BAC Information

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BAC

Clone NameB6Ng01-246L13
Chromosome10 (Build37)
Map Location 121,072,706 - 121,226,218
singlet/doubletdoublet
Overlap geneD930020B18Rik, BC048403, Srgap1
Upstream geneLOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot
Downstream geneEG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246L13.bB6Ng01-246L13.g
ACCGA055255GA055256
length1,1461,142
definitionB6Ng01-246L13.b B6Ng01-246L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,225,086 - 121,226,218)(121,072,706 - 121,073,758)
sequence
gaattcagtggttacaagtgcccattggcatagcagtattaattaatttc
atactcgatgaaacactactagcactgtgatttttctcagaagaacagac
agcccagcccttgctcacagtgttccagccaaagggtgattcactaaatg
gtagccctagagaatgtaacaccatgcaaaaagtatgttatgttatgtta
tgtttctacgctgtcagcctaaatgacagccagggacattcttctaagac
tggctgtgtgtcctggggaatggcagaacattgcttggagatgtgtccct
ctagtaaactgggagcaaactcaaggatgtggagccgcagaaacatttcc
aaggtgaaatgaagagaaatgcactgtcatgaaagaataatcctccccta
ccatgattaataaatgacaaggctggcgtccatccaaggtcagacagaca
gctgctaggcagctgtccatgctgcatagatgtccttacagcatcttctg
tgtaaaagtgcagtggcctttgtcaaggttgcacatctggcaggtttatt
atgtataatttttcttctttttcagtcaatcaagcacacacacataagat
cccttcctttacagccttccacgttcatatataagcatggcaatgtacct
ccattttgatgctcatgttcttcataatacgagaaagaagacaaaataga
gttacctattgctggcccccgcccctcccccacaaagggggaggagccat
aataaagaataggaaacagatccatccgacctgaatgactaaggaagcat
gggaagttgtgtgagcattaacgatttttaagtctaaaggctgagacagc
accacaggggaggagagcaaggcctcagtctcttctactctgtcttactc
tttctattgctgtgataaaacaccataaggaaaggggctattttatgtca
tgggcttgtagtctagcatccaggggatgtcaaggggagaactcaaatga
gatgggatccaatgtagaggctatgggaggagtgctgctctctggcttac
ttctcatggcttgcctcaaccttgcttttcttattaccacccaggaccac
ccggcttaggtttggtataccacccacattggactggaccctcctt
gaattcagagacgaacacatttgcacacataggaatcccatagaaatgcc
aaaaaaaaaaaaaaaaaaaaaaaggatgccataatgtatatacaaaaaac
ctgtaaggttaaaaaactctctgactcaacattatgagacaaggaacttc
tgaagatgctgttgggtttgttttctgttggcatcctgttgggcatggac
ctaccattaagggtatttgttcccccagtgagactcccgtggagaaaact
ttgcaagtagttatttatggtggagataacttctaggttagagatggagg
cgtgtgtccacatctccttttagctctaggagcccatctggtgcagaccc
atgcaggccctaggcatgctgcatctgtctgtgagttcatatgcacatca
gtcctgctgtgtccagaaggccttgtttctgtggtgttcttcatcctctc
tggctcttacagtctttctgcctctgcttctgcggggttccctgagtcct
gagggaaggagggattcgatggaaaggttccaaggttgagagttccaagg
tcccttgctttgcatatatccagaaaaatgttgtttttaattggtagcat
ttgcatatttccttagattttgtagacttctgtgtgttatctgattgcta
actattatagatatttaaatgaacagtattcattagtactaaatggaata
attaagagcttcttaaagcagtcccacttttgtttattatttttaaaatg
ttatgtgtatacatgttttgcctgcatgtatgtaaggacaccattcatgt
acagtgcccacgcaggtctgaagagcacactggattcccctggagctgga
gttacagttgtgagttactgagtactcgtcatctcttcagtgtcaccttg
tgaagtttagaatttgactcacctaccaccagaatttcgaatgttccatg
tgccacgtctgttcttaatttaaatgtggagtaaatggagacctatcgaa
actaatagaaaaataaagcaaaataaagcagcttagagatgcttagaccc
ggcttttactcttgacaatgaaaataaaaacaaaaatgcttgtttcctgg
cagaatggaatgttagccttagaggaacagcctctggattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_121225086_121226218
seq2: B6Ng01-246L13.b_51_1196 (reverse)

seq1  AAGGAGGGCCCAGTCCATTGTGGGTGG--TACCAACCCT-AGGCGGGTGG  47
      |||||||| |||||||| |||||||||  |||||| ||| || |||||||
seq2  AAGGAGGGTCCAGTCCAATGTGGGTGGTATACCAAACCTAAGCCGGGTGG  50

seq1  TCCTGGGTGGT-ATAAG-AAAGC-AGGTTGA-GCAAGCCATGAGGAGTAA  93
      ||||||||||| ||||| ||||| ||||||| |||||||||||| |||||
seq2  TCCTGGGTGGTAATAAGAAAAGCAAGGTTGAGGCAAGCCATGAGAAGTAA  100

seq1  GCCAGAGAGCAGCACT-CTTCCATAGCCTCTACATTGGATCCCATCTCAT  142
      |||||||||||||||| || ||||||||||||||||||||||||||||||
seq2  GCCAGAGAGCAGCACTCCTCCCATAGCCTCTACATTGGATCCCATCTCAT  150

seq1  TTGAGTTCTCCCCCTGACAT-CCCTGGATGCTAGACTACAAG-CCATGAC  190
      ||||||||||||| |||||| ||||||||||||||||||||| |||||||
seq2  TTGAGTTCTCCCCTTGACATCCCCTGGATGCTAGACTACAAGCCCATGAC  200

seq1  ATAAAATAGCCCCTTTCCTTATGGTGTTTTATCACAGCAATAGAAAGAGT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAGCCCCTTTCCTTATGGTGTTTTATCACAGCAATAGAAAGAGT  250

seq1  AAGACAGAGTAGAAGAGACTGAGGCCTTGCTCTCCT-CCCTGTGGTGCTG  289
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGACAGAGTAGAAGAGACTGAGGCCTTGCTCTCCTCCCCTGTGGTGCTG  300

seq1  TCTCAG-CTTTAGACTTAAAAATCGTTAATGCTCACACAACTT-CCATGC  337
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTCAGCCTTTAGACTTAAAAATCGTTAATGCTCACACAACTTCCCATGC  350

seq1  TTCCTTAGTCATTCAGGTCGGATGGATCTGTTTCCTATTCTTTATTATGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAGTCATTCAGGTCGGATGGATCTGTTTCCTATTCTTTATTATGG  400

seq1  CTCCTCCCCCTTTGTGGGGGAGGGGCGGGGGCCAGCAATAGGTAACTCTA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCCTTTGTGGGGGAGGGGCGGGGGCCAGCAATAGGTAACTCTA  450

seq1  TTTTGTCTTCTTTCTCGTATTATGAAGAACATGAGCATCAAAATGGAGGT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTCTTTCTCGTATTATGAAGAACATGAGCATCAAAATGGAGGT  500

seq1  ACATTGCCATGCTTATATATGAACGTGGAAGGCTGTAAAGGAAGGGATCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCCATGCTTATATATGAACGTGGAAGGCTGTAAAGGAAGGGATCT  550

seq1  TATGTGTGTGTGCTTGATTGACTGAAAAAGAAGAAAAATTATACATAATA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTGTGCTTGATTGACTGAAAAAGAAGAAAAATTATACATAATA  600

seq1  AACCTGCCAGATGTGCAACCTTGACAAAGGCCACTGCACTTTTACACAGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCCAGATGTGCAACCTTGACAAAGGCCACTGCACTTTTACACAGA  650

seq1  AGATGCTGTAAGGACATCTATGCAGCATGGACAGCTGCCTAGCAGCTGTC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGTAAGGACATCTATGCAGCATGGACAGCTGCCTAGCAGCTGTC  700

seq1  TGTCTGACCTTGGATGGACGCCAGCCTTGTCATTTATTAATCATGGTAGG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGACCTTGGATGGACGCCAGCCTTGTCATTTATTAATCATGGTAGG  750

seq1  GGAGGATTATTCTTTCATGACAGTGCATTTCTCTTCATTTCACCTTGGAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATTATTCTTTCATGACAGTGCATTTCTCTTCATTTCACCTTGGAA  800

seq1  ATGTTTCTGCGGCTCCACATCCTTGAGTTTGCTCCCAGTTTACTAGAGGG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTGCGGCTCCACATCCTTGAGTTTGCTCCCAGTTTACTAGAGGG  850

seq1  ACACATCTCCAAGCAATGTTCTGCCATTCCCCAGGACACACAGCCAGTCT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTCCAAGCAATGTTCTGCCATTCCCCAGGACACACAGCCAGTCT  900

seq1  TAGAAGAATGTCCCTGGCTGTCATTTAGGCTGACAGCGTAGAAACATAAC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAATGTCCCTGGCTGTCATTTAGGCTGACAGCGTAGAAACATAAC  950

seq1  ATAACATAACATACTTTTTGCATGGTGTTACATTCTCTAGGGCTACCATT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAACATACTTTTTGCATGGTGTTACATTCTCTAGGGCTACCATT  1000

seq1  TAGTGAATCACCCTTTGGCTGGAACACTGTGAGCAAGGGCTGGGCTGTCT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAATCACCCTTTGGCTGGAACACTGTGAGCAAGGGCTGGGCTGTCT  1050

seq1  GTTCTTCTGAGAAAAATCACAGTGCTAGTAGTGTTTCATCGAGTATGAAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCTGAGAAAAATCACAGTGCTAGTAGTGTTTCATCGAGTATGAAA  1100

seq1  TTAATTAATACTGCTATGCCAATGGGCACTTGTAACCACTGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATACTGCTATGCCAATGGGCACTTGTAACCACTGAATTC  1146

seq1: chr10_121072706_121073758
seq2: B6Ng01-246L13.g_143_1211

seq1  GGATGCCATAATGTATATACAAAAAACCTGTAAGGTTAAAAAACTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCATAATGTATATACAAAAAACCTGTAAGGTTAAAAAACTCTCTG  50

seq1  ACTCAACATTATGAGACAAGGAACTTCTGAAGATGCTGTTGGGTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACATTATGAGACAAGGAACTTCTGAAGATGCTGTTGGGTTTGTTT  100

seq1  TCTGTTGGCATCCTGTTGGGCATGGACCTACCATTAAGGGTATTTGTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGCATCCTGTTGGGCATGGACCTACCATTAAGGGTATTTGTTCC  150

seq1  CCCAGTGAGACTCCCGTGGAGAAAACTTTGCAAGTAGTTATTTATGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGAGACTCCCGTGGAGAAAACTTTGCAAGTAGTTATTTATGGTGG  200

seq1  AGATAACTTCTAGGTTAGAGATGGAGGCGTGTGTCCACATCTCCTTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACTTCTAGGTTAGAGATGGAGGCGTGTGTCCACATCTCCTTTTAG  250

seq1  CTCTAGGAGCCCATCTGGTGCAGACCCATGCAGGCCCTAGGCATGCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGAGCCCATCTGGTGCAGACCCATGCAGGCCCTAGGCATGCTGCA  300

seq1  TCTGTCTGTGAGTTCATATGCACATCAGTCCTGCTGTGTCCAGAAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTGAGTTCATATGCACATCAGTCCTGCTGTGTCCAGAAGGCCT  350

seq1  TGTTTCTGTGGTGTTCTTCATCCTCTCTGGCTCTTACAGTCTTTCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGTGGTGTTCTTCATCCTCTCTGGCTCTTACAGTCTTTCTGCCT  400

seq1  CTGCTTCTGCGGGGTTCCCTGAGTCCTGAGGGAAGGAGGGATTCGATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGCGGGGTTCCCTGAGTCCTGAGGGAAGGAGGGATTCGATGGA  450

seq1  AAGGTTCCAAGGTTGAGAGTTCCAAGGTCCCTTGCTTTGCATATATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCCAAGGTTGAGAGTTCCAAGGTCCCTTGCTTTGCATATATCCAG  500

seq1  AAAAATGTTGTTTTTAATTGGTAGCATTTGCATATTTCCTTAGATTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTGTTTTTAATTGGTAGCATTTGCATATTTCCTTAGATTTTGT  550

seq1  AGACTTCTGTGTGTTATCTGATTGCTAACTATTATAGATATTTAAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTGTGTGTTATCTGATTGCTAACTATTATAGATATTTAAATGAA  600

seq1  CAGTATTCATTAGTACTAAATGGAATAATTAAGAGCTTCTTAAAGCAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTCATTAGTACTAAATGGAATAATTAAGAGCTTCTTAAAGCAGTC  650

seq1  CCACTTTTGTTTATTATTTTTAAAATGTTATGTGTATACATGTTTTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTGTTTATTATTTTTAAAATGTTATGTGTATACATGTTTTGCCT  700

seq1  GCATGTATGTAAGGACACCATTCATGTACAGTGCCCACGCAGGTCTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATGTAAGGACACCATTCATGTACAGTGCCCACGCAGGTCTGAAG  750

seq1  AGCACACTGGATTCCCCTGGAGCTGGAGTTACAGTTGTGAGTTACTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACTGGATTCCCCTGGAGCTGGAGTTACAGTTGTGAGTTACTGAGT  800

seq1  ACTCGTCATCTCTCCAGTGTCACCTTGTGAAGTTTAG-ATTTGACTCACC  849
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  ACTCGTCATCTCTTCAGTGTCACCTTGTGAAGTTTAGAATTTGACTCACC  850

seq1  TACCA-CAG-ATTTCGAATG-TCCATGTGCACCGTCTG-TCTTAATTTAA  895
      ||||| ||| |||||||||| |||||||||  |||||| |||||||||||
seq2  TACCACCAGAATTTCGAATGTTCCATGTGCCACGTCTGTTCTTAATTTAA  900

seq1  ATGT-GAGTAAAT-GAGACCTATCGAAAACTAATAAGAAAAATAAAGCAA  943
      |||| |||||||| ||||||||||| |||||||| |||||||||||||||
seq2  ATGTGGAGTAAATGGAGACCTATCG-AAACTAAT-AGAAAAATAAAGCAA  948

seq1  AATAAAGCAGCTTAGAGATGCCTAGACCC-GCTTTTACTTCTTGAC-ATG  991
      ||||||||||||||||||||| ||||||| |||||||| ||||||| |||
seq2  AATAAAGCAGCTTAGAGATGCTTAGACCCGGCTTTTAC-TCTTGACAATG  997

seq1  AAAATAAAAAC-AAAATGC-TGTT--CTGGCAG-ATG--ATG-TAG-CTT  1032
      ||||||||||| ||||||| ||||  ||||||| |||  ||| ||| |||
seq2  AAAATAAAAACAAAAATGCTTGTTTCCTGGCAGAATGGAATGTTAGCCTT  1047

seq1  AGAGGAACAGCCCCTGG-TTGT  1053
      |||||||||||| |||| ||||
seq2  AGAGGAACAGCCTCTGGATTGT  1069