BAC Information

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BAC

Clone NameB6Ng01-245G02
Chromosome10 (Build37)
Map Location 31,380,210 - 31,381,403
singlet/doubletsinglet
Overlap genenone
Upstream geneNcoa7, LOC382354, Hey2, LOC654431, EG432448, Hddc2, Tpd52l1, LOC100041294, Ibrdc1, LOC666055, LOC667752
Downstream geneLOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245G02.bB6Ng01-245G02.g
ACCGA054279GA054280
length1,2561,172
definitionB6Ng01-245G02.b B6Ng01-245G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ccagcctttatctgggggaaggagagacccgcggggaattctcacctgca
ttaatgaagccttggatccattaaaagacgaccacataactggggcatag
tcattcatgcttctaattctagtgcttaggaggtggaggcagggagatta
gatgttcatccttagctaccaatagagttcaaggccagtgtggaatacat
gagaaattctcttaaagtgtgtgtgcatgtatgtgtgtatacatgtttgt
atgtgtgtgtacatgtgtatctgtgtgtatgtgtatgtacatatgtatat
gtatgcaataagtatacatgtatgtgtgcatgtgtgtattgtgtacatgt
atgtatatgtgtatgcatgtgtatatgtacatgtatagacatgagcacat
ctgtacatatgtgtgtacatctgtattttagaaacaaacaaatgaaacca
agaggaactggtttggatacaaagcatcccaaagcataaggtatttagga
ataaatattttaaaagtgtgcaaaaaattcaaatttaaaattaaatttaa
actttaaaatattgtaaaagtcaaataatgctccttaaaaggtatatcat
ccaaaaaaaaaaaaaaaaaaaagccgggcgtggtggcgcacacctttgat
cccagcacttgggaggcagaggcagcggatttctgagttcgaggccagcc
tggtctacaaagtgagttccaggacagtcagggctacacagagaaaccct
gtctccaaaaaaaaaaaaaaaaaagtatatcatgttcatagattaagatt
ccatatggaagaagacacaaaatggaagagaaatactttataaactacaa
actacatgtctgttctatttccttggttctttccttctaggtttatttat
aatgttcaatctccatgttgcttgatttttgttttttttctacgtccatt
tcactttccttctcagcctatgcactggattttaaaattttgttttcttg
cattgttttccatgccatatttttaccatttgatttttaatatccttctt
ttgtagtggtgacctttttatttggcctttggagtattcttttattattt
gaatggtcatttcaaaggtattttccatttaatcggaaatgtgttcttct
atctaattgtcacaagttattacttggtattgtttcatggaagtctggaa
tcttcttgcttctcaatatggttcagtttattaggacacgtgaggagaaa
tattat
gaattctcacctaaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatccaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcgaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgagc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtaaggtgacccaatcataaa
ggaactctcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacacattaaactcaa
gagaacgaagaccaaagtgtggacactttgccccttcttagaataggaaa
caaaacactcatggaaggagttacagagacaaaatttggaagtgtgatga
aaggatggaccatctagcgattgccatatccagtgatccatcccatgatc
agcttccaaacgctgacaccattgcatacactagcaagatttcgctgaaa
ggacccagatatagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggccgccc
aatggaggagctagagaaagcacccaaggaactaagggaactgcaactct
atagtagacacatatgaactaaccagtacctgagctcttgttttctagct
gcatatgtatcaaaagatgcctaatagtcatcacttgaaaggaagccatt
gacctcttataatgccagtacaggaatgccgagccagattgggaagtgtc
ctgggtttagggggaagtctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31380210_31381403
seq2: B6Ng01-245G02.b_35_1256

seq1  GGAATTCTCACCTGCATTAATGAAGCCTTGGATTCAGT-CACCACGACCA  49
      ||||||||||||||||||||||||||||||||| || |  |  |||||||
seq2  GGAATTCTCACCTGCATTAATGAAGCCTTGGATCCATTAAAAGACGACCA  50

seq1  CATAACTGGGGCATAGTCATTCATGCTTCTAATTCTAGTGCTTAGGAGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGGGGCATAGTCATTCATGCTTCTAATTCTAGTGCTTAGGAGGT  100

seq1  GGAGGCAGGGAGATTAGATGTTCATCCTTAGCTACCAATAGAGTTCAAGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGGAGATTAGATGTTCATCCTTAGCTACCAATAGAGTTCAAGG  150

seq1  CCAGTGTGGAATACATGAGAAATTCTCTTAAAGTGTGTGTGCATGTATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTGGAATACATGAGAAATTCTCTTAAAGTGTGTGTGCATGTATGT  200

seq1  GTGTATACATGTTTGTATGTGTGTGTACATGTGTATCTGTGTGTATGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATACATGTTTGTATGTGTGTGTACATGTGTATCTGTGTGTATGTGT  250

seq1  ATGTACATATGTATATGTATGCAATAAGTATACATGTATGTGTGCATGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATATGTATATGTATGCAATAAGTATACATGTATGTGTGCATGTG  300

seq1  TGTATTGTGTACATGTATGTATATGTGTATGCATGTGTATATGTACATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGTGTACATGTATGTATATGTGTATGCATGTGTATATGTACATGT  350

seq1  ATAGACATGAGCACATCTGTACATATGTGTGTACATCTGTATTTTAGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACATGAGCACATCTGTACATATGTGTGTACATCTGTATTTTAGAAA  400

seq1  CAAACAAATGAAACCAAGAGGAACTGGTTTGGATACAAAGCATCCCAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATGAAACCAAGAGGAACTGGTTTGGATACAAAGCATCCCAAAG  450

seq1  CATAAGGTATTTAGGAATAAATATTTTAAAAGTGTGCAAAAAATTCAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGGTATTTAGGAATAAATATTTTAAAAGTGTGCAAAAAATTCAAAT  500

seq1  TTAAAATTAAATTTAAACTTTAAAATATTGTAAAAGTCAAATAATGCTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTAAATTTAAACTTTAAAATATTGTAAAAGTCAAATAATGCTCC  550

seq1  TTAAAAGGTATATCATCCAAAAAAAAAAAAAAAAAAAAGCCGGGCGTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGTATATCATCCAAAAAAAAAAAAAAAAAAAAGCCGGGCGTGGT  600

seq1  GGCGCACACCTTTGATCCCAGCACTTGGGAGGCAGAGGCAGCGGATTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCACACCTTTGATCCCAGCACTTGGGAGGCAGAGGCAGCGGATTTCT  650

seq1  GAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGTCAGGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGTCAGGGC  700

seq1  TACACAGAGAAACCCTGTCTCCAAAAAAAAAAAAAAAAAAAAAAGTATAT  749
      ||||||||||||||||||||||    ||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTGTCTCC----AAAAAAAAAAAAAAAAAAGTATAT  746

seq1  CATGTTCATAGATTAAGATTCCATATGGAAGAAGACACAAAATGGAAGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCATAGATTAAGATTCCATATGGAAGAAGACACAAAATGGAAGAG  796

seq1  AAATAC-TTATAAACTACAAACTACATGTCTGTTCTATTTCCTTGGTTC-  847
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  AAATACTTTATAAACTACAAACTACATGTCTGTTCTATTTCCTTGGTTCT  846

seq1  TTCCTTCTAGG-TTATTTATAATGTTCAATCTCCATGTTGCTTGATTTTT  896
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTAGGTTTATTTATAATGTTCAATCTCCATGTTGCTTGATTTTT  896

seq1  G-TTTTTTTCTACGTCCATTTCACTTTCCTTCTCAGCCTATGCACTGAAT  945
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTTTTTTTCTACGTCCATTTCACTTTCCTTCTCAGCCTATGCACTGGAT  946

seq1  TTTAAAATTTTG-TTTCTTGCATTG-TTTCCATGCAATATTTT--ACATT  991
      |||||||||||| |||||||||||| ||||||||| |||||||   ||||
seq2  TTTAAAATTTTGTTTTCTTGCATTGTTTTCCATGCCATATTTTTACCATT  996

seq1  TGATTTTT-ATAT-CTTC-TTTGTAGT-GTGAC--TTTTATTT-GCCTT-  1033
      |||||||| |||| |||| |||||||| |||||  |||||||| ||||| 
seq2  TGATTTTTAATATCCTTCTTTTGTAGTGGTGACCTTTTTATTTGGCCTTT  1046

seq1  -GAGTAT--CTTTATTATT--GATGGTCATTT-AAAAGTATTTCCCATTT  1077
       ||||||   |||||||||   |||||||||| ||| |||||| ||||||
seq2  GGAGTATTCTTTTATTATTTGAATGGTCATTTCAAAGGTATTTTCCATTT  1096

seq1  AATC-GAAATGTG-TCTCTTATCTAAATGTCAACACTTATTACTT-GTAT  1124
      |||| |||||||| |||  ||||||| |||||  | ||||||||| ||||
seq2  AATCGGAAATGTGTTCTTCTATCTAATTGTCACAAGTTATTACTTGGTAT  1146

seq1  TGTTTCAT-GAAGTCTGAGATCTTCTTGCTTCTTCATATGGTTTCATTTT  1173
      |||||||| ||||||||  ||||||||||||||  |||||| |||| |||
seq2  TGTTTCATGGAAGTCTGGAATCTTCTTGCTTCTCAATATGG-TTCAGTTT  1195

seq1  ATTAGGACA--TGAGG----ATATTAT  1194
      |||||||||  |||||    |||||||
seq2  ATTAGGACACGTGAGGAGAAATATTAT  1222