BAC Information

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BAC

Clone NameB6Ng01-247E10
Chromosome10 (Build37)
Map Location 63,794,191 - 63,795,340
singlet/doubletsinglet
Overlap geneCtnna3
Upstream geneSirt1, Dnajc12, LOC665182, EG631906, Lrrtm3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247E10.bB6Ng01-247E10.g
ACCGA055653GA055654
length8801,165
definitionB6Ng01-247E10.b B6Ng01-247E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatactagcccagccacaaaaccctccaactataatatgacc
tgcctgcaaatgtgctggggcaatgataacacaaaacttgtgggagtggt
caaccaatttctgatttaatgtccagcccattctatgaaatggagcctat
gacactacctggatggtcagaaatgggagactagacattctagagaccta
gggcagaagcaaacacaactggagaaagaacagtaagattgaacaaagct
actcaataggatgatttttaatgttattacactatatttatagatcagtg
tcttatccagtcatccatcagagaggcttcccctggcagtagataagaga
acatacagaaaccctcagccagtcattatacatagaaagagagagtctaa
attgggtatctccattaggtctgagatgggggaaccctgtggaagatgga
cagaaaacactgtaggagtcagaggggatggagaacaccaggagaacatg
gccctataaatcaactaagcacagctcatatggactcacagagactcaaa
ctcacagagaacaaacactgggcttccatgaatctgtaccagattcgcta
aatgtatgttaaagctgttagcttggtgtatttgtgggactcctgtcagt
ggagacaggagtgttctgcatctttcgactgctcttgagactcttttcat
tctattgagtaaccttgtccaatcttgatatgagattgccttgtctcatc
atatcttgttttgtcctgtttggttatcatcaactgaaggattgctactt
tctggagatgaaatggagagggaatagatctcagagcgaggggaggtgtt
taggggggacttgggggggaagtggaaagt

gaattcttaagctgcagtctaatccttcaattcagatgggctcatatcaa
tattggaagaaatttccagtttcattttcttgtgtctttatatcttggac
cactgacaagattgtctcttccctggcacagtcttaagcgtgactgactt
tatgagatgcacaggtcaagctacgcttattcctgtgtgggcatggaggg
tactaaagagtgttataaatgctacacgttgtactaatgactgatatata
ttattattatatatccatatacacatatatacatacacatatacctatat
gtatcatatacatatacatgtacatatacacatacacatacatatgctta
tgcacaccttttcattttatgtagcctcatttattcctctcatgccccat
gggaaatggaaatttctatttccaacttagagccagagagctaaagtgca
attttcagtaaagaaaaattctgagagtccatatgtgtgtatgcatttgt
tcttcttttgtagaagaatgcatgctaggggcagctttgcatagcaattg
atttaatgtgctcccctggaaaggcaaagaaatcccttgaaatatctctg
gcattttttcctatgacactgaagtgtcagaccattttgggctcataaag
tagtcaattcctttaggtgccatagacctttcagcggttgtatatttttt
agttagtaaatagccaaacgtgttcctcctatatttcagttcaagatgaa
atcaccttaatgaagagatctcacatggaaccgatctgagcacatcaata
atgaatgaattctaaaagggctttaaaataactgctgagaggcacgggtg
gaaataacagcacttcagagtggcattttccacttgttggcaatacccat
cagagcatctctccccatggctctcagctctctcagcattctgtccaact
tttggaattcatgcatgtgtgatgcactgctaatttttttttggcaaggg
agaattaatgacccactgagaccctggtggtgccagcttcttgatgccct
tataccataggagtgtttttaaattggctaaaacaatttcaataggaatg
gatgtataaattccattgaatggcatacataatattttattgcatttcac
cctgtgcctataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_63794191_63795340
seq2: B6Ng01-247E10.g_67_1231

seq1  GAATTCTTAAGCTGCAGTCTAATCCTTCAATTCAGATGGGCTCATATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGCTGCAGTCTAATCCTTCAATTCAGATGGGCTCATATCAA  50

seq1  TATTGGAAGAAATTTCCAGTTTCATTTTCTTGTGTCTTTATATCTTGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAAGAAATTTCCAGTTTCATTTTCTTGTGTCTTTATATCTTGGAC  100

seq1  CACTGACAAGATTGTCTCTTCCCTGGCACAGTCTTAAGCGTGACTGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACAAGATTGTCTCTTCCCTGGCACAGTCTTAAGCGTGACTGACTT  150

seq1  TATGAGATGCACAGGTCAAGCTACGCTTATTCCTGTGTGGGCATGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATGCACAGGTCAAGCTACGCTTATTCCTGTGTGGGCATGGAGGG  200

seq1  TACTAAAGAGTGTTATAAATGCTACACGTTGTACTAATGACTGATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGAGTGTTATAAATGCTACACGTTGTACTAATGACTGATATATA  250

seq1  TTATTATTATATATCCATATACACATATATACATACACATATACCTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTATATATCCATATACACATATATACATACACATATACCTATAT  300

seq1  GTATCATATACATATACATGTACATATACACATACACATACATATGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATATACATATACATGTACATATACACATACACATACATATGCTTA  350

seq1  TGCACACCTTTTCATTTTATGTAGCCTCATTTATTCCTCTCATGCCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCTTTTCATTTTATGTAGCCTCATTTATTCCTCTCATGCCCCAT  400

seq1  GGGAAATGGAAATTTCTATTTCCAACTTAGAGCCAGAGAGCTAAAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGGAAATTTCTATTTCCAACTTAGAGCCAGAGAGCTAAAGTGCA  450

seq1  ATTTTCAGTAAAGAAAAATTCTGAGAGTCCATATGTGTGTATGCATTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTAAAGAAAAATTCTGAGAGTCCATATGTGTGTATGCATTTGT  500

seq1  TCTTCTTTTGTAGAAGAATGCATGCTAGGGGCAGCTTTGCATAGCAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTTGTAGAAGAATGCATGCTAGGGGCAGCTTTGCATAGCAATTG  550

seq1  ATTTAATGTGCTCCCCTGGAAAGGCAAAGAAATCCCTTGAAATATCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTGCTCCCCTGGAAAGGCAAAGAAATCCCTTGAAATATCTCTG  600

seq1  GCATTTTTTCCTATGACACTGAAGTGTCAGACCATTTTGGGCTCATAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTTCCTATGACACTGAAGTGTCAGACCATTTTGGGCTCATAAAG  650

seq1  TAGTCAATTCCTTTAGGTGCCATAGACCTTTCAGCGGTTGTATATTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAATTCCTTTAGGTGCCATAGACCTTTCAGCGGTTGTATATTTTTT  700

seq1  AGTTAGTAAATAGCCAAACGTGTTCCTCCTATATTTCAGTTCAAGATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTAAATAGCCAAACGTGTTCCTCCTATATTTCAGTTCAAGATGAA  750

seq1  ATCACCTTAATGAAGAGATCTCACATGGAACCGATCTGAGCACATCAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTTAATGAAGAGATCTCACATGGAACCGATCTGAGCACATCAATA  800

seq1  ATGAATGAATTCTAAAAGGGCTTTAAAATAACTGCTGAGAGGCACGGGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAATTCTAAAAGGGCTTTAAAATAACTGCTGAGAGGCACGGGTG  850

seq1  GAAATAACAGCAC-TCAGAGTGGCATTTTCCACTTGTTGGCAATACCCAT  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAATAACAGCACTTCAGAGTGGCATTTTCCACTTGTTGGCAATACCCAT  900

seq1  CAGAGCATCTCTCCCCATGGCTCTCAGCTCTCTCAGCATTCTGTCCA--C  947
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CAGAGCATCTCTCCCCATGGCTCTCAGCTCTCTCAGCATTCTGTCCAACT  950

seq1  TTTGGAATTCATGCATGTGTGATGCACTGCTAA---TTTTTTGGC-AGGG  993
      |||||||||||||||||||||||||||||||||   ||||||||| ||||
seq2  TTTGGAATTCATGCATGTGTGATGCACTGCTAATTTTTTTTTGGCAAGGG  1000

seq1  AGAATTTATGA-CCACTGAGACCCTGGT-GTGCCAGCTTCTGAATG-CCT  1040
      |||||| |||| |||||||||||||||| ||||||||||||  ||| |||
seq2  AGAATTAATGACCCACTGAGACCCTGGTGGTGCCAGCTTCTTGATGCCCT  1050

seq1  TATACCATAGGAGTGTTTTTAAATTGGCAAAAACAATTTCAATAGGAAT-  1089
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  TATACCATAGGAGTGTTTTTAAATTGGCTAAAACAATTTCAATAGGAATG  1100

seq1  GATGT-TAAAATCACATGAATGGCCATACCTAATATTTTATTGCAATTCA  1138
      ||||| |||| ||   ||||||| ||||| ||||||||||||||| ||||
seq2  GATGTATAAATTCCATTGAATGG-CATACATAATATTTTATTGCATTTCA  1149

seq1  CCCTG----CATAAAA  1150
      |||||     ||||||
seq2  CCCTGTGCCTATAAAA  1165


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