BAC Information

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BAC

Clone NameB6Ng01-244O13
Chromosome10 (Build37)
Map Location 69,813,720 - 70,004,385
singlet/doubletdoublet
Overlap gene1200015N20Rik, LOC665398
Upstream geneCdc2a, LOC100039696, EG382371, Ank3, LOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955
Downstream genePhyhipl, EG665429, Bicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244O13.bB6Ng01-244O13.g
ACCGA053930GA053931
length554632
definitionB6Ng01-244O13.b B6Ng01-244O13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,003,827 - 70,004,385)(69,813,720 - 69,814,351)
sequence
cttctcagcacaaaagggaactgtccccagaaaagagtaatcagtagatt
aaaaatggcaaaatatttttggttgtaaggctagcctttggagctctcag
agactggtccatgaaccaacgagtatacacaggctggacctaggcctccc
tgcacataggtagcagatgtgcagcctggtcttcatgtgggtccccaaca
actggagcgggggctatcccaaaagctgttgcctgtccatgggacatgtt
ctagctgggctgtcttgtctggcctcagtgggagaggatgcacctagcct
cactgagactcgatgtgccagggtcggggaatgcccagggtagcctaact
tctcagaggagaagggtagagggtagggagagaattgtaggaaggggtga
ccagaaagtggggcagtgagtgggatataaagtgaatgaatgaatgaatg
aatgaatgaatacataaataaattcggcaacaagccctttcactctgcca
tagatcacaatgagaaccctcccatctgaagctaacttaaaagcatgctc
caga
gaattcttcagagttctctctactcacacgtggtggtactgtgggaagag
cgttctcatttcacttggagaagctaaaattctagcttttgcacatgaag
gggcgggaattttgctactccacattccctggagctcctgcttttacaga
aatgagaattctataaaacaagaaatcctgttcaatgagaggtgactgcc
taagccctgtagatgagagcaggttctttatagtgcttcgtattgctgga
ggtccacgatggctatgcttgcttcgtgtttcattttccaaggtctctaa
gggttggatgtgaaaatgatggagtagaggccatgggcttcactgttctc
actagtgggcttgggagggtgggtgactaatcacactggggatccactcc
tgtacatggctgggcaagggaccctcactaacttatcccagaaacctcac
aaatcttcccaaccttaaattccagaggcgctgaccatctgtagggccct
gaagccttttggttcctggctttaaaatatccttgggtaaacattttcca
aggtaaggctctttatctattgaagcatgggaccctcctcctaaagctaa
gatcttcgagtacaataaaagatcggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_70003827_70004385
seq2: B6Ng01-244O13.b_46_605 (reverse)

seq1  TCTGGAGCATGCTTTTAAGTTAGCTTCAGAT-GGAGGATTCTCATTGTGA  49
      ||||||||||||||||||||||||||||||| ||||| ||||||||||||
seq2  TCTGGAGCATGCTTTTAAGTTAGCTTCAGATGGGAGGGTTCTCATTGTGA  50

seq1  TCTATGGCAGAGTGTAAGGGCTTGTTGCCGAATTTATTTATGTATTCATT  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTATGGCAGAGTGAAAGGGCTTGTTGCCGAATTTATTTATGTATTCATT  100

seq1  CATTCATTCATTCATTCATTCACTTTATATCCCACTCACTGCCCCACTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCATTCATTCATTCACTTTATATCCCACTCACTGCCCCACTTT  150

seq1  CTGGTCACCCCTTCCTACAATTCTCTCCCTACCCTCTACCCTTCTCCTCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCACCCCTTCCTACAATTCTCTCCCTACCCTCTACCCTTCTCCTCT  200

seq1  GAGAAGTTAGGCTACCCTGGGCATTCCCCGACCCTGGCACATCGAGTCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTAGGCTACCCTGGGCATTCCCCGACCCTGGCACATCGAGTCTC  250

seq1  AGTGAGGCTAGGTGCATCCTCTCCCACTGAGGCCAGACAAGACAGCCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGCTAGGTGCATCCTCTCCCACTGAGGCCAGACAAGACAGCCCAG  300

seq1  CTAGAACATGTCCCATGGACAGGCAACAGCTTTTGGGATAGCCCCCGCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACATGTCCCATGGACAGGCAACAGCTTTTGGGATAGCCCCCGCTC  350

seq1  CAGTTGTTGGGGACCCACATGAAGACCAGGCTGCACATCTGCTACCTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTGGGGACCCACATGAAGACCAGGCTGCACATCTGCTACCTATG  400

seq1  TGCAGGGAGGCCTAGGTCCAGCCTGTGTATACTCGTTGGTTCATGGACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGAGGCCTAGGTCCAGCCTGTGTATACTCGTTGGTTCATGGACCA  450

seq1  GTCTCTGAGAGCTCCAAAGGCTAGCCTTACAACCAAAAATATTTTGCCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGAGAGCTCCAAAGGCTAGCCTTACAACCAAAAATATTTTGCCAT  500

seq1  TTTTAATCTACTGATTACTCTTTTCTGGGGACAGTTCCCTTTTGTGCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCTACTGATTACTCTTTTCTGGGGACAGTTCCCTTTTGTGCTGA  550

seq1  GAAGGAATTC  559
      ||||||||||
seq2  GAAGGAATTC  560

seq1: chr10_69813720_69814351
seq2: B6Ng01-244O13.g_68_699

seq1  GAATTCTTCAGAGTTCTCTCTACTCACACGTGGTGGTACTGTGGGAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGTTCTCTCTACTCACACGTGGTGGTACTGTGGGAAGAG  50

seq1  CGTTCTCATTTCACTTGGAGAAGCTAAAATTCTAGCTTTTGCACATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCATTTCACTTGGAGAAGCTAAAATTCTAGCTTTTGCACATGAAG  100

seq1  GGGCGGGAATTTTGCTACTCCACATTCCCTGGAGCTCCTGCTTTTACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGAATTTTGCTACTCCACATTCCCTGGAGCTCCTGCTTTTACAGA  150

seq1  AATGAGAATTCTATAAAACAAGAAATCCTGTTCAATGAGAGGTGACTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAATTCTATAAAACAAGAAATCCTGTTCAATGAGAGGTGACTGCC  200

seq1  TAAGCCCTGTAGATGAGAGCAGGTTCTTTATAGTGCTTCGTATTGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCTGTAGATGAGAGCAGGTTCTTTATAGTGCTTCGTATTGCTGGA  250

seq1  GGTCCACGATGGCTATGCTTGCTTCGTGTTTCATTTTCCAAGGTCTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCACGATGGCTATGCTTGCTTCGTGTTTCATTTTCCAAGGTCTCTAA  300

seq1  GGGTTGGATGTGAAAATGATGGAGTAGAGGCCATGGGCTTCACTGTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGATGTGAAAATGATGGAGTAGAGGCCATGGGCTTCACTGTTCTC  350

seq1  ACTAGTGGGCTTGGGAGGGTGGGTGACTAATCACACTGGGGATCCACTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGGGCTTGGGAGGGTGGGTGACTAATCACACTGGGGATCCACTCC  400

seq1  TGTACATGGCTGGGCAAGGGACCCTCACTAACTTATCCCAGAAACCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGGCTGGGCAAGGGACCCTCACTAACTTATCCCAGAAACCTCAC  450

seq1  AAATCTTCCCAACCTTAAATTCCAGAGGCGCTGACCATCTGTAGGGCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTCCCAACCTTAAATTCCAGAGGCGCTGACCATCTGTAGGGCCCT  500

seq1  GAAGCCTTTTGGTTCCTGGCTTTAAAATATCCTTGGGTAAACATTTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTTTGGTTCCTGGCTTTAAAATATCCTTGGGTAAACATTTTCCA  550

seq1  AGGTAAGGCTCTTTATCTATTGAAGCATGGGACCCTCCTCCTAAAGCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGGCTCTTTATCTATTGAAGCATGGGACCCTCCTCCTAAAGCTAA  600

seq1  GATCTTCGAGTACAATAAAAGATCGGGGGGGA  632
      ||||||||||||||||||||||||||||||||
seq2  GATCTTCGAGTACAATAAAAGATCGGGGGGGA  632