BAC Information

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BAC

Clone NameB6Ng01-240I21
Chromosome10 (Build37)
Map Location 24,021,736 - 24,199,201
singlet/doubletdoublet
Overlap geneMoxd1
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240I21.bB6Ng01-240I21.g
ACCGA050694GA050695
length1,221530
definitionB6Ng01-240I21.b B6Ng01-240I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,197,981 - 24,199,201)(24,021,736 - 24,022,272)
sequence
gaattcattcctgggactgtttgcattctttcccagtgaacgccagggca
gacatcagactctatttataacagcagaggagatattcaacctttcagag
cggtactcagaatcgaggctgctcgagagcgagtgggtagaatctctatg
tgccttttcccaacaagtgtgcattccctttcggggtagaggtgaccccg
tggcaagcctgggagaacctatctcaggaacaacatgtggcctagagatg
gaaggagcgggatggaaaccatacatggtgaagtgaaaaagatggtcttc
cttgcgttgccgctgaactcggcaggtttacttcagtgccccaagagtaa
acagagctggaatcacactgtcatgctgtgggttcatggaaaagtgcctg
aggggctctaaatgctcttgtgtgctacctctcagcccttgagcactccg
acttcagaaatccttactggggcatagtagtgtctgagccttgtgtgagt
gcagatagactgttctgcttgttcaagaggtaaggtagaggagagttcac
actgaacatcatgatgtttcagatggctgggatcagaacacagaggtgag
taattgcagagctcagaaggctgaagcactggatcagctagagttggaag
ccagccttggcctcagagcaacactcagcctcagcaaacagccatagaga
gcaaagtccacaacttaaagtcttctttaggaggagaaatgagtcaggca
cataatcaagttaccttgtctaacatagacagaatgcaactaccttgctt
actaccatggacacttatactagcaacacaaccgtttcttctgccttcct
gtctcccggcccaagggtaactttcattgagaaatgtcaattaaaagcaa
agatgacaagggaaatgttggtatggtattggtgccatggtaccaatgtc
ctggtcattccatctgctggatctgggtttcctgcagcagctaagggaga
gctaggtggattagtggctccttagtacaaataaagaaaaaggttctcct
tcaggttaaaagggatgatggtgctgctgttatacaataggcaaacatac
tggcttaagcacaatgtagaactacaggatcctttaatatggaagcttcc
tgattggtacttgaatacataggaactggcctgaataagagtagcccgtg
ttcttacaagtctggaacctg
catgtgatttcaacatgacactcaacatccttctcacaaacatgctgacc
ttaataacactagtggacttactctccgatcccatttgctcttcatcctt
tctgggtgtaactcgccagggtgagcatagccctctcttcgacaggtccc
agtccctgtggtttctctgattttactcatggtcctctgacctcagtgtt
tatctctgcatctttggcttcctccatccaccaagtctgttgatacccaa
gcccacatcaaagtatttcccagtctttctagcactgtccagccgaatgt
gtttcttactctacaactctcttaaagaagagagatgtgagtaagtgtgg
ggatgatgggggctgattgttaactggggaagaaaatggagagcagtgaa
gggttctagatggggtgagatccccaagacaggatgcagggccacagggt
ctgtaaggttcctcaccactcattgctaccctctgggtcgatttgagtcc
catgtcctattacagattctttttatatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24197981_24199201
seq2: B6Ng01-240I21.b_47_1267 (reverse)

seq1  CAAGTTCCAGATTTGTAAGAACA--GGCTACTC-TAATCAGGCCAGGTCT  47
      || |||||||| |||||||||||  |||||||| || ||||||||| || 
seq2  CAGGTTCCAGACTTGTAAGAACACGGGCTACTCTTATTCAGGCCAGTTCC  50

seq1  CATAGTATCAAATGTTTACAAAATTCAAGGAAAACCTTTCACTATTAAAG  97
       || ||||  ||    ||| ||  ||| |   || ||| || ||||||||
seq2  TAT-GTATTCAA---GTACCAA--TCAGG---AAGCTTCCA-TATTAAAG  90

seq1  ATTCCTGTAG-TCTACCATTGTGCCTAAGCCAGTATGTTTGCCTATTGTA  146
        |||||||| |||| |||||||| |||||||||||||||||||||||||
seq2  GATCCTGTAGTTCTA-CATTGTGCTTAAGCCAGTATGTTTGCCTATTGTA  139

seq1  T-ACAGCAGCACCATCAT-CCTTTTAAACTGA--GAGAACC-TTTTCTTT  191
      | |||||||||||||||| |||||||| ||||  ||||||| ||||||||
seq2  TAACAGCAGCACCATCATCCCTTTTAACCTGAAGGAGAACCTTTTTCTTT  189

seq1  A-TTGTACTAAGGAGCCACTAAACCACCTAGCTCTCCC-TAGCTGCTGCA  239
      | |||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  ATTTGTACTAAGGAGCCACTAATCCACCTAGCTCTCCCTTAGCTGCTGCA  239

seq1  GGAAACCCAGATCCAGCAGATGGAATGACCAGGACATTGGTACCATGGCA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCCAGATCCAGCAGATGGAATGACCAGGACATTGGTACCATGGCA  289

seq1  CCAATACCATACCAACATTTCCCTTGTCATCTTTGCTTTTAATTGACATT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACCATACCAACATTTCCCTTGTCATCTTTGCTTTTAATTGACATT  339

seq1  TCTCAATGAAAGTTACCCTTGGGCCGGGAGACAGGAAGGCAGAAGAAACG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATGAAAGTTACCCTTGGGCCGGGAGACAGGAAGGCAGAAGAAACG  389

seq1  GTTGTGTTGCTAGTATAAGTGTCCATGGTAGTAAGCAAGGTAGTTGCATT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTGCTAGTATAAGTGTCCATGGTAGTAAGCAAGGTAGTTGCATT  439

seq1  CTGTCTATGTTAGACAAGGTAACTTGATTATGTGCCTGACTCATTTCTCC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATGTTAGACAAGGTAACTTGATTATGTGCCTGACTCATTTCTCC  489

seq1  TCCTAAAGAAGACTTTAAGTTGTGGACTTTGCTCTCTATGGCTGTTTGCT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAGAAGACTTTAAGTTGTGGACTTTGCTCTCTATGGCTGTTTGCT  539

seq1  GAGGCTGAGTGTTGCTCTGAGGCCAAGGCTGGCTTCCAACTCTAGCTGAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGAGTGTTGCTCTGAGGCCAAGGCTGGCTTCCAACTCTAGCTGAT  589

seq1  CCAGTGCTTCAGCCTTCTGAGCTCTGCAATTACTCACCTCTGTGTTCTGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTTCAGCCTTCTGAGCTCTGCAATTACTCACCTCTGTGTTCTGA  639

seq1  TCCCAGCCATCTGAAACATCATGATGTTCAGTGTGAACTCTCCTCTACCT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCCATCTGAAACATCATGATGTTCAGTGTGAACTCTCCTCTACCT  689

seq1  TACCTCTTGAACAAGCAGAACAGTCTATCTGCACTCACACAAGGCTCAGA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTTGAACAAGCAGAACAGTCTATCTGCACTCACACAAGGCTCAGA  739

seq1  CACTACTATGCCCCAGTAAGGATTTCTGAAGTCGGAGTGCTCAAGGGCTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTATGCCCCAGTAAGGATTTCTGAAGTCGGAGTGCTCAAGGGCTG  789

seq1  AGAGGTAGCACACAAGAGCATTTAGAGCCCCTCAGGCACTTTTCCATGAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGCACACAAGAGCATTTAGAGCCCCTCAGGCACTTTTCCATGAA  839

seq1  CCCACAGCATGACAGTGTGATTCCAGCTCTGTTTACTCTTGGGGCACTGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCATGACAGTGTGATTCCAGCTCTGTTTACTCTTGGGGCACTGA  889

seq1  AGTAAACCTGCCGAGTTCAGCGGCAACGCAAGGAAGACCATCTTTTTCAC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACCTGCCGAGTTCAGCGGCAACGCAAGGAAGACCATCTTTTTCAC  939

seq1  TTCACCATGTATGGTTTCCATCCCGCTCCTTCCATCTCTAGGCCACATGT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATGTATGGTTTCCATCCCGCTCCTTCCATCTCTAGGCCACATGT  989

seq1  TGTTCCTGAGATAGGTTCTCCCAGGCTTGCCACGGGGTCACCTCTACCCC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGAGATAGGTTCTCCCAGGCTTGCCACGGGGTCACCTCTACCCC  1039

seq1  GAAAGGGAATGCACACTTGTTGGGAAAAGGCACATAGAGATTCTACCCAC  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAATGCACACTTGTTGGGAAAAGGCACATAGAGATTCTACCCAC  1089

seq1  TCGCTCTCGAGCAGCCTCGATTCTGAGTACCGCTCTGAAAGGTTGAATAT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCTCGAGCAGCCTCGATTCTGAGTACCGCTCTGAAAGGTTGAATAT  1139

seq1  CTCCTCTGCTGTTATAAATAGAGTCTGATGTCTGCCCTGGCGTTCACTGG  1189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGCTGTTATAAATAGAGTCTGATGTCTGCCCTGGCGTTCACTGG  1189

seq1  GAAAGAATGCAAACAGTCCCAGGAATGAATTC  1221
      ||||||||||||||||||||||||||||||||
seq2  GAAAGAATGCAAACAGTCCCAGGAATGAATTC  1221

seq1: chr10_24021736_24022272
seq2: B6Ng01-240I21.g_66_601

seq1  GAATTCCATGTGATTTCAACATGACACTCAACATCCTTCTCACAAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTGATTTCAACATGACACTCAACATCCTTCTCACAAACATG  50

seq1  CTGACCTTAATAACACTAGTGGACTTACTCTCCGATCCCATTTGCTCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTAATAACACTAGTGGACTTACTCTCCGATCCCATTTGCTCTTC  100

seq1  ATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTCTCTTCGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTGGGTGTAACTCGCCAGGGTGAGCATAGCCCTCTCTTCGACA  150

seq1  GGTCCCAGTCCCTGTGGTTTCTCTGATTTTACTCATGGTCCTCTGACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCAGTCCCTGTGGTTTCTCTGATTTTACTCATGGTCCTCTGACCTC  200

seq1  AGTGTTTATCTCTGCATCTTTGGCTTCCTCCATCCACCAAGTCTGTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTATCTCTGCATCTTTGGCTTCCTCCATCCACCAAGTCTGTTGAT  250

seq1  ACCCAAGCCCACATCAAAGTATTTCCCAGTCTTTCTAGCACTGTCCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCCCACATCAAAGTATTTCCCAGTCTTTCTAGCACTGTCCAGCC  300

seq1  GAATGTGTTTCTTACTCTACAACTCTCTTAAAGAAGAGAGATGTGAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTTTCTTACTCTACAACTCTCTTAAAGAAGAGAGATGTGAGTAA  350

seq1  GTGTGGGGATGATGGGGGCTGATTGTTAACTGGGGAAGAAAATGGAGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGATGATGGGGGCTGATTGTTAACTGGGGAAGAAAATGGAGAGC  400

seq1  AGTGAAGGGTTCTAGATGGGGTGAGATCCCCAAGACAGGAGGCAGGGCCA  450
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTGAAGGGTTCTAGATGGGGTGAGATCCCCAAGACAGGATGCAGGGCCA  450

seq1  CAGGGTCTGTAAGGTTCCTCACCACTCAGTGCTACCCTCTGGGTCGATCT  500
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  CAGGGTCTGTAAGGTTCCTCACCACTCATTGCTACCCTCTGGGTCGATTT  500

seq1  GAGTCCCATGTCCTATAACAGATTCATTTTTATATTA  537
      |||||||||||||||| |||||||| |||||||||||
seq2  GAGTCCCATGTCCTATTACAGATTC-TTTTTATATTA  536