BAC Information

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BAC

Clone NameB6Ng01-236B15
Chromosome10 (Build37)
Map Location 35,697,212 - 35,784,313
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041585
Downstream geneLOC667860, Hs3st5, Hdac2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236B15.bB6Ng01-236B15.g
ACCGA047402GA047403
length1,2051,121
definitionB6Ng01-236B15.b B6Ng01-236B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,783,120 - 35,784,313)(35,697,212 - 35,698,327)
sequence
gaattcatcaacaacttaatagctgttttagctgagataagtactatgat
gtggttacaaagttcttgcttccggattatcttgatttaatgttcactga
ataagcattatcaccttaattttatttcctctggctattaacataatgat
gattgaacttttcatgaaataaggttacaagttaagagaatattctattc
catgatttccgtagcatcacaaacctagtggtgagagatggagaaagttg
gctgtagctgttatttctaagaactaaattcttagagttcttatttacgg
gctacttaacttgtgtgattgagtctctacactttgtctccttggtctaa
gctatctatatagggattttgtgctttcttcaatacctttagctaagtgg
caaaggcttatgttataatgctatcttactgttttgaaaacaaaaaatct
cccttttcctgggaatttgcaagtgtaatgccttagtgttaggatctcta
tgttccatgtcctatgttctcttctttttgatagagtcaatgataaaatg
tttatgaatagaatatagcatgatggatagaataactgtcctggggtgac
tgccctctgttctgaatgttctctcttctccttgtcagtgctgtgggaat
ctagctcacatgttctaccttagggtgatgcccatatggtaagaaactga
aaacttcagtccatgagagaaaatgaatacttacaaatcaagaacaaact
gtaaaaaaagacaaaaagatatgaagggtcttggagaaataactttttca
atgtgggacttttaggcctagattaaaaaaaactactttaaataagagtg
tttagatgcatctaataatgattcttatattccctctaaaggtcagagag
aaaagatggtaaataggacaaggggaggtccttgtagaagtagttttctt
ggggagattccaatctccttttgtcaggatagcaacactccatttcagta
gtagcaggataccaaacacaaaacatcagcaatggcatagtccagaagaa
aatagtcaggtctctgctaatctacacaagtcagcaaggagtggaccagg
actagtgagatgcccagggagaagtttctcggccatgcttcttctcaggt
cagttggagtattcagcagatgagatggagaaacccaagggaagccatta
caagg

gaattctctacaaacattagagctgacacatgtaagggaaagagaaagac
attacagtgagctcaaagatgtgggaggggcaagaaatggattttctttc
aaaatctctcaaaagaaacacaaaaggcacattgatttcttctgaattct
agagtgagaagatattaaatttgattgctttaaagtaatttactgttata
tcagtcatgtgaacaggatacaacatttttctcatctctttacatccaaa
ttctgttcatgatattttgtggctttcatacaacggagcttaactttttc
tgtagaatctttttcttagtcttgtgatgtttagagaaggaagacatttt
cttaatttaaattttactttttatttccatcactactgtaatgtaaatac
aactgatattcacatattaatcttagatcacttaattgtgggtagttttt
gtataatattatcttacctatgagtaaaaaaaaaaatgctatttctttca
tgtctcctgagaaaaagatgatcttcttttaaacatttgttttaaaatct
tgtttcagaaatgtgttgttatacagtattttggactttgaatacttggt
gcccatcttgtgaatctatttgtagaagtataacctgactggggaaagta
tgtttcaggcccatggagataatttatttattccaggctacatcctatgt
ttctcttttcttagagacctgagctattccctaggccccacactaccacc
aacaccactacacacacacacacacacacacacacacacacacacacaca
cacacacacaaatgatgtactgaacccatcaaaacaatgtgctttcttca
aattgtttccatcagttattgttacagcagcattaaaggtaattaaataa
aataatctaactttccctctccaggaacaaataattctcgtgtaattgtc
ttttccaccatagtagcttcaaagaccttttcaggaaataaagaatgcac
aaaggaaattgaaggagaaaataaatgttataggatgaagaaaatgtttc
catccaagagaggagaagaatatacacctggaggagctggagtacccaga
cctttgataccttgtttcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35783120_35784313
seq2: B6Ng01-236B15.b_44_1248 (reverse)

seq1  CCTTGTAAT-GCTTCC--TTGGTTTCT-CATCTTCATCTTCTCTGATTCT  46
      ||||||||| ||||||  | ||||||| |||| |||||| ||   || ||
seq2  CCTTGTAATGGCTTCCCTTGGGTTTCTCCATC-TCATCTGCT-GAATACT  48

seq1  C--ACTTCACTGAG-AGAAGCATTGCCGAG-AACTTCTCC--TGGCATCT  90
      |  |||   ||||| |||||||| |||||| |||||||||   |||||||
seq2  CCAACTGACCTGAGAAGAAGCATGGCCGAGAAACTTCTCCCTGGGCATCT  98

seq1  CAACTAGTCCTGGT-CACT-CTTGCTGACTTGTGTAGATTTAGCAGAGAC  138
      | |||||||||||| |||| |||||||||||||||||| |||||||||||
seq2  C-ACTAGTCCTGGTCCACTCCTTGCTGACTTGTGTAGA-TTAGCAGAGAC  146

seq1  CTGACTA-TTTCTTCTGGACTATGCCATTGCTGATGTTTTGTGTTTGGTA  187
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTATTTTCTTCTGGACTATGCCATTGCTGATGTTTTGTGTTTGGTA  196

seq1  TCCTGCTACTACTGAAATGGAGTGTTGCTATCCTGACAAAAGGAGATTGG  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTACTACTGAAATGGAGTGTTGCTATCCTGACAAAAGGAGATTGG  246

seq1  AATCTCCCCAAG-AAACTACTTCTACAAGGACCTCCCCTTGTCCTATTTA  286
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCCAAGAAAACTACTTCTACAAGGACCTCCCCTTGTCCTATTTA  296

seq1  CCATCTTTTCTCTCTGACCTTTAGA-GGAATATAAGAATCATTATTAGAT  335
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCATCTTTTCTCTCTGACCTTTAGAGGGAATATAAGAATCATTATTAGAT  346

seq1  GCATCTAAACACTCTTATTTAAAGTAGTTTTTTTTAATCTAGGCCTAAAA  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTAAACACTCTTATTTAAAGTAGTTTTTTTTAATCTAGGCCTAAAA  396

seq1  GTCCCACATTGAAAAAGTTATTTCTCCAAGACCCTTCATATCTTTTTGTC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACATTGAAAAAGTTATTTCTCCAAGACCCTTCATATCTTTTTGTC  446

seq1  TTTTTTTACAGTTTGTTCTTGATTTGTAAGTATTCATTTTCTCTCATGGA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACAGTTTGTTCTTGATTTGTAAGTATTCATTTTCTCTCATGGA  496

seq1  CTGAAGTTTTCAGTTTCTTACCATATGGGCATCACCCTAAGGTAGAACAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTTTCAGTTTCTTACCATATGGGCATCACCCTAAGGTAGAACAT  546

seq1  GTGAGCTAGATTCCCACAGCACTGACAAGGAGAAGAGAGAACATTCAGAA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTAGATTCCCACAGCACTGACAAGGAGAAGAGAGAACATTCAGAA  596

seq1  CAGAGGGCAGTCACCCCAGGACAGTTATTCTATCCATCATGCTATATTCT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCAGTCACCCCAGGACAGTTATTCTATCCATCATGCTATATTCT  646

seq1  ATTCATAAACATTTTATCATTGACTCTATCAAAAAGAAGAGAACATAGGA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAACATTTTATCATTGACTCTATCAAAAAGAAGAGAACATAGGA  696

seq1  CATGGAACATAGAGATCCTAACACTAAGGCATTACACTTGCAAATTCCCA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACATAGAGATCCTAACACTAAGGCATTACACTTGCAAATTCCCA  746

seq1  GGAAAAGGGAGATTTTTTGTTTTCAAAACAGTAAGATAGCATTATAACAT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGGAGATTTTTTGTTTTCAAAACAGTAAGATAGCATTATAACAT  796

seq1  AAGCCTTTGCCACTTAGCTAAAGGTATTGAAGAAAGCACAAAATCCCTAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTGCCACTTAGCTAAAGGTATTGAAGAAAGCACAAAATCCCTAT  846

seq1  ATAGATAGCTTAGACCAAGGAGACAAAGTGTAGAGACTCAATCACACAAG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGCTTAGACCAAGGAGACAAAGTGTAGAGACTCAATCACACAAG  896

seq1  TTAAGTAGCCCGTAAATAAGAACTCTAAGAATTTAGTTCTTAGAAATAAC  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAGCCCGTAAATAAGAACTCTAAGAATTTAGTTCTTAGAAATAAC  946

seq1  AGCTACAGCCAACTTTCTCCATCTCTCACCACTAGGTTTGTGATGCTACG  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGCCAACTTTCTCCATCTCTCACCACTAGGTTTGTGATGCTACG  996

seq1  GAAATCATGGAATAGAATATTCTCTTAACTTGTAACCTTATTTCATGAAA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATGGAATAGAATATTCTCTTAACTTGTAACCTTATTTCATGAAA  1046

seq1  AGTTCAATCATCATTATGTTAATAGCCAGAGGAAATAAAATTAAGGTGAT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATCATCATTATGTTAATAGCCAGAGGAAATAAAATTAAGGTGAT  1096

seq1  AATGCTTATTCAGTGAACATTAAATCAAGATAATCCGGAAGCAAGAACTT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTATTCAGTGAACATTAAATCAAGATAATCCGGAAGCAAGAACTT  1146

seq1  TGTAACCACATCATAGTACTTATCTCAGCTAAAACAGCTATTAAGTTGTT  1185
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCACATCATAGTACTTATCTCAGCTAAAACAGCTATTAAGTTGTT  1196

seq1  GATGAATTC  1194
      |||||||||
seq2  GATGAATTC  1205


seq1: chr10_35697212_35698327
seq2: B6Ng01-236B15.g_68_1188

seq1  GAATTCTCTACAAACATTAGAGCTGACACATGTAAGGGAAAGAGAAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACAAACATTAGAGCTGACACATGTAAGGGAAAGAGAAAGAC  50

seq1  ATTACAGTGAGCTCAAAGATGTGGGAGGGGCAAGAAATGGATTTTCTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTGAGCTCAAAGATGTGGGAGGGGCAAGAAATGGATTTTCTTTC  100

seq1  AAAATCTCTCAAAAGAAACACAAAAGGCACATTGATTTCTTCTGAATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCTCAAAAGAAACACAAAAGGCACATTGATTTCTTCTGAATTCT  150

seq1  AGAGTGAGAAGATATTAAATTTGATTGCTTTAAAGTAATTTACTGTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGAAGATATTAAATTTGATTGCTTTAAAGTAATTTACTGTTATA  200

seq1  TCAGTCATGTGAACAGGATACAACATTTTTCTCATCTCTTTACATCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCATGTGAACAGGATACAACATTTTTCTCATCTCTTTACATCCAAA  250

seq1  TTCTGTTCATGATATTTTGTGGCTTTCATACAACGGAGCTTAACTTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTCATGATATTTTGTGGCTTTCATACAACGGAGCTTAACTTTTTC  300

seq1  TGTAGAATCTTTTTCTTAGTCTTGTGATGTTTAGAGAAGGAAGACATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATCTTTTTCTTAGTCTTGTGATGTTTAGAGAAGGAAGACATTTT  350

seq1  CTTAATTTAAATTTTACTTTTTATTTCCATCACTACTGTAATGTAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTAAATTTTACTTTTTATTTCCATCACTACTGTAATGTAAATAC  400

seq1  AACTGATATTCACATATTAATCTTAGATCACTTAATTGTGGGTAGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATATTCACATATTAATCTTAGATCACTTAATTGTGGGTAGTTTTT  450

seq1  GTATAATATTATCTTACCTATGAGTAAAAAAAAAAATGCTATTTCTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATATTATCTTACCTATGAGTAAAAAAAAAAATGCTATTTCTTTCA  500

seq1  TGTCTCCTGAGAAAAAGATGATCTTCTTTTAAACATTTGTTTTAAAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTGAGAAAAAGATGATCTTCTTTTAAACATTTGTTTTAAAATCT  550

seq1  TGTTTCAGAAATGTGTTGTTATACAGTATTTTGGACTTTGAATACTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGAAATGTGTTGTTATACAGTATTTTGGACTTTGAATACTTGGT  600

seq1  GCCCATCTTGTGAATCTATTTGTAGAAGTATAACCTGACTGGGGAAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCTTGTGAATCTATTTGTAGAAGTATAACCTGACTGGGGAAAGTA  650

seq1  TGTTTCAGGCCCATGGAGATAATTTATTTATTCCAGGCTACATCCTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGGCCCATGGAGATAATTTATTTATTCCAGGCTACATCCTATGT  700

seq1  TTCTCTTTTCTTAGAGACCTGAGCTATTCCCTAGGCCCCACACTACCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTCTTAGAGACCTGAGCTATTCCCTAGGCCCCACACTACCACC  750

seq1  AACACCACTACACACACACACACACACACACACACACACACACACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCACTACACACACACACACACACACACACACACACACACACACACA  800

seq1  CACACACACAAATGATGTACTGAACCCATCAAAACAATGTGCTTTCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAATGATGTACTGAACCCATCAAAACAATGTGCTTTCTTCA  850

seq1  AATTGTTTCCATCAGTTATTGTTACAGCAGCATTAAAGGTAATTAA--TA  898
      ||||||||||||||||||||||||||||||||||||||||||||||   |
seq2  AATTGTTTCCATCAGTTATTGTTACAGCAGCATTAAAGGTAATTAAATAA  900

seq1  AATAATCTAACTTT-CCTCTCCAGGAAC-AATAATTCTCGTGTAATTGTC  946
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  AATAATCTAACTTTCCCTCTCCAGGAACAAATAATTCTCGTGTAATTGTC  950

seq1  TTT--CACCATAGTAGCTTCAAAGACCTTTTCAGGGAAATAAAGAATGGC  994
      |||  |||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TTTTCCACCATAGTAGCTTCAAAGACCTTTTCA-GGAAATAAAGAAT-GC  998

seq1  ACAAAGGAAATTGAAGGAG-AAATAAATGTTATAAGATGAAGAAAATGTT  1043
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  ACAAAGGAAATTGAAGGAGAAAATAAATGTTATAGGATGAAGAAAATGTT  1048

seq1  TCCATCCAAGAGAGGAAGAAGATAATACAACT-GAGGAGCT-GAGTACCC  1091
      ||||||||||||||| ||||||  ||||| || |||||||| ||||| ||
seq2  TCCATCCAAGAGAGG-AGAAGAATATACACCTGGAGGAGCTGGAGTA-CC  1096

seq1  CAGACCTTTGATAACTTGTTTCATT  1116
      ||||||||||||| |||||||||||
seq2  CAGACCTTTGATACCTTGTTTCATT  1121


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