 24 14 1 2 4 5 12 7 5 8 22 5 13 14 7 24 25 5 7 23 9 5 4 3 3 1 2 2 3 6 5 6 2 3 3 14 11 11 4 2 5 14	Open. Hide. 62 47 56 44 62 59 36 62 62 62 56 51 45 24 28 28 46 50 48 59 56 54 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 54 43 43 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 54 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 54 54 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 58 58 54 58 54 58 58 58 58 58 58 47 58 58 58 58 58 51 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 42 58 54 54 58 58 58 58 54 42 58 58 54 58 58 58 58 58 58 40 58 58 52 58 58 58 58 58 45 37 58 53 53 54 51 51 58 58 48 58 58 53 58 58 58 58 51 54 46 58 47 53 58 53 58 58 50 58 51 58 51 58 38 35 49 46 54 58 58 58 58 52 53 58 58 58 51 50 42 58 58 49 51 47 58 58 51 39 58 47 50 52 58 58 51 53 47 58 58 58 58 34 49 40 50 52 49 58 51 39 58 58 58 51 41 58 44 49 54 58 52 49 54 52 50 49 54 51 51 52 58 46 50 41 51 51 53 53 54 54 50 53 50 34 34 39 44 39 53 54 54 50 49 42 37 38 53 54 53 54 53 52 52 54 54 52 53 45 51 52 39 51 44 36 47 45 42 49 37 37 49 39 54 54 54 44 37 30 54 39 40 37 45 45 51 42 37 36 36 46 47 32 42 40 53 54 49 37 40 41 32 33 25 31 41 32 32 49 51 41 31 31 34 40 38 52 53 51 31 32 37 40 32 52 53 51 32 32 31 33 32 23 31 26 47 46 30 43 30 31 43 43 25 30 32 27 15 46 18 31 31 31 31 37 33 33 34 51 33 26 29 38 51 45 31 31 23 26 31 31 42 38 32 34 31 46 31 23 35 17 15 42 31 32 30 43 34 34 36 31 30 31 27 38 25 10 22 26 30 19 11 19 13 44 31 30 35 32 38 30 35 37 31 29 30 30 39 27 36 23 37 25 33 31 38 28 37 27 47 47 31 41 24 48 31 39 22 44 25 30 11 24 38 31 31 24 44 31 18 30 29 44 44 34 20 48 17 35 48 44 25 31 25 32 34 31 48 32 29 17 22 18 26 36 22 48 43 43 26 21 23 48 30 24 26 11 19 34 31 30 20 19 33 19 23 25 21 30 16 17 16 11 43 10 31 31 47 20 21 9 5 25 43 43 37 43 43 43 43 20 33 23 11 7 7 11 5 3 16 9 11 4 3 7 15 21 13 7 5 5 5 29 23 20 9 27 21 21 16 8 17 10 25 9 22 28 10 11 6 28 32 34 15 15 14 34 16 13 27 13 8 8 9 5 9 23 23 16 22 5 8 7 11 16 8 13 25 27 6 8 14 27 16 27 21 14 6 16 30 26 24 26 9 19 6 13 5 8 18 11 5 4 7 3 2 3 7 7 11 5 28 11 6 5 17 5 8 4 11 30 23 6 5 14 18 10 4 7 7 20 5 10 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_47916794_47917903
seq2: B6Ng01-234A13.g_69_1170

seq1  GAATTCAGGTGGGAAATACAAATCCTACTGTTTTCAACTAGAGATAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGGGAAATACAAATCCTACTGTTTTCAACTAGAGATAAAAT  50

seq1  AGTATTTAAATGTCTTATAACAAAATTTAAATATATTGTGAGAAAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTAAATGTCTTATAACAAAATTTAAATATATTGTGAGAAAAAGTA  100

seq1  ATATTTGTCATTTAGATATCAGTACTTATGTACTAATTTCTTAATCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTCATTTAGATATCAGTACTTATGTACTAATTTCTTAATCACAT  150

seq1  GCTTGCTTTGAAGATAAACTTTATTTTGATTAACTTAAACTTTAATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTTGAAGATAAACTTTATTTTGATTAACTTAAACTTTAATCTCT  200

seq1  TTTAGAAGTTAACTCCTGCAAAAGGTGAGAACAAATGTAGAGATCCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGTTAACTCCTGCAAAAGGTGAGAACAAATGTAGAGATCCACAG  250

seq1  CCAGATAACACTCAGAGATTAAGAGACCTTGGAATATTCAATCCTAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAACACTCAGAGATTAAGAGACCTTGGAATATTCAATCCTAAATG  300

seq1  AGATACCTACAACAAATCACTCAGAGCTTAACCTGTGGAAGAAGATGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTACAACAAATCACTCAGAGCTTAACCTGTGGAAGAAGATGCAT  350

seq1  AAATAGTGTAAGAGACAGGTGGGATAAAAGACACCAGGAGAACATGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTAAGAGACAGGTGGGATAAAAGACACCAGGAGAACATGACTC  400

seq1  TAAATCTACATGAACAAAGCTCATATGATTTTAGAGCTATTGGCACAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTACATGAACAAAGCTCATATGATTTTAGAGCTATTGGCACAATG  450

seq1  TACACAAGGTCTGCAGGGGTCTGCACAACTTCCTCTGCATATATATGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGGTCTGCAGGGGTCTGCACAACTTCCTCTGCATATATATGCCA  500

seq1  TCTATAAAACCATTCAGTTTAATATTTTAATATTTTATGGAATCCTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAACCATTCAGTTTAATATTTTAATATTTTATGGAATCCTGGAT  550

seq1  GTAAAAACAAATGGGAAATGGTCCCTGATTCTTATGACTTCTTTTGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAACAAATGGGAAATGGTCCCTGATTCTTATGACTTCTTTTGAGTT  600

seq1  AATTTCCTGTCCAAATTTGAGTTTTTATTTTATGGATTTATTTTATTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTGTCCAAATTTGAGTTTTTATTTTATGGATTTATTTTATTTTG  650

seq1  TTATATTTAAAATAAATGAATGAATGAAGGAATGAATGAATAAAACATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTAAAATAAATGAATGAATGAAGGAATGAATGAATAAAACATGA  700

seq1  ATCAATGAAAGAAAATATAGCCACTAAAGGAAAAATAAACAGCTTAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGAAAGAAAATATAGCCACTAAAGGAAAAATAAACAGCTTAATGG  750

seq1  TCATTTATGCCTAACGGGAATGGAAAAATCAGTTTTCTCCAGTGGTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATGCCTAACGGGAATGGAAAAATCAGTTTTCTCCAGTGGTGTGA  800

seq1  AGTAAGGTATATCAACTCAAGGGTAGATCTCATGGAGCATTATATATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGTATATCAACTCAAGGGTAGATCTCATGGAGCATTATATATTGG  850

seq1  ACTAGGTGACCAATATATAATTGACTCCACAAGTTATTTTGTTTGTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTGACCAATATATAATTGACTCCACAAGTTATTTTGTTTGTTTGT  900

seq1  TCTGTTTAATTTT-GGTTTTGTGCTTTCTTTGTGTTTTTATTTGGTTATA  949
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  TCTGTTTAATTTTGGGTTTTGTGCTTTC-TTGTGTTTTTATTTGGTTATA  949

seq1  GTTTGGCATTGTTTATTTTGTTTTTTTTTTGTTGTTGTTGTTTTTGTTTT  999
      ||||||||||||||||||  |||||||||||    |||   |||||||||
seq2  GTTTGGCATTGTTTATTTGTTTTTTTTTTTG----TGTGTGTTTTGTTTT  995

seq1  TTTTAATTTTCTGTTTGGAGGCTGTTTG-TTTTCTTTATTGGGGAGTCAT  1048
      |||    ||||||||  || |||||||| ||||||||||  |||||||||
seq2  TTT---ATTTCTGTT--GA-GCTGTTTGTTTTTCTTTAT--GGGAGTCAT  1037

seq1  CTATTTGTTTTGTTTTTAGGAAAAATGTTATTAAGAGAG-TAGGG-AGGA  1096
      ||| |||||||| |||||||||||||||||||||||||| ||||| ||||
seq2  CTAATTGTTTTG-TTTTAGGAAAAATGTTATTAAGAGAGTTAGGGAAGGA  1086

seq1  G-AAATATC-TCCATT  1110
      | ||||||| ||||||
seq2  GAAAATATCTTCCATT  1102

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information