BAC Information

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BAC

Clone NameB6Ng01-245F24
Chromosome10 (Build37)
Map Location 3,680,232 - 3,786,132
singlet/doubletdoublet
Overlap genenone
Upstream geneCnksr3, Oprm1, A130090K04Rik
Downstream geneLOC237252, LOC100041224, Rgs17, Mtrf1l, Fbxo5, LOC666395, Vip, Myct1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245F24.bB6Ng01-245F24.g
ACCGA054275GA054276
length632681
definitionB6Ng01-245F24.b B6Ng01-245F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,785,611 - 3,786,132)(3,680,232 - 3,680,896)
sequence
gaattctctgtgaaaataaataaagtttaaagggatgaagagatgactca
gtggttaagaatattgactgctcttccacagttcctaagttcaattccca
gcaaccacatggtggctcataaccatctgtaatgggatccaatgcccttc
tctaatgtatctgaagaatgcaacaatgtactcatataaaataaataagt
aaatctctaaaaaaataaaaatttagactctgaaaatttttggagtgatt
tccagggctcacatttctaaagtagcctttctgatttttaacatacaaaa
tgctccctgaacttcctcactataagtttgactcagctattaaaaacaat
gacttcatgaaacttacaggcaaatggaaagaagtagaaaatatcctgag
tgaggtaagacaatcacaatagaacgcacatgctatgtactcactgataa
gtgggtattaggaaaaaagcttggaattcccaacatacaactcgcagatc
atatgaagctcaagaagcaagaccaaagtgtggatgcttcagttctacat
agaagggggaacaaataatcatgggagatagatggagggaagggcctggg
agggagagagaaagggagggaaaaagggggca

gaattccagggccaggatgcaggagtgagtgggttggggagtagggccgg
gggagggtataggggcctttaaggataacatttgaagtgtaaatgaagaa
aatatccactaaaaatcccttaaaaagaaatgttaatgaacaaactaata
aaaattgttttaaaaaaatagcctagtatcattaggagtaattattttta
ttatattttattttatatgccagcaatatttggttttactttaggtctct
aggctatgtagtctctagtttttggttacccaagctgtgtcagatgtggg
ttccatctaatgaattaagtaaatcaaatcagacattcgtcagttacccc
atgatgtttgggtcacaattccctagcatcttttccaggcataactgagg
gtagatccaaggttttgtgctctggctgatatttactcttctcttgtggt
agcttataaggtacctttatatgtcattgacactagaacatagaagtgaa
gattctatgtaggcaccagcttgactgattcatgttcaatgagttgcatg
ggtgttttcttcaacgatggggccttgctaatggttattggagagcaacc
tgtcttggcaatagtctgggttgttttgggatttctgttggtccattttg
gacagcatctcatttgaatggaacacacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_3785611_3786132
seq2: B6Ng01-245F24.b_42_563 (reverse)

seq1  TCTTGCTTCTTGAGCTTCATATGATCTGCGAGTTGTATGTTGGGAATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTCTTGAGCTTCATATGATCTGCGAGTTGTATGTTGGGAATTCC  50

seq1  AAGCTTTTTTCCTAATACCCACTTATCAGTGAGTACATAGCATGTGCGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTTTCCTAATACCCACTTATCAGTGAGTACATAGCATGTGCGTT  100

seq1  CTATTGTGATTGTCTTACCTCACTCAGGATATTTTCTACTTCTTTCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTGATTGTCTTACCTCACTCAGGATATTTTCTACTTCTTTCCATT  150

seq1  TGCCTGTAAGTTTCATGAAGTCATTGTTTTTAATAGCTGAGTCAAACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAAGTTTCATGAAGTCATTGTTTTTAATAGCTGAGTCAAACTTA  200

seq1  TAGTGAGGAAGTTCAGGGAGCATTTTGTATGTTAAAAATCAGAAAGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGGAAGTTCAGGGAGCATTTTGTATGTTAAAAATCAGAAAGGCTA  250

seq1  CTTTAGAAATGTGAGCCCTGGAAATCACTCCAAAAATTTTCAGAGTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAAATGTGAGCCCTGGAAATCACTCCAAAAATTTTCAGAGTCTAA  300

seq1  ATTTTTATTTTTTTAGAGATTTACTTATTTATTTTATATGAGTACATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTTTTTTAGAGATTTACTTATTTATTTTATATGAGTACATTGT  350

seq1  TGCATTCTTCAGATACATTAGAGAAGGGCATTGGATCCCATTACAGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTTCAGATACATTAGAGAAGGGCATTGGATCCCATTACAGATGG  400

seq1  TTATGAGCCACCATGTGGTTGCTGGGAATTGAACTTAGGAACTGTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCCACCATGTGGTTGCTGGGAATTGAACTTAGGAACTGTGGAAG  450

seq1  AGCAGTCAATATTCTTAACCACTGAGTCATCTCTTCATCCCTTTAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCAATATTCTTAACCACTGAGTCATCTCTTCATCCCTTTAAACTT  500

seq1  TATTTATTTTCACAGAGAATTC  522
      ||||||||||||||||||||||
seq2  TATTTATTTTCACAGAGAATTC  522


seq1: chr10_3680232_3680896
seq2: B6Ng01-245F24.g_66_730

seq1  GAATTCCAGGGCCAGGATGCAGGAGTGAGTGGGTTGGGGAGTAGGGCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAGGATGCAGGAGTGAGTGGGTTGGGGAGTAGGGCCGG  50

seq1  GGGAGGGTATAGGGGCCTTTAGGGATAGCATTTGAAGTGTAAATGAAGAA  100
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  GGGAGGGTATAGGGGCCTTTAAGGATAACATTTGAAGTGTAAATGAAGAA  100

seq1  AATATCCACTAAAAATCCCTTAAAAAGAAATGTTAATGAAGAAACTAATA  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATATCCACTAAAAATCCCTTAAAAAGAAATGTTAATGAACAAACTAATA  150

seq1  AAAATTGTTTTAAAAAAATAGCCTAGTATCATTAGGAGTAATTATTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTTTAAAAAAATAGCCTAGTATCATTAGGAGTAATTATTTTTA  200

seq1  TTATATTTTATTTTATATGCCAGCAATATTTGGTTTTACTTTAGGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATTTTATATGCCAGCAATATTTGGTTTTACTTTAGGTCTCT  250

seq1  AGGCTATGTAGTCTCTAGTTTTTGGTTACCCAAGCTGTGTCAGATGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATGTAGTCTCTAGTTTTTGGTTACCCAAGCTGTGTCAGATGTGGG  300

seq1  TTCCATCTAATGAATTAAGTAAATCAAATCAGACATTCGTCAGTTACCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTAATGAATTAAGTAAATCAAATCAGACATTCGTCAGTTACCCC  350

seq1  ATGATGTTTGGGTCACAATTCCCTAGCATCTTTTCCAGGCATAACTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTTTGGGTCACAATTCCCTAGCATCTTTTCCAGGCATAACTGAGG  400

seq1  GTAGATCCAAGGTTTTGTGCTCTGGCTGATATTTACTCTTCTCTTGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCCAAGGTTTTGTGCTCTGGCTGATATTTACTCTTCTCTTGTGGT  450

seq1  AGCTTATAGGGTACCTTTATATGTCATTGACACTAGAACATAGAAGTGAA  500
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATAAGGTACCTTTATATGTCATTGACACTAGAACATAGAAGTGAA  500

seq1  GATTCTATGTAGGCACCAGCTTGACTGATTCATGTTCAATGAGTTGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATGTAGGCACCAGCTTGACTGATTCATGTTCAATGAGTTGCATG  550

seq1  GGTGTTTTCTTCAGCAATGGGGCCTTGCTAATGGTTTTTGGAGAGCAACC  600
      ||||||||||||| | |||||||||||||||||||| |||||||||||||
seq2  GGTGTTTTCTTCAACGATGGGGCCTTGCTAATGGTTATTGGAGAGCAACC  600

seq1  TGTCTTGGCAATAGCCTGGGTTGTTTTGGGATTTCTGTTGGTCCATTTTG  650
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGCAATAGTCTGGGTTGTTTTGGGATTTCTGTTGGTCCATTTTG  650

seq1  GACAGCAACTCATTT  665
      ||||||| |||||||
seq2  GACAGCATCTCATTT  665


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