BAC Information

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BAC

Clone NameB6Ng01-238K14
Chromosome10 (Build37)
Map Location 103,497,032 - 103,498,166
singlet/doubletsinglet
Overlap genenone
Upstream geneLrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238K14.bB6Ng01-238K14.g
ACCGA049297GA049298
length1,1321,148
definitionB6Ng01-238K14.b B6Ng01-238K14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaaaactcattcgtctccttaaataactttaatgttccatag
caaaaatgagggcgcagaattctcagtctctgattggcttttctgccacc
atctatgtaaaatttcctcattatcctgctcttcaataggagaaaggtta
caatttttacagtacacaggctacatagatgcatttttattaccctaagt
ccatcagtagccttaggtttcacttttggtgttgttcattatggatctaa
acaacttaacttcttatcatccccatggctcttacacttctaaaaggtgg
taaggtcataaaagcaggtaattcgtattcatttaaagttggaaattggc
gtacttattccattttatttcgctctaattccatagtttagcctatctgt
ataattttctattgtctggatttatcaatgagactttcacttgaaaaaca
gaatcttgggtgctttcaagttttgaccaatatttaagttttcacacaga
tttttatgtagacatatttttaagtgatttgacaaactctccttgaatac
tgagaatgcctgtagactttccaagccactatatcatcttcaaagtcccc
ttctctttttttgcatttgatgttgattgtttgaagtatagcaatttaaa
taacttaggagtagactctcactacagtgttattttagcttctccaggga
tagatgatgcagaatatatctatcaatacttatttgtcatttgtgtttat
ttttaaagtatctgttacaacttgtacttatttttaatcgagtgttctca
tgttaaattatagccatgtggcaataaatagatacagatgcagatacaca
catgtgaagaacttctccaatctacttcattaaattttaatgtatggaac
atatgatgaaatctatacacttaacatgaatagtaggactgtagatttcc
tcatcccaaataaacagcttttactctctcttcaaattctttccttctct
tgctttcccatttaagctgatggcatcctgctctaggatctgctgtgcag
aatgcctttcacaatatcatcgctgtcattattatgataacattataaaa
tgatcagtatcataattttcataacatagcaa

gaattccattaaaatcagggacaagacaagactgtccactctcttcccta
tttattcaatacagtatttgaagttctagctagagcaataagacaactaa
agagatcaagtggatagaaattgggaagcaggagtaaagcattactattt
gtgtatgatatgatagtacactttctaccagagaactcctacagctgata
aacaccttcagcaaagtgtctggatatacaactaacaaatattcagtagt
caacctatatacaaatgataaaaggatcaagaaagaaattagggaaacaa
caccctttacaatagccacaaataatatactataaaaacaagtgaaaggc
ctatatgacaagaacttcagtttcctaaaaaataaattgaagaagatatt
tggagatagaaagatcacctatgctcatggatcagtaggattaatatagt
gaagatggccatcctaccaaaaacaatttatagattcaatgcaattccca
tcaaaattattcaatatttaaaaacatgaaagaacaaatctcaacttcat
atgaaaaaaaaaaaaaccacagtatatctaaaacaattctgaacaataag
aaaatttctgcgtatcagattttgacatgtgatatgcaggatacataata
ggtgactcccctgtaaactagtcattccatccctaaaagggccatcacac
acaggctgagaaatactgctctagacactcctgtgcagaaaaatcaactg
attcatcactgtctgttgtatgttggcttttattaatttgaattaaaaaa
aatctatcagaacatagtaccttgaagatattagtatcagccaatacttt
tttattaccaaaacccttggcacatgattttactgaaactcaaactgaat
ccgttcttatgtgttccatgtctaaatactggatttctgatatcattaaa
aggtaccagagtagtactatgatttgatgtatatactagcaagctctata
tcaacagtgtatgagggcctcacactgatgagtagccccagtagtatcat
gagtatggaatacgggcctgttattctggatgaaatatcagaattggata
gtcttcatttcattttcagagtacagatctactggaagaagattgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103497032_103498166
seq2: B6Ng01-238K14.b_43_1174

seq1  GAATTCAAGAAAACTCATTCGTCTCCTTAAATAACTTTAATGTTCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAACTCATTCGTCTCCTTAAATAACTTTAATGTTCCATAG  50

seq1  CAAAAATGAGGGCGCAGAATTCTCAGTCTCTGATTGGCTTTTCTGCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAGGGCGCAGAATTCTCAGTCTCTGATTGGCTTTTCTGCCACC  100

seq1  ATCTATGTAAAATTTCCTCATTATCCTGCTCTTCAATAGGAGAAAGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTAAAATTTCCTCATTATCCTGCTCTTCAATAGGAGAAAGGTTA  150

seq1  CAATTTTTACAGTACACAGGCTACATAGATGCATTTTTATTACCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTACAGTACACAGGCTACATAGATGCATTTTTATTACCCTAAGT  200

seq1  CCATCAGTAGCCTTAGGTTTCACTTTTGGTGTTGTTCATTATGGATCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGTAGCCTTAGGTTTCACTTTTGGTGTTGTTCATTATGGATCTAA  250

seq1  ACAACTTAACTTCTTATCATCCCCATGGCTCTTACACTTCTAAAAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTAACTTCTTATCATCCCCATGGCTCTTACACTTCTAAAAGGTGG  300

seq1  TAAGGTCATAAAAGCAGGTAATTCGTATTCATTTAAAGTTGGAAATTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCATAAAAGCAGGTAATTCGTATTCATTTAAAGTTGGAAATTGGC  350

seq1  GTACTTATTCCATTTTATTTCGCTCTAATTCCATAGTTTAGCCTATCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTATTCCATTTTATTTCGCTCTAATTCCATAGTTTAGCCTATCTGT  400

seq1  ATAATTTTCTATTGTCTGGATTTATCAATGAGACTTTCACTTGAAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCTATTGTCTGGATTTATCAATGAGACTTTCACTTGAAAAACA  450

seq1  GAATCTTGGGTGCTTTCAAGTTTTGACCAATATTTAAGTTTTCACACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGGGTGCTTTCAAGTTTTGACCAATATTTAAGTTTTCACACAGA  500

seq1  TTTTTATGTAGACATATTTTTAAGTGATTTGACAAACTCTCCTTGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTAGACATATTTTTAAGTGATTTGACAAACTCTCCTTGAATAC  550

seq1  TGAGAATGCCTGTAGACTTTCCAAGCCACTATATCATCTTCAAAGTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGCCTGTAGACTTTCCAAGCCACTATATCATCTTCAAAGTCCCC  600

seq1  TTCTCTTTTTTTGCATTTGATGTTGATTGTTTGAAGTATAGCAATTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTTTTGCATTTGATGTTGATTGTTTGAAGTATAGCAATTTAAA  650

seq1  TAACTTAGGAGTAGACTCTCACTACAGTGTTATTTTAGCTTCTCCAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAGGAGTAGACTCTCACTACAGTGTTATTTTAGCTTCTCCAGGGA  700

seq1  TAGATGATGCAGAATATATCTATCAATACTTATTTGTCATTTGTGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATGCAGAATATATCTATCAATACTTATTTGTCATTTGTGTTTAT  750

seq1  TTTTAAAGTATCTGTTACAACTTGTACTTATTTTTAATCGAGTGTTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTATCTGTTACAACTTGTACTTATTTTTAATCGAGTGTTCTCA  800

seq1  TGTTAAATTATAGCCATGTGGCAATAAATAGATACAGATGCAGATACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATTATAGCCATGTGGCAATAAATAGATACAGATGCAGATACACA  850

seq1  CATGTGAAGAACTTCTCCAATCTACTTCATTAAATTTTAATGTATGGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAGAACTTCTCCAATCTACTTCATTAAATTTTAATGTATGGAAC  900

seq1  ATATGATGAAATCTATACACTTAACATGAATAGTAGGACTGTAGATTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGAAATCTATACACTTAACATGAATAGTAGGACTGTAGATTTCC  950

seq1  TCATCCCAAAT-AACAGCTTTTACTCTCTCTTCAAATTCTTTCCTTCCTC  999
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  TCATCCCAAATAAACAGCTTTTACTCTCTCTTCAAATTCTTTCCTT-CTC  999

seq1  TTGCTTTCCCCATTTAAGCTGATGGCATCCTGCTCTAGGATCTGCTGTGC  1049
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTT-CCCATTTAAGCTGATGGCATCCTGCTCTAGGATCTGCTGTGC  1048

seq1  AGAATGCCTTTCAC-ATATCATCGCTGTTCATTATTATGATTAACATTAT  1098
      |||||||||||||| |||||||||||| |||||||||||| |||||||| 
seq2  AGAATGCCTTTCACAATATCATCGCTG-TCATTATTATGA-TAACATTA-  1095

seq1  TAAAATGATCAGTATCATATTTTCAATTACATAGCAA  1135
      ||||||||||||||||||| |||  || |||||||||
seq2  TAAAATGATCAGTATCATAATTTTCATAACATAGCAA  1132


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