BAC Information

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BAC

Clone NameB6Ng01-242D24
Chromosome10 (Build37)
Map Location 31,594,278 - 31,595,384
singlet/doubletsinglet
Overlap geneTcba1
Upstream geneLOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242D24.bB6Ng01-242D24.g
ACCGA051946GA051947
length1,1831,102
definitionB6Ng01-242D24.b B6Ng01-242D24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgctaagaagcacatgaaaaagtgttcaacatccttaat
catcagggaaatgcaaatccaaacaaccctgagattccacctcacaccag
tcagaatggctaagatcaaaaattcaggtgacagcagatgctggcaagga
tgtggagaaagaggaacactcctccattgttggtgggattgcaagcttgt
acaaccactctggaaatcagtctggcggttcctcagaaaattggacatat
tactactgcaagatcccacaatacctctcctgggcatatatccagaagat
gttccaaccggtaagaaggacacatgctccactatgttcatagcaccctt
atttataatagccagaagctggaaagaacccagatgcccctcaacagagg
aatggatacagaaaatgtggtacatttacacaatggagtactactcagct
attaaaaacaatgaatttatgaaattctttggcaaatggatgtatctgga
ggatatcaacctgagtgaggtaacccaatcacagaagaacacacatgata
tgcactcactgataagcagatattagtccagaaacttagaatacctaaga
tacaatttgcatacctcatgaaactcaagaaaaaggaagaccaacatgta
gatactttgttccttcttataatggggaacaaaatacccgtggaaggagt
tacagagacaaacttcagagctgagatggaaagaagaaccatccagaggc
tgccccacccggggatccatcccatatacaaccaccaaacccagatacta
ttgcatatgccagaaagagtttgctgacagtaccctctcttgtgatgcta
tgcctgtttctggcaaatacagaagtgggatgcaacacagggtccctaat
gaaggagctagagaaagtacccaaggagctaaagcgttctgcaaccatat
aggaggcacaacaatatgaactaaccattaacccccagagctgtgtcttt
agtgcatatgtagcagaggatggtctagtcagccatcatggagaggagtc
tggttttgtaagatctattgccccagtgcagggatgcagggccagagcgg
gattgctgttcaggagcaagtcggggaaacgttatgaactttgggatgca
ctggaatgcaaatgtgaagaaaaattctctcta
gaattcactatgatctgtgcccaccagtgagaaggctgagacctgctaac
cctaaagtccttgtgcctgcatacagttatcacatacaagtgaaaacatt
caaatccacatttttttatcaccacagtaaactactggtatatgattttt
tctttaaaaagccaggaatttcttcgctttggtctgagtgtggtgtatac
aactgaacatagataagaaaaaagatttagatttttttttttcagttcaa
gaaagaccatgaggagttaacggtgtagagaagctttcaagtagagacaa
aaggttcatccagaatctaccagttccaaacaatggaggaaagtacagct
tattgcttcagatctggagtactctgcttgtgtctggaggtgaagccacc
aaatagacgtatatccaaagatctgagacagtaaaggagtttcagagccc
tcatacacgaaggatcattactctacgcaggacaggggagagagctcagt
tagtaaacctcatactgcaggcatgaggtcctgatgttgttctccaaagc
ctgcatgcaacaaagccaggcatggtggcatgcatttgtaatgccatttc
tggatggagatgaaacaatccctgaggctcactagccaggcatatgtggc
agtgagtacaaggcaattaagagaagaactacagacaaagctgtcctcag
acctactctctctctctctctctcgctctctctctctcgctctcacacac
acacacacacacacacatgcacccacatatgcacacacagatagaaacaa
cacaagtgagcacatgcatgcgtgattcactctaagtcattgcatgagta
acaatataaataaaagaggcaaaattcaattctgaatgcaataacttcaa
aatcaaatccaggtttaattaaaaaaaaaaaaaacaaaacaagccaccct
attgatacatgaactcatctgctcacttttcagaaatttccattggagaa
atgccccttgatgtcagagcttatggcttatctagaaccttccagtactg
ggccaccgctacctgtcttatacccaactagaataagtgtacctttagac
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31594278_31595384
seq2: B6Ng01-242D24.g_67_1168 (reverse)

seq1  ATGTCTAAA-GTACACTTTATCTAGGTGGGTATTAGGAACAGGTAACCGT  49
      ||||||||| ||||||||  ||||| ||||||| ||  ||||||| | ||
seq2  ATGTCTAAAGGTACACTTATTCTAGTTGGGTATAAG--ACAGGTAGCGGT  48

seq1  GCCCAAGTTAACTTGAAAGTTTCTAGATAAGCCAATAAGCTCTGACAATC  99
      | || |||  || || ||| ||||||||||||| |||||||||||| |||
seq2  GGCCCAGT--AC-TGGAAGGTTCTAGATAAGCC-ATAAGCTCTGAC-ATC  93

seq1  AAGGGGCATTTCTCCAATGGAAATTTCTGAAAGGTGAGCAGATGAGTTCA  149
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGGGGCATTTCTCCAATGGAAATTTCTGAAAAGTGAGCAGATGAGTTCA  143

seq1  TGTATCAATAGGGT-GCTTGTTTTGTTTTTTTTTTTTTTAATTAAACCTG  198
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTATCAATAGGGTGGCTTGTTTTGTTTTTTTTTTTTTTAATTAAACCTG  193

seq1  GATTTGATTTTGAAGTTATTGCATTCAGAATTGAATTTTGCCTCTTTTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATTTTGAAGTTATTGCATTCAGAATTGAATTTTGCCTCTTTTAT  243

seq1  TTATATTGTTACTCATGCAATGACTTAGAGTGAATCACGCATGCATGTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTGTTACTCATGCAATGACTTAGAGTGAATCACGCATGCATGTGC  293

seq1  TCACTTGTGTTGTTTCTATCTGTGTGTGCATATGTGGGTGCATGTGTGTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTGTTGTTTCTATCTGTGTGTGCATATGTGGGTGCATGTGTGTG  343

seq1  TGTGTGTGTGTGTGTGAGAGCGAGAGAGAGAGAGCGAGAGAGAGAGAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGAGAGCGAGAGAGAGAGAGCGAGAGAGAGAGAGAG  393

seq1  AGAGTAGGTCTGAGGACAGCTTTGTCTGTAGTTCTTCTCTTAATTGCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGGTCTGAGGACAGCTTTGTCTGTAGTTCTTCTCTTAATTGCCTT  443

seq1  GTACTCACTGCCACATATGCCTGGCTAGTGAGCCTCAGGGATTGTTTCAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCACTGCCACATATGCCTGGCTAGTGAGCCTCAGGGATTGTTTCAT  493

seq1  CTCCATCCAGAAATGGCATTACAAATGCATGCCACCATGCCTGGCTTTGT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCAGAAATGGCATTACAAATGCATGCCACCATGCCTGGCTTTGT  543

seq1  TGCATGCAGGCTTTGGAGAACAACATCAGGACCTCATGCCTGCAGTATGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCAGGCTTTGGAGAACAACATCAGGACCTCATGCCTGCAGTATGA  593

seq1  GGTTTACTAACTGAGCTCTCTCCCCTGTCCTGCGTAGAGTAATGATCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACTAACTGAGCTCTCTCCCCTGTCCTGCGTAGAGTAATGATCCTT  643

seq1  CGTGTATGAGGGCTCTGAAACTCCTTTACTGTCTCAGATCTTTGGATATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATGAGGGCTCTGAAACTCCTTTACTGTCTCAGATCTTTGGATATA  693

seq1  CGTCTATTTGGTGGCTTCACCTCCAGACACAAGCAGAGTACTCCAGATCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTATTTGGTGGCTTCACCTCCAGACACAAGCAGAGTACTCCAGATCT  743

seq1  GAAGCAATAAGCTGTACTTTCCTCCATTGTTTGGAACTGGTAGATTCTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATAAGCTGTACTTTCCTCCATTGTTTGGAACTGGTAGATTCTGG  793

seq1  ATGAACCTTTTGTCTCTACTTGAAAGCTTCTCTACACCGTTAACTCCTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTTTTGTCTCTACTTGAAAGCTTCTCTACACCGTTAACTCCTCA  843

seq1  TGGTCTTTCTTGAACTGAAAAAAAAAAATCTAAATCTTTTTTCTTATCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTCTTGAACTGAAAAAAAAAAATCTAAATCTTTTTTCTTATCTA  893

seq1  TGTTCAGTTGTATACACCACACTCAGACCAAAGCGAAGAAATTCCTGGCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTTGTATACACCACACTCAGACCAAAGCGAAGAAATTCCTGGCT  943

seq1  TTTTAAAGAAAAAATCATATACCAGTAGTTTACTGTGGTGATAAAAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAAAAAATCATATACCAGTAGTTTACTGTGGTGATAAAAAAAT  993

seq1  GTGGATTTGAATGTTTTCACTTGTATGTGATAACTGTATGCAGGCACAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTTGAATGTTTTCACTTGTATGTGATAACTGTATGCAGGCACAAG  1043

seq1  GACTTTAGGGTTAGCAGGTCTCAGCCTTCTCACTGGTGGGCACAGATCAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAGGGTTAGCAGGTCTCAGCCTTCTCACTGGTGGGCACAGATCAT  1093

seq1  AGTGAATTC  1107
      |||||||||
seq2  AGTGAATTC  1102