BAC Information

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BAC

Clone NameB6Ng01-234F10
Chromosome10 (Build37)
Map Location 65,191,089 - 65,192,146
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna3, LOC665206, LOC216036
Downstream gene1700023F02Rik, 4930407I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234F10.bB6Ng01-234F10.g
ACCGA046133GA046134
length1,1851,059
definitionB6Ng01-234F10.b B6Ng01-234F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacatcgatggattttcatatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
atttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttc
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgcttctagtgagtctagctaagggtttatctat
cttgttaattttctcaaagaaccaactcctcctttggttaattctttgaa
tagttctttttgtttccacttggttgatttcatccctgagtttgattatt
tcctgccatctactcctcttgggtgaatttgcttcctttttttctagagc
ttttagatgtgttgtcaagctgctagtatgtgctctctcccgttcttctt
gggaggcactcagagctatgagttctgtctcgaaatgcttttcatgtgtc
ccaaagttgggtaagtgtggctcatttcattaaactctaaaagcctttaa
ttcttcttaattccttccttgacaagattcattgaagaagaatgtttgtc
agttccaggtagatgtaggcttccattctttttgccattgaatactagct
taggctaggtgtgaacctgaatgagaatgcatcgt
gaattccagtgtatagtgggaaaactctcaaaattctctgtaacagtgga
aagtcacttgttcatagagactatggagactttgcgtggtgtactctaaa
gaggaaggccaacaaagaggaaaaaattctccatgcttctaagggaaaca
atgcttaaacaaggcctttggcttatcttaaatggctggtaaaagaaaga
ctagaacaaaggcaaaaattaaccttggctacctatatggtctcaaacta
tcagtgaagtgtatccaggatgaaaatgatccatatgtttcttaaacagt
tcaagggattgtagttctcaaattatgcttcaccatatgaagtgttattt
ggacaactatatctcatggtgaatcgagagagagagagagagagagagag
agagagagcacagatataggaaaagcccctgacttacttcagcactgcaa
tgaatattgatagctaaaaactggcctatcttcttaagtacagagggcaa
atgtaaagctgtatttaccaacagtggaacactatctctttctggaagag
cacttctcacagctgaaatatgcctttgcactccagctacctaaattccc
tgattaaaggtgatagatatcttgatttactatcatcaaactcatggatt
tgaaaaattactcagggtgtgccagtggtagccttagaacttttgctaga
caaaaaggacggaaagaaattttgtgtctcttttaaaattgtcagtagat
gttgactttatctgattcaaattttaatgttttcaggtgctttctttatg
taggcaatctaaacaaacagggctacactgtcctcctacagggcttctgg
tacatggttcaggcagtcctacaattacatttcaggttactaatccagga
cttagtttaaatataatcctcttggattttggctctcaacattccaagtt
ataaatgaagatacctggcaaccagtctgtatttatgctggccattgata
atgttgaactgtccgagcaaccaggctttcctttgtaactgactaccaac
aaacaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_65191089_65192146
seq2: B6Ng01-234F10.g_67_1119 (reverse)

seq1  TTTGTTATTGTAGTCAGTTACAAAATGTAAAGCCATTGGTTTGCTCGAAC  50
      |||||  | |||||||||||||||  | ||||||  ||| ||||||| ||
seq2  TTTGT--TGGTAGTCAGTTACAAA--GGAAAGCC--TGG-TTGCTCGGAC  43

seq1  AGCTTCAAACATTTATCAATGGCCAGCATAAATACAGAACTGGCTGCCAG  100
      || ||| |||| ||||||||||||||||||||||||| ||||| ||||||
seq2  AG-TTC-AACA-TTATCAATGGCCAGCATAAATACAG-ACTGGTTGCCAG  89

seq1  GTATCTTCATTTATAACTTGGGAATGTTGAGAGCCAAAAT-CAAGAGGAT  149
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  GTATCTTCATTTATAACTT-GGAATGTTGAGAGCCAAAATCCAAGAGGAT  138

seq1  AATATTTAAACTAAGT-CTTGATTAGTAACTTGAAATGTAATTGTAGAAC  198
       ||||||||||||||| || |||||||||| |||||||||||||||| ||
seq2  TATATTTAAACTAAGTCCTGGATTAGTAACCTGAAATGTAATTGTAGGAC  188

seq1  TGCCTGAACCATGTACCAG-AGCCCTGTAGGAGGACAGTGTAGCCCTGTT  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCCTGAACCATGTACCAGAAGCCCTGTAGGAGGACAGTGTAGCCCTGTT  238

seq1  TG-TTAGA-TGCCTACATAAAG-AAGCACCTGAAAACATTAAAATTTGAA  294
      || ||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  TGTTTAGATTGCCTACATAAAGAAAGCACCTGAAAACATTAAAATTTGAA  288

seq1  TCAGATAAAGTCAACATCTAACTGACAATTTT-AAAGAGACACAAAATTT  343
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  TCAGATAAAGTCAACATCT-ACTGACAATTTTAAAAGAGACACAAAATTT  337

seq1  CTTTCCGTCCTTTTTGTCTAGC-AAAGTTCTAAGGCTACCACTGGCACAC  392
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTTCCGTCCTTTTTGTCTAGCAAAAGTTCTAAGGCTACCACTGGCACAC  387

seq1  CCTGAGTAATTTTTCAAATCCATGAGTTTGATGATAGTAAATCAAGATAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTAATTTTTCAAATCCATGAGTTTGATGATAGTAAATCAAGATAT  437

seq1  CTATCACCTTTAATCAGGGAATTTAGGTAGCTGGAGTGCAAAGGCATATT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACCTTTAATCAGGGAATTTAGGTAGCTGGAGTGCAAAGGCATATT  487

seq1  TCAGCTGTGAGAAGTGCTCTTCCAGAAAGAGATAGTGTTCCACTGTTGGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTGAGAAGTGCTCTTCCAGAAAGAGATAGTGTTCCACTGTTGGT  537

seq1  AAATACAGCTTTACATTTGCCCTCTGTACTTAAGAAGATAGGCCAGTTTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAGCTTTACATTTGCCCTCTGTACTTAAGAAGATAGGCCAGTTTT  587

seq1  TAGCTATCAATATTCATTGCAGTGCTGAAGTAAGTCAGGGGCTTTTCCTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCAATATTCATTGCAGTGCTGAAGTAAGTCAGGGGCTTTTCCTA  637

seq1  TATCTGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATTCACCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATTCACCA  687

seq1  TGAGATATAGTTGTCCAAATAACACTTCATATGGTGAAGCATAATTTGAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATATAGTTGTCCAAATAACACTTCATATGGTGAAGCATAATTTGAG  737

seq1  AACTACAATCCCTTGAACTGTTTAAGAAACATATGGATCATTTTCATCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAATCCCTTGAACTGTTTAAGAAACATATGGATCATTTTCATCCT  787

seq1  GGATACACTTCACTGATAGTTTGAGACCATATAGGTAGCCAAGGTTAATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACACTTCACTGATAGTTTGAGACCATATAGGTAGCCAAGGTTAATT  837

seq1  TTTGCCTTTGTTCTAGTCTTTCTTTTACCAGCCATTTAAGATAAGCCAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTGTTCTAGTCTTTCTTTTACCAGCCATTTAAGATAAGCCAAA  887

seq1  GGCCTTGTTTAAGCATTGTTTCCCTTAGAAGCATGGAGAATTTTTTCCTC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGTTTAAGCATTGTTTCCCTTAGAAGCATGGAGAATTTTTTCCTC  937

seq1  TTTGTTGGCCTTCCTCTTTAGAGTACACCACGCAAAGTCTCCATAGTCTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGCCTTCCTCTTTAGAGTACACCACGCAAAGTCTCCATAGTCTC  987

seq1  TATGAACAAGTGACTTTCCACTGTTACAGAGAATTTTGAGAGTTTTCCCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACAAGTGACTTTCCACTGTTACAGAGAATTTTGAGAGTTTTCCCA  1037

seq1  CTATACACTGGAATTC  1058
      ||||||||||||||||
seq2  CTATACACTGGAATTC  1053