BAC Information

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BAC

Clone NameB6Ng01-246D08
Chromosome10 (Build37)
Map Location 80,648,886 - 80,648,956
singlet/doubletsinglet
Overlap geneDapk3
Upstream geneEfna2, Mum1, Ndufs7, Gamt, Dazap1, Rps15, Apc2, 2310011J03Rik, Pcsk4, Reep6, Adamtsl5, 6330514A18Rik, Rkhd1, Mbd3, Uqcr, Tcfe2a, Onecut3, Atp8b3, Rexo1, Klf16, D10Bwg1364e, Scamp4, Csnk1g2, Btbd2, Mknk2, Mobkl2a, 9030607L17Rik, Ap3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2
Downstream geneItgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246D08.bB6Ng01-246D08.g
ACCGA054887GA054888
length1,214856
definitionB6Ng01-246D08.b B6Ng01-246D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacctaatggcagagaagcacctgaaaaaatg
atcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacaag
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattagacatagtactactggaggatcccgcaatacctctcctgttc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctagaaagaacccagat
tcccctcaacagatgaatggatacagaaaatctggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtagcatcctgagggaagtaacccaatcacaaag
gaactcacacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaacgcatgaaattcaag
aagaatgaagaccaaagtgtggacactttaccctttcttataaatgggaa
caaaacacccatggaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatttagtgattgtcatatgcagggatccatcccataatc
agcttccaaatgcttacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctctctcttgtgagactatgctggggcctagcaaac
acagaagtgaatgatcacagtcagctattggatggatcacagggccccca
atggaggagctagagaaagtacccaaggagctaaagggatctgcaaccct
ataggtggaacaacattatgaactaaccagtactcgggagctcttgtctt
tagctgcatatgtatcaaagatgacttactgtcatcactgccaaagaaga
gtccattggacttgcaacctttatatgccccagtacaggaacgcccaggt
caaaagggaattgagtggctagcgcacattcgcccatcgagtcgtacgag
gatgcacgagtgat
gaattcaggggcagttcttaccaggacaattttaaaaggacaggatgaaa
agagaacaggatagacacaggtgaagacaggaaaaagagaatgagaagcc
agaagattaaaacagattactggtccatccatttgcctaggaatttcata
aattcatttttttagctgagtagtattccattgtgtaaatgaaccatcct
agtgaagtaacccaatcacaaaggaactcgcacaatatgtactcactgat
aagtggataatagcccagaaacttaggatacccaagatataagatacaac
ttgccaaacgcatgaaattcaagaagaacgaagactaaagtgtggacact
ttaccttttcttagaaatgggaacaaaacacccatagaaggagttacaga
gacaaaatttggagctgtgacgaaaggatggaccatctagtgactgccat
atgcagggatccatcccataatcagcttccaaatgctgacaccattgcat
acactagcaagatttcgctgaaaggacccagttatagctctctcttgtga
gactatgccgggcctagcaaacacagaagtgaatgatcacagtcagctat
tggatgggtcacacggcccctaatggaggagctagagaaattacccaagg
agctaaagggaactgcaaccctataggtagaacaacaatatgaactaacc
agtacccgggagctcttgtctttagctgcatatgtatcaaaagatggcct
agtcggccatcactgcaaagagaggcccattggacttgcaaactttatat
gccccagtacaggggaacgccagggccaaaaagggggagtgggtggggta
ggggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_80648886_80648956
seq2: B6Ng01-246D08.g_848_919 (reverse)

seq1  TCCCCTA-CCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACT  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACT  50

seq1  GGGGCATATAAAGTTTGCAAGT  71
      ||||||||||||||||||||||
seq2  GGGGCATATAAAGTTTGCAAGT  72