BAC Information

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BAC

Clone NameB6Ng01-237H06
Chromosome10 (Build37)
Map Location 76,435,154 - 76,592,419
singlet/doubletdoublet
Overlap geneLOC100041099, Slc19a1, Col18a1
Upstream geneEG333669, Suhw2, Slc5a4b, Slc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3
Downstream geneLOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237H06.bB6Ng01-237H06.g
ACCGA048407GA048408
length986657
definitionB6Ng01-237H06.b B6Ng01-237H06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,435,154 - 76,436,140)(76,591,910 - 76,592,419)
sequence
gaattctgcattttcatccgaaagctgctaggagaacactggcttccagg
cagctaggatgaaagtcttaaagcccatgcccacagtgacacacctactc
caggaggccacgcccactctaacaaggccacacctactacaacagagcca
caccttctaatagtgccactccctaggccaagcatattcacactattaca
ctatcaaaaggaaaattagagacgtacgaaacaagtgcagttggctgcag
tcatagatggcaattctcatttattttcttgagaagtctgcgaggaggaa
acctccttccccctccttgagcccccaactataaaacaggaaagagagaa
gtctggtttgggggctggcaggagagtcaaatgaagagacctgcattacc
aatacttggcatatagcagctcccatctgaaggctctcctctacccaggc
agaactgcttgagtccccaacagtgagctgcctccccctgcagatggacc
catcaccctaatcatggtgaaggtgagtgaaaggaatcacagaacagctg
atgtaacatctcatgttatacaaatgcaagtgcaatatttctgccttata
tttttccagaacttgctctcgaagacacagactgaagccattcccctggg
ctctactgcccctattcaaagaatgtgacccaccagaccctgagccaggc
tagaacggacagcatttgcctctccagttcctctcagctctctggggtct
gaaccactgtgtgaaactgttagtctgcactgccatcctgacaataactt
gtggaagtacagcaagccagtaggcagcattcttccatggctcctgcctc
cgtgttcctaccttgaggaactgcctgacttccctcaaaggtggagtggg
acccgaaggcataaagtgaaataaacccctttcctttcccaagtcagctt
tggtcagtttcttctctcctctcctcctcctccttc
gaattcttcaccacagatcccagacctcctgtggttggtcactttctagc
aaagagttagtgccatcatattctctctctctctccctcccccctctttc
tctctctctctccctctctccatgtctctccacctgatctttaagcaggc
tttctctagggaactctgaggagggtgatatgtagatccaggctgagcat
cactagcctctgttgagtgagtagtgtctttctttctttctttctttctt
tctttctttctttctttctttctttctttctttctttctttctttctttc
tttctttctttctttccttcttcatcactagcctctgttgagtgagtagt
gtctttctttctttctttctttctttctttctttctttctctctttctcc
ctttctttctttccttccttccttccttccttccttccttccttccttcc
ttctttccttctttccttctttccttcttttgtttgtttttgttttctga
gacagggtttctctgtgtagccctggctgtcctggaactcactctgtaga
gcaggctggccttgaactcagaaatctgcctgcctatgcctcccgagtac
tgggattaaaggtgtgcaccaccatgcccagccagtgtttcttttctatc
ccacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_76435154_76436140
seq2: B6Ng01-237H06.b_45_1030

seq1  GAATTCTGCATTTTCATCCGAAAGCTGCTAGGAGAACACTGGCTTCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCATTTTCATCCGAAAGCTGCTAGGAGAACACTGGCTTCCAGG  50

seq1  CAGCTAGGATGAAAGTCTTAAAGCCCATGCCCACAGTGACACACCTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGGATGAAAGTCTTAAAGCCCATGCCCACAGTGACACACCTACTC  100

seq1  CAGGAGGCCACGCCCACTCTAACAAGGCCACACCTACTACAACAGAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGCCACGCCCACTCTAACAAGGCCACACCTACTACAACAGAGCCA  150

seq1  CACCTTCTAATAGTGCCACTCCCTAGGCCAAGCATATTCACACTATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTAATAGTGCCACTCCCTAGGCCAAGCATATTCACACTATTACA  200

seq1  CTATCAAAAGGAAAATTAGAGACGTACGAAACAAGTGCAGTTGGCTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAAAGGAAAATTAGAGACGTACGAAACAAGTGCAGTTGGCTGCAG  250

seq1  TCATAGATGGCAATTCTCATTTATTTTCTTGAGAAGTCTGCGAGGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATGGCAATTCTCATTTATTTTCTTGAGAAGTCTGCGAGGAGGAA  300

seq1  ACCTCCTTCCCCCTCCTTGAGCCCCCAACTATAAAACAGGAAAGAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTCCCCCTCCTTGAGCCCCCAACTATAAAACAGGAAAGAGAGAA  350

seq1  GTCTGGTTTGGGGGCTGGCAGGAGAGTCAAATGAAGAGACCTGCATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTTGGGGGCTGGCAGGAGAGTCAAATGAAGAGACCTGCATTACC  400

seq1  AATACTTGGCATATAGCAGCTCCCATCTGAAGGCTCTCCTCTACCCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGGCATATAGCAGCTCCCATCTGAAGGCTCTCCTCTACCCAGGC  450

seq1  AGAACTGCTTGAGTCCCCAACAGTGAGCTGCCTCCCCCTGCAGATGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGCTTGAGTCCCCAACAGTGAGCTGCCTCCCCCTGCAGATGGACC  500

seq1  CATCACCCTAATCATGGTGAAGGTGAGTGAAAGGAATCACAGAACAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCTAATCATGGTGAAGGTGAGTGAAAGGAATCACAGAACAGCTG  550

seq1  ATGTAACATCTCATGTTATACAAATGCAAGTGCAATATTTCTGCCTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAACATCTCATGTTATACAAATGCAAGTGCAATATTTCTGCCTTATA  600

seq1  TTTTTCCAGAACTTGCTCTCGAAGACACAGACTGAAGCCATTCCCCTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCAGAACTTGCTCTCGAAGACACAGACTGAAGCCATTCCCCTGGG  650

seq1  CTCTACTGCCCCTATTCAAAGAATGTGACCCACCAGACCCTGAGCCAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTGCCCCTATTCAAAGAATGTGACCCACCAGACCCTGAGCCAGGC  700

seq1  TAGAACGGACAGCATTTGCCTCTCCAGTTCCTCTCAGCTCTCTGGGGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACGGACAGCATTTGCCTCTCCAGTTCCTCTCAGCTCTCTGGGGTCT  750

seq1  GAACCACTGTGTGAAACTGTTAGTCTGCACTGCCATCCTGACAATAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACTGTGTGAAACTGTTAGTCTGCACTGCCATCCTGACAATAACTT  800

seq1  GTGGAAGTACAGCAAGCCAGTAGGCAGCATTCTTCCATGGCTCCTGCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGTACAGCAAGCCAGTAGGCAGCATTCTTCCATGGCTCCTGCCTC  850

seq1  CGTGTTCCTACCTTGAGGAACTGCCTGACTTCCCTCAAAGGTGGAGTGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCCTACCTTGAGGAACTGCCTGACTTCCCTCAAAGGTGGAGTGGG  900

seq1  ACCCGAAGGCATAAGGTGAAATAAA-CCCTTTCCTTTCCCAAGTCAGCTT  949
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  ACCCGAAGGCATAAAGTGAAATAAACCCCTTTCCTTTCCCAAGTCAGCTT  950

seq1  TGGTCAGTTTCTTCTTCTCCTCCTCCTCCTCCTCCTTC  987
      |||||||||||||| |||||| ||||||||||||||||
seq2  TGGTCAGTTTCTTC-TCTCCT-CTCCTCCTCCTCCTTC  986

seq1: chr10_76591910_76592419
seq2: B6Ng01-237H06.g_199_720 (reverse)

seq1  CATGTGGGATAGAAAAGAAACACTGGCTGGGCATGGTGGTGCACACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGATAGAAAAGAAACACTGGCTGGGCATGGTGGTGCACACCTTT  50

seq1  AATCCCAGTACTCGGGAGGCATAGGCAGGCAGATTTCTGAGTTCAAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGTACTCGGGAGGCATAGGCAGGCAGATTTCTGAGTTCAAGGCC  100

seq1  AGCCTGCTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAA  150

seq1  CCCTGTCTCAGAAAACAAAAACAAACAAAAGAAGGAAAGAAGGAAAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAGAAAACAAAAACAAACAAAAGAAGGAAAGAAGGAAAGAAG  200

seq1  GAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAAGA  250

seq1  AAGAAAGGGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  300

seq1  GAAAGACACTACTCACTCAACAGAGGCTAGTGATGAAGAAG---------  341
      |||||||||||||||||||||||||||||||||||||||||         
seq2  GAAAGACACTACTCACTCAACAGAGGCTAGTGATGAAGAAGGAAAGAAAG  350

seq1  ---GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  388
         |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  400

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACACTACTCACTCAACAGAG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGACACTACTCACTCAACAGAG  450

seq1  GCTAGTGATGCTCAGCCTGGATCTACATATCACCCTCCTCAGAGTTCCCT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGATGCTCAGCCTGGATCTACATATCACCCTCCTCAGAGTTCCCT  500

seq1  AGAGAAAGCCTGCTTAAAGATC  510
      ||||||||||||||||||||||
seq2  AGAGAAAGCCTGCTTAAAGATC  522