BAC Information

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BAC

Clone NameB6Ng01-242F06
Chromosome10 (Build37)
Map Location 90,881,307 - 91,012,374
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242F06.bB6Ng01-242F06.g
ACCGA052004GA052005
length4341,111
definitionB6Ng01-242F06.b B6Ng01-242F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,011,934 - 91,012,374)(90,881,307 - 90,882,421)
sequence
ttgttggttgagttgctactgcaaggaacaagatggggaagggaaaggga
agggaggggagggaagagaatataggggagggaattttcccaggcccaca
gctcttataatgattacagtagtccaatatcacccatctttatatattaa
tctcttggccattattttcagtgcctggagatgcataaatatgctataaa
agaaactccaaaaaattcttcagggtaagcttattctgcagctggagaga
ccctaagacatggcttaccaccaccccgttgaccagcatgctcttggcca
ccccaaaaggtcattagtgtctccctcaatccctccacaatcctgtagct
tcaaaaactcctaatacctgtggtgattcatctgggcaggaaaggttttt
aagaacatattatctccacagacaaactgtcctt
gaattcactgtcttatgtttctctaaggatatttgagtttgctttttctt
tctttttttcatattcatttactctatctcctcaaccttcccccttctca
ctttgggttcaactcccttaggcatgttacagacatgttacagacatgtt
acagacatgttacagacatgttatagccatattacaggcatgttacagat
atattacagacatgatacagacatgttatagacatgttacagacatgtta
tagatgttacagacatgttacagacatattacagacatgttacaggcatg
ttacaggcacgttacaggcatgttacagatatattatagacatgttatag
acatgttacagacatattacaggcatgttatacactttctaccaatatat
tgtctttttggctgtctgttcctatttagttataaggtcctataaaaatt
tgtgtgacagctctgggtacctggtggttctgaccaactggtgtctccaa
caggcagatccttttctggttggcttcttaatgtctgtaaaaatgagtgc
ttgaatgtactgctttggagctgtgtatctcaaagtctgctttctgaaaa
tcattgtcagggcctggtggaatcctgcacagtagttaaaagtcagaatg
gctcattttaaagaagtgctctgtctctcgtaacatactgtgtcccttca
tctgtagagtgaacattcaccaggacctattctgtaggactgttattaga
atttaataaagtaatacagaatgcttaaagtgtgacacaacatccaacac
ataacctatttttaatcatcatcatcatcaattatttcatcagtaatttc
ccagcaggcctttagtcctccatcatttgtcccagtatggagttcctctg
gtttggtgtgtctactgaagaagttgccaaccttctgcagattgaaggat
gaacagtctccaggctgagcagaagtgggaagagcacctagggatttcct
agctcagtatcctgattttgtaaaccttctgagcttcatcatacctctta
ctcttcagaataaagtgggttcagagattcctatcttttctgaatttaga
ggcaagccaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91011934_91012374
seq2: B6Ng01-242F06.b_42_481 (reverse)

seq1  ATGGACAGTTTGTCTGTGGAGATGATCTGTTCTT-CTTTCCCTTCCTGCC  49
      | ||||||||||||||||||||| || |||||||     || ||||||||
seq2  AAGGACAGTTTGTCTGTGGAGATAATATGTTCTTAAAAACCTTTCCTGCC  50

seq1  CAGGTGAATCACCACAGGTATTAGGAGTCTTTGAAGCTACAGGATGTGTG  99
      ||| |||||||||||||||||||||||| |||||||||||||||| ||||
seq2  CAGATGAATCACCACAGGTATTAGGAGTTTTTGAAGCTACAGGAT-TGTG  99

seq1  GAGGGATTGAGTGAGACACTGCTGACCTTTTGGGGTGGCCAAGAGCATGC  149
      ||||||||||| ||||||||  ||||||||||||||||||||||||||||
seq2  GAGGGATTGAGGGAGACACTAATGACCTTTTGGGGTGGCCAAGAGCATGC  149

seq1  TGGTCAACGGGGTGGTGGTAAGCCATGTCTTTGGGTCTCTCCAGCTGCAG  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGTCAACGGGGTGGTGGTAAGCCATGTCTTAGGGTCTCTCCAGCTGCAG  199

seq1  AATAAGCTTTCCCTGAAGATTTTTTTGGAGTTTCTTTTATAGCATATTTA  249
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  AATAAGCTTACCCTGAAGAATTTTTTGGAGTTTCTTTTATAGCATATTTA  249

seq1  TGCATCTCCAGGCACTGAAAATAATGGCCAAGAGATTAATATATAAAGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCCAGGCACTGAAAATAATGGCCAAGAGATTAATATATAAAGAT  299

seq1  GGGTGTTATTGGACTACTGTAATCATTTTAAGAGCTGTGGGCCTGGGAAA  349
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGTGATATTGGACTACTGTAATCATTATAAGAGCTGTGGGCCTGGGAAA  349

seq1  ATTCCCTTTCCTCTCTTTCTCTTCCCTCCCCTCCCTTCCCTTTCCCTTCC  399
      |||||||  ||| |  ||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCCCCTAT-ATTCTCTTCCCTCCCCTCCCTTCCCTTTCCCTTCC  398

seq1  CCATCTTGTTCCTTGCAGTAGCAACTCAACCAACAAGAATTC  441
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGTTCCTTGCAGTAGCAACTCAACCAACAAGAATTC  440

seq1: chr10_90881307_90882421
seq2: B6Ng01-242F06.g_67_1177

seq1  GAATTCACTGTCTTATGTTTCTCTAAGGATATTTGAGTTTGCTTTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTCTTATGTTTCTCTAAGGATATTTGAGTTTGCTTTTTCTT  50

seq1  TCTTTTTTTCATATTCATTTACTCTATCTCCTCAACCTTCCCCCTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTCATATTCATTTACTCTATCTCCTCAACCTTCCCCCTTCTCA  100

seq1  CTTTGGGTTCAACTCCCTTAGGCATGTTACAGACATGTTACAGACATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGTTCAACTCCCTTAGGCATGTTACAGACATGTTACAGACATGTT  150

seq1  ACAGACATGTTACAGACATGTTATAGCCATATTACAGGCATGTTACAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATGTTACAGACATGTTATAGCCATATTACAGGCATGTTACAGAT  200

seq1  ATATTACAGACATGATACAGACATGTTATAGACATGTTACAGACATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACAGACATGATACAGACATGTTATAGACATGTTACAGACATGTTA  250

seq1  TAGATGTTACAGACATGTTACAGACATATTACAGACATGTTACAGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTACAGACATGTTACAGACATATTACAGACATGTTACAGGCATG  300

seq1  TTACAGGCACGTTACAGGCATGTTACAGATATATTATAGACATGTTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCACGTTACAGGCATGTTACAGATATATTATAGACATGTTATAG  350

seq1  ACATGTTACAGACATATTACAGGCATGTTATACACTTTCTACCAATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTACAGACATATTACAGGCATGTTATACACTTTCTACCAATATAT  400

seq1  TGTCTTTTTGGCTGTCTGTTCCTATTTAGTTATAAGGTCCTATAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTGGCTGTCTGTTCCTATTTAGTTATAAGGTCCTATAAAAATT  450

seq1  TGTGTGACAGCTCTGGGTACCTGGTGGTTCTGACCAACTGGTGTCTCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGACAGCTCTGGGTACCTGGTGGTTCTGACCAACTGGTGTCTCCAA  500

seq1  CAGGCAGATCCTTTTCTGGTTGGCTTCTTAATGTCTGTAAAAATGAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGATCCTTTTCTGGTTGGCTTCTTAATGTCTGTAAAAATGAGTGC  550

seq1  TTGAATGTACTGCTTTGGAGCTGTGTATCTCAAAGTCTGCTTTCTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGTACTGCTTTGGAGCTGTGTATCTCAAAGTCTGCTTTCTGAAAA  600

seq1  TCATTGTCAGGGCCTGGTGGAATCCTGCACAGTAGTTAAAAGTCAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTCAGGGCCTGGTGGAATCCTGCACAGTAGTTAAAAGTCAGAATG  650

seq1  GCTCATTTTAAAGAAGTGCTCTGTCTCTCGTAACATACTGTGTCCCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTAAAGAAGTGCTCTGTCTCTCGTAACATACTGTGTCCCTTCA  700

seq1  TCTGTAGAGTGAACATTCACCAGGACCTATTCTGTAGGACTGTTATTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGAGTGAACATTCACCAGGACCTATTCTGTAGGACTGTTATTAGA  750

seq1  ATTTAATAAAGTAATACAGAATGCTTAAAGTGTGACACAACATCCAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAAGTAATACAGAATGCTTAAAGTGTGACACAACATCCAACAC  800

seq1  ATAACCTATTTTTAATCATCATCATCATCAATTATTTCATCAGTAATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTATTTTTAATCATCATCATCATCAATTATTTCATCAGTAATTTC  850

seq1  CCAGCAGGGCCTTAGTCCTCCATCA-TTGTCCCAGTATGGAGTTCCTCTG  899
      |||||||| | |||||||||||||| ||||||||||||||||||||||||
seq2  CCAGCAGGCCTTTAGTCCTCCATCATTTGTCCCAGTATGGAGTTCCTCTG  900

seq1  GTTTGGTGTGTCTACTGAAGAAGTTGCCAACCTTCTGCAGATTGAAGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTGTGTCTACTGAAGAAGTTGCCAACCTTCTGCAGATTGAAGGAT  950

seq1  GAACAGTCTCCAGGCTGAGCAGAGTGGGGAAGAGCACCTAGGGATTTCCT  999
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  GAACAGTCTCCAGGCTGAGCAGAAGTGGGAAGAGCACCTAGGGATTTCCT  1000

seq1  AGCTCAGTATCCTGATTTTTGTAAACCTTCTGAGGCTTCATCCATACCTC  1049
      ||||||||||||||| ||||||||||||||||| ||||||| ||||||||
seq2  AGCTCAGTATCCTGA-TTTTGTAAACCTTCTGA-GCTTCAT-CATACCTC  1047

seq1  TTACTCCTTCAGAATAAAGTGGGTTCAGAGATTCCTTAGCCTTTCTGGAT  1099
      ||||| ||||||||||||||||||||||||||||| || | |||||| ||
seq2  TTACT-CTTCAGAATAAAGTGGGTTCAGAGATTCC-TATCTTTTCTGAAT  1095

seq1  TTAGAGGCAAGGCAAG  1115
      ||||||||||| ||||
seq2  TTAGAGGCAAGCCAAG  1111