BAC Information

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BAC

Clone NameB6Ng01-243D16
Chromosome10 (Build37)
Map Location 14,903,011 - 15,050,025
singlet/doubletdoublet
Overlap genenone
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243D16.bB6Ng01-243D16.g
ACCGA052669GA052670
length1,0321,108
definitionB6Ng01-243D16.b B6Ng01-243D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,048,998 - 15,050,025)(14,903,011 - 14,903,956)
sequence
gaattcttaccttatggggtgtggtctgctagcccattaaagtaaaagcc
aaaattacagaaagtgttcaatctataagactgaatgtctctagtcccaa
tctggtgttggagttccaaaggtcatgagtctagtttgtaattctgacta
aaatgtatctaatatcaacaacggactgcctcagcaacagaaatgaagga
gtcactgagagtaaagataatttgtgcccatctgattgagttttagttga
ttcaagacatagttgaggtaacaaccaagggtagccatcatactgttagt
aaaaccaataatctttcctcttgatataaaacccagtatatacgattgtc
ttcttaattttttgagtaaaatgaacaataatttacagggtgatcatttt
caagttggctgtaaaagactgttgccatctgctataaattaaaatggaaa
tttttactgttgctgtgaaggaaaatgtttggaaacttatatttacagta
tagaacacaacaagtatttaaaaagagaaacattttcataaatggctttg
atcttggggggagggcgcagccaatgtgtttttcatgcaacttttattaa
ttgccaataatgaatagccgtatggtcatattggcagtccatcagcagta
gctgcagtcgctagaattctctactattttgtcaagacaaacttctgctc
gttaagctggaaacaacccagatgtcccatgacagaaaatggataaatgt
ggttcatttgcataatggaatactactcagctattaaccagcaacgtttt
gcaggcaaatggatggaactagaaactaacattctgagagaggtaactca
gacccaaaaggacatgcatggtatgtactcattaataagtgaatattaac
aagagagagagagaaaagaaagaaagaaagaaagaaagaaagagagagag
agagagagagagagagagagagagagagagagagagagagaagatggaag
gaaggaaggaatgaaaggaatgaaaggaagga

gaattcatgcagttgaatccttctcaacagtctgttttacgggaaccttc
gttaccatgacccgcagttctggttccggaatgagggatcttccttgatg
gttaactcccgtcccgagttttcttgtattttctcgtcccggattttctc
gtcccgggttctcggcaccaactcttaaacgcgttctcacgaccggccag
gaagaacacaacaaaccagaatcttctgcggcaaaactttattgcttaca
tcttcaggagccaggagcgcaagccccaagccccaaaaacgaaaggcccc
ccgcttacatctttaggagccagagcgccagcgcgccagagcgccagagc
gcagagcaagagctctattgtttacatctttaggagcaagcgagcaagag
ccagagccagagagcaaaagcgcaagagcgcaagcaagagagagaatggc
ggaaaccccgtcccctttaaggagaattatcctttgtctaggacgtatca
ctccctgattggctgcagcccatggccgagttgttgccacggggaaggca
gagtacatggggtagagaaatacccttggcacatgcgcagattatttgtt
taccacttagaacagaggatgtcagtgccatcttgtgacggcgaatgtgg
gggcggctcccaacactttataaccaaggaacataagtatttaagggttt
tctattgatagttccattgcaagttgagtatgctacactaaaatccaaga
gagaagaatgttcgaaacacgagtgataaattctggcaaatagtactgga
aatgaagaaacaaaataaagatgaatgttttagatttagttgtaggaaga
ccttcgggtttttacagagatgatcaaatcaaattatttccaacaataaa
ggtaagtaaagccaaatgggcacaagaattcaactggaattcacatattt
tattgtcagtatcagattctagaatacagtggatcctgtaaaatgtgcta
gtctaaggaaaactcatgtgtagccttacagtatgaaaacaggtcctttt
tgatcacatacaaaaagctagcctattatcattttcacagaattcactta
agcagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15048998_15050025
seq2: B6Ng01-243D16.b_46_1077 (reverse)

seq1  TCCTTCC-TTCCTTCC-TTCCTTCCTTCCTTCCTTCCTTCTTCTCTCTCT  48
      ||||||| ||| |||| ||| |||||||||||||||| ||||||||||||
seq2  TCCTTCCTTTCATTCCTTTCATTCCTTCCTTCCTTCCATCTTCTCTCTCT  50

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCT  100

seq1  TTCTTTCTTTCTTTCTTTTCTCTCTCTCTCTTGTTAATATTCACTTATTA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTTCTCTCTCTCTCTTGTTAATATTCACTTATTA  150

seq1  ATGAGTACATACCATGCATGTCCTTTTGGGTCTGAGTTACCTCTCTCAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTACATACCATGCATGTCCTTTTGGGTCTGAGTTACCTCTCTCAGA  200

seq1  ATGTTAGTTTCTAGTTCCATCCATTTGCCTGCAAAAC-TTGCT-CTTAAT  246
      ||||||||||||||||||||||||||||||||||||| |||||  |||||
seq2  ATGTTAGTTTCTAGTTCCATCCATTTGCCTGCAAAACGTTGCTGGTTAAT  250

seq1  AGCTGAGTAGTATTCCATTATGCAAATGAACCACATTTATCCATTTTCTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTAGTATTCCATTATGCAAATGAACCACATTTATCCATTTTCTG  300

seq1  TCATGGGACATCTGGGTTGTTTCCAGCTTAACGAGCAGAAGTTTGTCTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGACATCTGGGTTGTTTCCAGCTTAACGAGCAGAAGTTTGTCTTG  350

seq1  ACAAAATAGTAGAGAATTCTAGCGACTGCAGCTACTGCTGATGGACTGCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAGTAGAGAATTCTAGCGACTGCAGCTACTGCTGATGGACTGCC  400

seq1  AATATGACCATACGGCTATTCATTATTGGCAATTAATAAAAGTTGCATGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGACCATACGGCTATTCATTATTGGCAATTAATAAAAGTTGCATGA  450

seq1  AAAACACATTGGCTGCGCCCTCCCCCCAAGATCAAAGCCATTTATGAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATTGGCTGCGCCCTCCCCCCAAGATCAAAGCCATTTATGAAAA  500

seq1  TGTTTCTCTTTTTAAATACTTGTTGTGTTCTATACTGTAAATATAAGTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTTTTAAATACTTGTTGTGTTCTATACTGTAAATATAAGTTT  550

seq1  CCAAACATTTTCCTTCACAGCAACAGTAAAAATTTCCATTTTAATTTATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATTTTCCTTCACAGCAACAGTAAAAATTTCCATTTTAATTTATA  600

seq1  GCAGATGGCAACAGTCTTTTACAGCCAACTTGAAAATGATCACCCTGTAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGCAACAGTCTTTTACAGCCAACTTGAAAATGATCACCCTGTAA  650

seq1  ATTATTGTTCATTTTACTCAAAAAATTAAGAAGACAATCGTATATACTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTTCATTTTACTCAAAAAATTAAGAAGACAATCGTATATACTGG  700

seq1  GTTTTATATCAAGAGGAAAGATTATTGGTTTTACTAACAGTATGATGGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATATCAAGAGGAAAGATTATTGGTTTTACTAACAGTATGATGGCT  750

seq1  ACCCTTGGTTGTTACCTCAACTATGTCTTGAATCAACTAAAACTCAATCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGGTTGTTACCTCAACTATGTCTTGAATCAACTAAAACTCAATCA  800

seq1  GATGGGCACAAATTATCTTTACTCTCAGTGACTCCTTCATTTCTGTTGCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCACAAATTATCTTTACTCTCAGTGACTCCTTCATTTCTGTTGCT  850

seq1  GAGGCAGTCCGTTGTTGATATTAGATACATTTTAGTCAGAATTACAAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTCCGTTGTTGATATTAGATACATTTTAGTCAGAATTACAAACT  900

seq1  AGACTCATGACCTTTGGAACTCCAACACCAGATTGGGACTAGAGACATTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATGACCTTTGGAACTCCAACACCAGATTGGGACTAGAGACATTC  950

seq1  AGTCTTATAGATTGAACACTTTCTGTAATTTTGGCTTTTACTTTAATGGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATAGATTGAACACTTTCTGTAATTTTGGCTTTTACTTTAATGGG  1000

seq1  CTAGCAGACCACACCCCATAAGGTAAGAATTC  1028
      ||||||||||||||||||||||||||||||||
seq2  CTAGCAGACCACACCCCATAAGGTAAGAATTC  1032


seq1: chr10_14903011_14903956
seq2: B6Ng01-243D16.g_236_1175

seq1  CAACTCTTAAACGCGTTCTCACGACCGGCCAGGAAGAACACAACAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTAAACGCGTTCTCACGACCGGCCAGGAAGAACACAACAAACCA  50

seq1  GAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCCAGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCCAGGAGC  100

seq1  GCAAGCCCCAAGCCCCAAAAACGAAAGGCCCCCCGCTTACATCTTTAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCCCAAGCCCCAAAAACGAAAGGCCCCCCGCTTACATCTTTAGGA  150

seq1  GCCAGAGCGCCAGCGCGCCAGAGCGCCAGAGCGCAGAGCAAGAGCTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGCGCCAGCGCGCCAGAGCGCCAGAGCGCAGAGCAAGAGCTCTAT  200

seq1  TGTTTACATCTTTAGGAGCAAGCGAGCAAGAGCCAGAGCCAGAGAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATCTTTAGGAGCAAGCGAGCAAGAGCCAGAGCCAGAGAGCAAA  250

seq1  AGCGCAAGAGCGCAAGCAAGAGAGAGAATGGCGGAAACCCCGTCCCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAAGAGCGCAAGCAAGAGAGAGAATGGCGGAAACCCCGTCCCCTTT  300

seq1  AAGGAGAATTATCCTTTGTCTAGGACGTATCACTCCCTGATTGGCTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAATTATCCTTTGTCTAGGACGTATCACTCCCTGATTGGCTGCAG  350

seq1  CCCATGGCCGAGTTGTTGCCACGGGGAAGGCAGAGTACATGGGGTAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGCCGAGTTGTTGCCACGGGGAAGGCAGAGTACATGGGGTAGAGA  400

seq1  AATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACAGAGG  450

seq1  ATGTCAGTGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGTGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACACTT  500

seq1  TATAACCAAGGAACATAAGTATTTAAGGGTTTTCTATTGATAGTTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCAAGGAACATAAGTATTTAAGGGTTTTCTATTGATAGTTCCATT  550

seq1  GCAAGTTGAGTATGCTACACTAAAATCCAAGAGAGAAGAATGTTCGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTGAGTATGCTACACTAAAATCCAAGAGAGAAGAATGTTCGAAAC  600

seq1  ACGAGTGATAAATTCTGGCAAATAGTACTGGAAATGAAGAAACAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTGATAAATTCTGGCAAATAGTACTGGAAATGAAGAAACAAAATAA  650

seq1  AGATGAATGTTTTAGATTTAGTTGTAGGAAGACCTTCGGGTTTTTACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATGTTTTAGATTTAGTTGTAGGAAGACCTTCGGGTTTTTACAGA  700

seq1  GATGATCAAATCAAATTATTTCCAACAATAAAGGTAAGTAAAGCCAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCAAATCAAATTATTTCCAACAATAAAGGTAAGTAAAGCCAAATG  750

seq1  GGCACAAGAATTCAACTGGAATTCACATA-TTTATTGTCAGTATCAGATT  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCACAAGAATTCAACTGGAATTCACATATTTTATTGTCAGTATCAGATT  800

seq1  CTAGAATACAGTGGATCCTGTAAAATTGTGCTAGTCTAAAGAAAACTCAT  849
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  CTAGAATACAGTGGATCCTGTAAAA-TGTGCTAGTCTAAGGAAAACTCAT  849

seq1  GTGTAAGCTTACAGTATGAAAACAAGGCCCTTTTTGAATCCACATACAAA  899
      |||||  |||||||||||||||| ||| |||||||||   ||||||||||
seq2  GTGTAGCCTTACAGTATGAAAAC-AGGTCCTTTTTGA--TCACATACAAA  896

seq1  AAGCTTAGCTATTTATCATTTTTCACAGGATTTACTTAAGCAAGTTT  946
      |||| ||||   |||||| ||||||||| ||| |||||||| |||||
seq2  AAGC-TAGCCTATTATCA-TTTTCACAGAATTCACTTAAGC-AGTTT  940


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