BAC Information

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BAC

Clone NameB6Ng01-242B02
Chromosome10 (Build37)
Map Location 66,072,230 - 66,194,968
singlet/doubletdoublet
Overlap genenone
Upstream gene1700023F02Rik, 4930407I19Rik
Downstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242B02.bB6Ng01-242B02.g
ACCGA051818GA051819
length1,082947
definitionB6Ng01-242B02.b B6Ng01-242B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,193,882 - 66,194,968)(66,072,230 - 66,073,176)
sequence
gaattcaaatctggacttgcttttggataacctactccaagggaattttt
ttaaaatttcttttcttttttaatgaaacagtgatgtactagctccaagg
taacttggagctcatccttaatgcatataatccacttatcccttgatctt
ggacttctcagcctctggagctgtaacaaacaaatgtctggtcatatagt
gtttcctgtataacctgttttgttttgtttatttcgttttgctttgcttg
tagcagaagaagtggaccaggacaatgcttttctttcgtcaggtcaaatt
gaaatcagttgtgacttgctagacatttgggataatttagccatttccta
cccatctgtgatacaatgatacagggtaaacagattaaccacaataaaat
atcctgcttgtggtaatcctgagatacaatggaaaaaaaaaacattttgg
gccagatttgaagcaagctttattaaaaattaaatacagaccaagaggtg
gactttggtcaagaacaataagttaattttgggtattatacttggcaaag
cacactcatgcaagcacatacacaaaaatcaagaagagagcaaaaagaaa
aaaaaagtcttagtagatctagttggatgctaattttgagctcattcttt
aaaaagtcttctcagtcaacatttacttccttagtgtactgggatcagag
aagcacatttctcctgactcagctgaagaaggccctctggcattttcctc
acatccatgaagcaaattacaaaaaaaaaaaaaaaaaaaaaaaaaaaccc
aacaaaaacaaaaacaaaaaaattaaaaaattaaatcagattgtcttttt
tcaggtcacaaagggcctctagatcttgataagctttatcgagtccagta
ccatgatccacacgtggcctttaatcagtgtttcccaatgtttctgggag
taccatcaaagttggagcccccactatttttcatgattctccaagccaag
aagtgaaccagctggggtatcacagatgattgaaatggaaaatgtgtaca
tatacatgtatgtaaaggatcatatacacgtg

gaattcagaacatctggctctcccattaaagaacccttcagatgaagccc
tggtttctttctatagacaatgcagggattatggggtctgggtccaccaa
gatcctcacagagaaacaaaccaggaagagacagatactaggagatgctc
tgcaggacattggttcatacagctgtgaaacccagttcagcaagtctgaa
gccctcatgaagccagcaagtgatacacaccgatactctcggcataggct
tgtgtagagccacctccagaaatccttcttctgggagcttccatctgact
ggatgggcctcacttaccttatccaagaaagtccttgactcagaggcaac
ttatccttactgttacctacacccactgtcttagtcagggtttctattcc
tgtacaaacatcacgaccaagaagcaagttggggagaaaagggtttattc
agcttacacttccacacttctgatcattaccaaaggaaatcaggactgga
actcaagcaggtcaggaagcaggagctgatgcagaagccatggagggatg
tcacttctggcttgcttcctctgacttgttcagcttgctttcttatagaa
cacaggactactagtccagggatggcaccacctacaatcggccctccccg
cttgatcactaattgagaaaatgccccacagctggatttcatggaggcac
ttccccaactgaagctcctttctctgtaataactccagcctatgtcaagt
tgacacacaaaacatgccagtacacccacaaaatatctccacagcaacag
ctgggtaagtgagtgattggttggctagaaatgacagccttgcccagatg
gcacaaaatgaccatcatagacttcaggatggctcactttgcgactttgt
acctttaagaactagtagtatgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_66193882_66194968
seq2: B6Ng01-242B02.b_47_1128 (reverse)

seq1  CACGTGTATATGTATCCTTTACATACATGTATATGTACCACA-TTTCCAT  49
      |||||||||||| |||||||||||||||||||||||| |||| |||||||
seq2  CACGTGTATATG-ATCCTTTACATACATGTATATGTA-CACATTTTCCAT  48

seq1  TATCCATTCATCTGTTGATACCCAAGCTGGTTTCACTTCTTGGCTTTGGA  99
        | || ||||||| |||||||| |||||| ||||||||||||| |||||
seq2  --TTCAATCATCTG-TGATACCCCAGCTGG-TTCACTTCTTGGC-TTGGA  93

seq1  GAATCATGAAAAATAGT-GGGGCTCAAACTTTGATGGTACT-CCAGAAAC  147
      ||||||||||||||||| ||||||| ||||||||||||||| ||||||||
seq2  GAATCATGAAAAATAGTGGGGGCTCCAACTTTGATGGTACTCCCAGAAAC  143

seq1  ATTGGGAAACACTGATTAAA-GCCACGTGTGGATCATGGTACTGGACTCG  196
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTGGGAAACACTGATTAAAGGCCACGTGTGGATCATGGTACTGGACTCG  193

seq1  ATAAAGCTTATCAAGATCTAGAGG-CCTTTGTGACCTGAAAAAAGACAAT  245
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAAAGCTTATCAAGATCTAGAGGCCCTTTGTGACCTGAAAAAAGACAAT  243

seq1  CTGATTTTAATTTTTTAATTTTTTTGTTTTTGTTTTTGTTGGGTTTTTTT  295
      |||| ||||||||||||||||||||||||||||||||||||||  |||||
seq2  CTGA-TTTAATTTTTTAATTTTTTTGTTTTTGTTTTTGTTGGG--TTTTT  290

seq1  TTTTTTTTTTTTTTTTTTTTTTGTAATTTGCTTCATGGATGTGAGGAAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTGTAATTTGCTTCATGGATGTGAGGAAAA  340

seq1  TGCCAGAGGGCCTTCTTCAGCTGAGTCAGGAGAAATGTGCTTCTCTGATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGAGGGCCTTCTTCAGCTGAGTCAGGAGAAATGTGCTTCTCTGATC  390

seq1  CCAGTACACTAAGGAAGTAAATGTTGACTGAGAAGACTTTTTAAAGAATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACACTAAGGAAGTAAATGTTGACTGAGAAGACTTTTTAAAGAATG  440

seq1  AGCTCAAAATTAGCATCCAACTAGATCTACTAAGACTTTTTTTTTCTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAAATTAGCATCCAACTAGATCTACTAAGACTTTTTTTTTCTTTT  490

seq1  TGCTCTCTTCTTGATTTTTGTGTATGTGCTTGCATGAGTGTGCTTTGCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTTCTTGATTTTTGTGTATGTGCTTGCATGAGTGTGCTTTGCCA  540

seq1  AGTATAATACCCAAAATTAACTTATTGTTCTTGACCAAAGTCCACCTCTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAATACCCAAAATTAACTTATTGTTCTTGACCAAAGTCCACCTCTT  590

seq1  GGTCTGTATTTAATTTTTAATAAAGCTTGCTTCAAATCTGGCCCAAAATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTATTTAATTTTTAATAAAGCTTGCTTCAAATCTGGCCCAAAATG  640

seq1  TTTTTTTTTTCCATTGTATCTCAGGATTACCACAAGCAGGATATTTTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCCATTGTATCTCAGGATTACCACAAGCAGGATATTTTATT  690

seq1  GTGGTTAATCTGTTTACCCTGTATCATTGTATCACAGATGGGTAGGAAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAATCTGTTTACCCTGTATCATTGTATCACAGATGGGTAGGAAAT  740

seq1  GGCTAAATTATCCCAAATGTCTAGCAAGTCACAACTGATTTCAATTTGAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAATTATCCCAAATGTCTAGCAAGTCACAACTGATTTCAATTTGAC  790

seq1  CTGACGAAAGAAAAGCATTGTCCTGGTCCACTTCTTCTGCTACAAGCAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGAAAGAAAAGCATTGTCCTGGTCCACTTCTTCTGCTACAAGCAAA  840

seq1  GCAAAACGAAATAAACAAAACAAAACAGGTTATACAGGAAACACTATATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACGAAATAAACAAAACAAAACAGGTTATACAGGAAACACTATATG  890

seq1  ACCAGACATTTGTTTGTTACAGCTCCAGAGGCTGAGAAGTCCAAGATCAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACATTTGTTTGTTACAGCTCCAGAGGCTGAGAAGTCCAAGATCAA  940

seq1  GGGATAAGTGGATTATATGCATTAAGGATGAGCTCCAAGTTACCTTGGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAAGTGGATTATATGCATTAAGGATGAGCTCCAAGTTACCTTGGAG  990

seq1  CTAGTACATCACTGTTTCATTAAAAAAGAAAAGAAATTTTAAAAAAATTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTACATCACTGTTTCATTAAAAAAGAAAAGAAATTTTAAAAAAATTC  1040

seq1  CCTTGGAGTAGGTTATCCAAAAGCAAGTCCAGATTTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGTAGGTTATCCAAAAGCAAGTCCAGATTTGAATTC  1082


seq1: chr10_66072230_66073176
seq2: B6Ng01-242B02.g_69_1015

seq1  GAATTCAGAACATCTGGCTCTCCCATTAAAGAACCCTTCAGATGAAGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACATCTGGCTCTCCCATTAAAGAACCCTTCAGATGAAGCCC  50

seq1  TGGTTTCTTTCTATAGACAATGCAGGGATTATGGGGTCTGGGTCCACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTTTCTATAGACAATGCAGGGATTATGGGGTCTGGGTCCACCAA  100

seq1  GATCCTCACAGAGAAACAAACCAGGAAGAGACAGATACTAGGAGATGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCACAGAGAAACAAACCAGGAAGAGACAGATACTAGGAGATGCTC  150

seq1  TGCAGGACATTGGTTCATACAGCTGTGAAACCCAGTTCAGCAAGTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGACATTGGTTCATACAGCTGTGAAACCCAGTTCAGCAAGTCTGAA  200

seq1  GCCCTCATGAAGCCAGCAAGTGATACACACCGATACTCTCGGCATAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCATGAAGCCAGCAAGTGATACACACCGATACTCTCGGCATAGGCT  250

seq1  TGTGTAGAGCCACCTCCAGAAATCCTTCTTCTGGGAGCTTCCATCTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGAGCCACCTCCAGAAATCCTTCTTCTGGGAGCTTCCATCTGACT  300

seq1  GGATGGGCCTCACTTACCTTATCCAAGAAAGTCCTTGACTCAGAGGCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGCCTCACTTACCTTATCCAAGAAAGTCCTTGACTCAGAGGCAAC  350

seq1  TTATCCTTACTGTTACCTACACCCACTGTCTTAGTCAGGGTTTCTATTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTACTGTTACCTACACCCACTGTCTTAGTCAGGGTTTCTATTCC  400

seq1  TGTACAAACATCACGACCAAGAAGCAAGTTGGGGAGAAAAGGGTTTATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAACATCACGACCAAGAAGCAAGTTGGGGAGAAAAGGGTTTATTC  450

seq1  AGCTTACACTTCCACACTTCTGATCATTACCAAAGGAAATCAGGACTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTACACTTCCACACTTCTGATCATTACCAAAGGAAATCAGGACTGGA  500

seq1  ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAAGCCATGGAGGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAAGCCATGGAGGGATG  550

seq1  TCACTTCTGGCTTGCTTCCTCTGACTTGTTCAGCTTGCTTTCTTATAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTGGCTTGCTTCCTCTGACTTGTTCAGCTTGCTTTCTTATAGAA  600

seq1  CACAGGACTACTAGTCCAGGGATGGCACCACCTACAATCGGCCCTCCCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGACTACTAGTCCAGGGATGGCACCACCTACAATCGGCCCTCCCCG  650

seq1  CTTGATCACTAATTGAGAAAATGCCCCACAGCTGGATTTCATGGAGGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCACTAATTGAGAAAATGCCCCACAGCTGGATTTCATGGAGGCAC  700

seq1  TTCCCCAACTGAAGCTCCTTTCTCTGTAATAACTCCAGCCTATGTCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAACTGAAGCTCCTTTCTCTGTAATAACTCCAGCCTATGTCAAGT  750

seq1  TGACACACAAAACATGCCAGTACACCCACAAAATATCTCCACAGCAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACAAAACATGCCAGTACACCCACAAAATATCTCCACAGCAACAG  800

seq1  CTGGGTAAGTGAGTGATTGGTTGGCTAGAAATGACAGCCTTGCCCAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAAGTGAGTGATTGGTTGGCTAGAAATGACAGCCTTGCCCAGATG  850

seq1  GCACAAAATGACCATCATAGACTTCAGGATGGCTCACTTTGCGACTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAATGACCATCATAGACTTCAGGATGGCTCACTTTGCGACTTTGT  900

seq1  ACCTTTAAGAACTAGTAGTATGTGTGTGTGTGTGTGTGTGTGTGTGT  947
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAAGAACTAGTAGTATGTGTGTGTGTGTGTGTGTGTGTGTGT  947


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