This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-240E10
Chromosome
10 (Build37)
Map Location
37,965,908 - 37,966,929
singlet/doublet
singlet
Overlap gene
none
Upstream gene
none
Downstream gene
LOC100040915
,
Lama4
,
1700025K23Rik
,
Tube1
,
EG624165
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100040915
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040915
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
Lama4
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:16775
MGI:109321
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
1700025K23Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:66337
MGI:1913587
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Tube1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:71924
MGI:1919174
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
EG624165
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:624165
MGI:3647945
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 1 Protein
pseudo
: _no_value
name
Lama4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142367454
GeneID:16775
MGI:109321
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: laminin, alpha 4
transcript_id
: NM_010681.2
name
1700025K23Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:34304029
GeneID:66337
MGI:1913587
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA 1700025K23 gene
transcript_id
: NM_183254.1
name
Tube1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:110625787
GeneID:71924
MGI:1919174
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: epsilon-tubulin 1
transcript_id
: NM_028006.2
name
Lama4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:46275826
GeneID:16775
MGI:109321
definition
GO_component
: GO:0005605 - basal lamina [Evidence IDA]; GO:0005604 - basement membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005606 - laminin-1 [Evidence IEA]
GO_function
: GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0005102 - receptor binding [Evidence IEA]
GO_process
: GO:0001568 - blood vessel development [Evidence IMP]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0030155 - regulation of cell adhesion [Evidence IEA]; GO:0030334 - regulation of cell migration [Evidence IEA]; GO:0045995 - regulation of embryonic development [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: laminin [a]4
product
: laminin, alpha 4
protein_id
: NP_034811.1
name
1700025K23Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:34304030
CCDS:CCDS23786.1
GeneID:66337
MGI:1913587
definition
codon_start
: 1
product
: hypothetical protein LOC66337
protein_id
: NP_899077.1
name
Tube1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:58037275
CCDS:CCDS23787.1
GeneID:71924
MGI:1919174
definition
GO_component
: GO:0005874 - microtubule [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA]
GO_function
: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA]
GO_process
: GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0051258 - protein polymerization [Evidence IEA]
codon_start
: 1
product
: epsilon-tubulin 1
protein_id
: NP_082282.1
name
LOC100040915
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100040915
definition
number
: 1
pseudo
: _no_value
name
LOC100040915
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100040915
definition
number
: 2
pseudo
: _no_value
name
EG624165
(CDS detail)
type
misc_RNA
link
vega
ensembl
MGI
NCBI
xref
GI:149260688
GeneID:624165
MGI:3647945
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 1440 ESTs, 1 Protein
product
: predicted gene, EG624165
pseudo
: _no_value
transcript_id
: XR_032300.1
clone name
MSMg01-393H23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-046E06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-444P03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-317N22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-379C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-369K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-360O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076E03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521N21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-393C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-180N16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435D07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-317D19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-493O15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-547M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-137C07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-175E06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530N15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-084J24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-432H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-152O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-267H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-158P18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-485P10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-432J15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-481N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-512O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415P08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536K13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430P04
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-349J02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-420L09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-138O07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-410H16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440M11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495H01
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-453A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488A06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-149M15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-155N04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-132L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360B07
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-214B12
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-119F18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-152M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-269E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-048D24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-364B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-196J14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-540H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-431I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-326N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151F06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415K04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-496M07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530B17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-474I05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-089C18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-386D15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-302A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-439L08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-431F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-272M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-211L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-506D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-136B23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-411O04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-176P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-048K07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-417J11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158J18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-512N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181I04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-185C12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521O01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380I10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-273P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-182O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482D09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-480G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-045L24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247L09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280C18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-182D11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005N17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-041I17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-025A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-207G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-317A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301F20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094M07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-222E03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-044F05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-331K22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-296O07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321G15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272P02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-054A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275I12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-336F10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186D18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-244I06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295I11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258F15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-051F05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079C07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077O23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-112P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-159C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-007P17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-053C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-266I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-046C13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-006P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016J04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-213F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337P05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-059M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-216N04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-342D17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-311N17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-184K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038A18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-260F09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030E04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-293N19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-140F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289F24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-097I01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-139B04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307B15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240E10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113B08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-032O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-314J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-317A12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-262F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-177G20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-295F08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129I04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-050P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-174M05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-072D11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-156J07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-074L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-218E01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126L16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-328P07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-049E22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043H16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262N18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-047K02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-276C04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-128P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-066P02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-099N01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-096L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-215G21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076F13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-294C02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-033A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-282L03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106D24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043C08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302A09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-123L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-335D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252O01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-256J03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-014L04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-299B23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-188C16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-112I07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-133B08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169F08
singlet/doublet
doublet
plural/unique
unique