BAC Information

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BAC

Clone NameB6Ng01-241C07
Chromosome10 (Build37)
Map Location 111,158,738 - 111,304,038
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
Downstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241C07.bB6Ng01-241C07.g
ACCGA051135GA051136
length1,051105
definitionB6Ng01-241C07.b B6Ng01-241C07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,302,984 - 111,304,038)(111,158,738 - 111,158,842)
sequence
gaattcctaggaaagagactagtgcccttatttttaaaataaaataatat
aaaataaaatccaagtcttgggccaagagacagtggtagattactccatt
aacatgtgcaaaacactaggttcgaattctagcatcagaaagaagaagac
aagacaaggttttgcaaataataataataataatagacccaatgaaaaga
tctcttcccacctctgccataccggaacccagaaagaaggtaccaactaa
gaatcaataagcaactgcttgccaaatcttcccaagcttttgattttaga
cttcagtacctagaactaagaaaatttaacttctattttctataaactgc
ctagcctgtggtctattttttttactagcatgcccaacagactaagactt
acctaggatttaccatgggtaacagtagatgagacttcttaagactcaaa
gattaagaatactgtcataaccgagtaatgccagcacttgggaagcagag
acaggcagatctcggagtctgaggacagcctggcctatatattgggttct
gggacaaccagagctacataatgaaaccttgtcttggaaaaaaaaaaaaa
agaatattgtcacaccccacattacttggttgttgggttgcgcttgtctg
cgagtgttaggggtgtagcctacttaagctcccctagatcttatagaagt
cctccagttttggcttcctgaattctgggactaaaagcatgagttaccat
gtaccctgattcaggctgtatttgaacttaggaacaaagccagctggacc
cacaagtgagaaagaatttgagatcttccagtgagtggctaaactcatac
tagactgactgctcagtcccaactgccttttaagacagcgtccactgcgg
ccctgttccatcatggatacactgttccagatgagagtactgctctctct
ctctttatctttctctgtcttctccctctccctttctccttctctccctc
ttcttcttccctctacttcctcctcttctctttccccttctcctcctttc
c
ataatgaggtataagaaaggctgtcttataattgcctgtcacatggacaa
tgggttatgcatttgtgtgtatgagaaagagatggggagagggagggagg
ggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111302984_111304038
seq2: B6Ng01-241C07.b_47_1097 (reverse)

seq1  GGGAAGGAGGAGA--GGGGAAGAGAAGGAGAGGGAAGTAGGAGGGAAGAA  48
      || ||||||||||  ||| ||||||| |||  ||||||| ||||||||||
seq2  GGAAAGGAGGAGAAGGGGAAAGAGAA-GAGGAGGAAGTA-GAGGGAAGAA  48

seq1  GAGAGGGGAGAGGAAGGAGGAAGGGGAGAGGGAGAAGGACAGAGAAAGAT  98
      ||   |||||| |||||| ||| ||||||||||||| |||||||||||||
seq2  GAAGAGGGAGA-GAAGGA-GAAAGGGAGAGGGAGAA-GACAGAGAAAGAT  95

seq1  AAAGAGAGAGAGAGCAGTTACTCTCATCTGGAACAGTGTATCCATGATGG  148
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAGAGAGCAG-TACTCTCATCTGGAACAGTGTATCCATGATGG  144

seq1  AACAGGGCCGCAGTGGACGCTGTCTTAAAAGGCAGTTGGGACTGAGCAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGCCGCAGTGGACGCTGTCTTAAAAGGCAGTTGGGACTGAGCAGT  194

seq1  CAGTCTAGTATGAGTTTAGCCACTCACTGGAAGATCTCAAATTCTTTCTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTAGTATGAGTTTAGCCACTCACTGGAAGATCTCAAATTCTTTCTC  244

seq1  ACTTGTGGGTCCAGCTGGCTTTGTTCCTAAGTTCAAATACAGCCTGAATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGGGTCCAGCTGGCTTTGTTCCTAAGTTCAAATACAGCCTGAATC  294

seq1  AGGGTACATGGTAACTCATGCTTTTAGTCCCAGAATTCAGGAAGCCAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACATGGTAACTCATGCTTTTAGTCCCAGAATTCAGGAAGCCAAAA  344

seq1  CTGGAGGACTTCTATAAGATCTAGGGGAGCTTAAGTAGGCTACACCCCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGACTTCTATAAGATCTAGGGGAGCTTAAGTAGGCTACACCCCTA  394

seq1  ACACTCGCAGACAAGCGCAACCCAACAACCAAGTAATGTGGGGTGTGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCGCAGACAAGCGCAACCCAACAACCAAGTAATGTGGGGTGTGACA  444

seq1  ATATTCTTTTTTTTTTTTTTCCAAGACAAGGTTTCATTATGTAGCTCTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTTTTTTTTTTTTCCAAGACAAGGTTTCATTATGTAGCTCTGG  494

seq1  TTGTCCCAGAACCCAATATATAGGCCAGGCTGTCCTCAGACTCCGAGATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCAGAACCCAATATATAGGCCAGGCTGTCCTCAGACTCCGAGATC  544

seq1  TGCCTGTCTCTGCTTCCCAAGTGCTGGCATTACTCGGTTATGACAGTATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTCTCTGCTTCCCAAGTGCTGGCATTACTCGGTTATGACAGTATT  594

seq1  CTTAATCTTTGAGTCTTAAGAAGTCTCATCTACTGTTACCCATGGTAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCTTTGAGTCTTAAGAAGTCTCATCTACTGTTACCCATGGTAAAT  644

seq1  CCTAGGTAAGTCTTAGTCTGTTGGGCATGCTAGTAAAAAAAATAGACCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTAAGTCTTAGTCTGTTGGGCATGCTAGTAAAAAAAATAGACCAC  694

seq1  AGGCTAGGCAGTTTATAGAAAATAGAAGTTAAATTTTCTTAGTTCTAGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGGCAGTTTATAGAAAATAGAAGTTAAATTTTCTTAGTTCTAGGT  744

seq1  ACTGAAGTCTAAAATCAAAAGCTTGGGAAGATTTGGCAAGCAGTTGCTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGTCTAAAATCAAAAGCTTGGGAAGATTTGGCAAGCAGTTGCTTA  794

seq1  TTGATTCTTAGTTGGTACCTTCTTTCTGGGTTCCGGTATGGCAGAGGTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCTTAGTTGGTACCTTCTTTCTGGGTTCCGGTATGGCAGAGGTGG  844

seq1  GAAGAGATCTTTTCATTGGGTCTATTATTATTATTATTATTTGCAAAACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATCTTTTCATTGGGTCTATTATTATTATTATTATTTGCAAAACC  894

seq1  TTGTCTTGTCTTCTTCTTTCTGATGCTAGAATTCGAACCTAGTGTTTTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGTCTTCTTCTTTCTGATGCTAGAATTCGAACCTAGTGTTTTGC  944

seq1  ACATGTTAATGGAGTAATCTACCACTGTCTCTTGGCCCAAGACTTGGATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTAATGGAGTAATCTACCACTGTCTCTTGGCCCAAGACTTGGATT  994

seq1  TTATTTTATATTATTTTATTTTAAAAATAAGGGCACTAGTCTCTTTCCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATATTATTTTATTTTAAAAATAAGGGCACTAGTCTCTTTCCTA  1044

seq1  GGAATTC  1055
      |||||||
seq2  GGAATTC  1051

seq1: chr10_111158738_111158842
seq2: B6Ng01-241C07.g_69_173

seq1  ATAATGAGGTATAAGAAAGGCTGTCTTATAATTGCCTGTCACATGGACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGGTATAAGAAAGGCTGTCTTATAATTGCCTGTCACATGGACAA  50

seq1  TGGGTTATGCATTTGTGTGTATGAGAAAGAGATGGGGAGAGGGAGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATGCATTTGTGTGTATGAGAAAGAGATGGGGAGAGGGAGGGAGG  100

seq1  GGAGA  105
      |||||
seq2  GGAGA  105