BAC Information

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BAC

Clone NameB6Ng01-241H06
Chromosome10 (Build37)
Map Location 103,889,924 - 103,890,970
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241H06.bB6Ng01-241H06.g
ACCGA051363GA051364
length1,1641,040
definitionB6Ng01-241H06.b B6Ng01-241H06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccctatactggggaatagaaccttcacaggaccaggggattcta
ctcccattgatgaccaacaaggccatcctctgctacatatgcagctaggg
ccatgagtcccaccatgtgttttctctggttggtggtttaatcccaggag
ctctgggaatattggttaattcatattgatgttcctcctatgaggctgaa
aaccactccagcattttgggtactttctcttggtcctccattggggactc
tgtgctccatccaatggatggctgggaccatccacttttatatttatcag
gcactggcagagcctcacaggagacagctatatcaggctcctgtcagcaa
gcactggttgtcatccagaatagtgtctgggtttgatgattgtatatggg
gttgatccccagaaggggcagtctctggattgtcattcctttagtctctg
ctccacactttgtgtatttttgtcatgggtattttgttctcccttctaag
aaggatagaagtatccactctttgttcttccttcctgattttcatatagt
ttgtgaattgtatcttgggtattctgagcttctgagataatatgcactta
taagtgggtgtgtatcgtgtgtgttcttttgtgattgggttacctcactc
aggatgatatcctccagatgcatccatttgcctaagaattacataaattc
gttgtttttaatagactatgtagtattacattgtgtacatgtaccacgtt
ttctgtaaccatttcctctgttcagggatatctgggttcttttccagctt
ctggttattataaataaaagctgctatgaacaaagcagagcatgtatcct
tattacatgttggagcatcttctgggtatatgcacaggagtggtattgct
aagatcctccgggtagtactatgtccagttttctgaggaacttgccagac
ttgaattccagattggtaccgagcttggcaataccacccagcaatggagg
gagtgttcctcttatcttcatatcctaggccagcatcttggctgtcacct
gagttttttattcttagcccattctggactgggagtgaagggtgggaatc
tcaagggtttgcttgaatatgcattttctgtttgagactatcagatgtcg
taaacaactctttc

gaattcatgtggactataatagctcttcctttgttctcttctgatctgga
tccttgatattgacaaatgctctccattatcagagattcttatcttggtt
aattcagtcttggggtttgaaagatttggagtgttcattgtgtgctgaaa
ctttttcctggaggacatgaatttattgtttcaattagttaagggaggtt
tagaacatgacaaaacagtccaaccatattcatgctcaagaacgggcagt
tcttacattcaggctaacttaaatttctgacccatagactttagctagaa
agtgcataaacaacccactctattctcagagtaggagacaaatcttttga
cacagtcccttggcactgatgttaggttctatagcttctgaaggagcacg
tgtgcttctgttgctttgcctgtctctttcctctgaatctagatatgctc
acggatatcaacagccttctactccaggagaagggaggctctaaggatct
aagacacaaaggttttgtgcagtttggaaccacactcaatgcctggtgtt
ctcttatcatctcaccaaataaaggtgagatttagggatttctacatgct
gggatgatgggccatctaaggctggcatttgagaagaattttctatctgt
tataaagtgaataggttctgagtttctatctaagaatatctttcagccag
tatatagctttttcttttttcttctgaggacaatgctttatatacaggta
tttgttttcttactatgatgtaagaatgaaaggtgagtagctcactgctc
tggcaatttctgtcatcatcccttgctcttcttgagttttcatttgaagt
tgttctctgcccctgccagtgtatatggttgctcaggttgaatggggagc
actgtttactgcactaatagttagtcagatattattcatctctaccttct
actattattcaattgtatgagacttgaaggaaagatgtgctatacattgg
gtaactgtagggattaaattacatctaattaacttaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103889924_103890970
seq2: B6Ng01-241H06.g_61_1100 (reverse)

seq1  TTTTTAGTTTAATTTAAGATGTAAATTTAAATTCCCTACAGTTTACCAAT  50
      ||||||  ||||||  |||||| |||||||  |||||||||||  |||||
seq2  TTTTTAAGTTAATT--AGATGT-AATTTAA--TCCCTACAGTTACCCAAT  45

seq1  GTATAGCACATTCTTTTCCTTCAAGTCTCATACAATTGAAT-ATAGTAGA  99
      |||||||||||   ||||||||||||||||||||||||||| ||||||||
seq2  GTATAGCACAT--CTTTCCTTCAAGTCTCATACAATTGAATAATAGTAGA  93

seq1  AGGTAGAGATGAATAATTATCTGACTAACTATTAGTGCAGTAAACAGTGC  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGTAGAGATGAATAA-TATCTGACTAACTATTAGTGCAGTAAACAGTGC  142

seq1  TCCCCATTCAACCTGAGCAACCATATACACTGGCAGGGGCAGAGAACAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATTCAACCTGAGCAACCATATACACTGGCAGGGGCAGAGAACAAC  192

seq1  TTCAAATGAAAACTCAAGAAGAGCAAGGGATGATGACAGAAATTGCCAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGAAAACTCAAGAAGAGCAAGGGATGATGACAGAAATTGCCAGA  242

seq1  GCAGTGAGCTACTCACCTTTCATTCTTACATCATAGTAAGAAAACAAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGCTACTCACCTTTCATTCTTACATCATAGTAAGAAAACAAATA  292

seq1  CCTGTATATAAAGCATTGTCCTCAGAAGAAAAAAGAAAAAGCTATATACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATATAAAGCATTGTCCTCAGAAGAAAAAAGAAAAAGCTATATACT  342

seq1  GGCTGAAAGATATTCTTAGATAGAAACTCAGAACCTATTCACTTTATAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAGATATTCTTAGATAGAAACTCAGAACCTATTCACTTTATAAC  392

seq1  AGATAGAAAATTCTTCTCAAATGCCAGCCTTAGATGGCCCATCATCCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAATTCTTCTCAAATGCCAGCCTTAGATGGCCCATCATCCCAG  442

seq1  CATGTAGAAATCCCTAAATCTCACCTTTATTTGGTGAGATGATAAGAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGAAATCCCTAAATCTCACCTTTATTTGGTGAGATGATAAGAGAA  492

seq1  CACCAGGCATTGAGTGTGGTTCCAAACTGCACAAAACCTTTGTGTCTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCATTGAGTGTGGTTCCAAACTGCACAAAACCTTTGTGTCTTAG  542

seq1  ATCCTTAGAGCCTCCCTTCTCCTGGAGTAGAAGGCTGTTGATATCCGTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGAGCCTCCCTTCTCCTGGAGTAGAAGGCTGTTGATATCCGTGA  592

seq1  GCATATCTAGATTCAGAGGAAAGAGACAGGCAAAGCAACAGAAGCACACG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCTAGATTCAGAGGAAAGAGACAGGCAAAGCAACAGAAGCACACG  642

seq1  TGCTCCTTCAGAAGCTATAGAACCTAACATCAGTGCCAAGGGACTGTGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTCAGAAGCTATAGAACCTAACATCAGTGCCAAGGGACTGTGTC  692

seq1  AAAAGATTTGTCTCCTACTCTGAGAATAGAGTGGGTTGTTTATGCACTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTGTCTCCTACTCTGAGAATAGAGTGGGTTGTTTATGCACTTT  742

seq1  CTAGCTAAAGTCTATGGGTCAGAAATTTAAGTTAGCCTGAATGTAAGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAAAGTCTATGGGTCAGAAATTTAAGTTAGCCTGAATGTAAGAAC  792

seq1  TGCCCGTTCTTGAGCATGAATATGGTTGGACTGTTTTGTCATGTTCTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGTTCTTGAGCATGAATATGGTTGGACTGTTTTGTCATGTTCTAAA  842

seq1  CCTCCCTTAACTAATTGAAACAATAAATTCATGTCCTCCAGGAAAAAGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTAACTAATTGAAACAATAAATTCATGTCCTCCAGGAAAAAGTT  892

seq1  TCAGCACACAATGAACACTCCAAATCTTTCAAACCCCAAGACTGAATTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACACAATGAACACTCCAAATCTTTCAAACCCCAAGACTGAATTAA  942

seq1  CCAAGATAAGAATCTCTGATAATGGAGAGCATTTGTCAATATCAAGGATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATAAGAATCTCTGATAATGGAGAGCATTTGTCAATATCAAGGATC  992

seq1  CAGATCAGAAGAGAACAAAGGAAGAGCTATTATAGTCCACATGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAGAAGAGAACAAAGGAAGAGCTATTATAGTCCACATGAATTC  1040


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