BAC Information

Click to search

BAC

Clone NameB6Ng01-247N02
Chromosome12 (Build37)10 (Build37)
Map Location 15,130,974 - 15,131,03914,683,496 - 14,684,145
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247N02.bB6Ng01-247N02.g
ACCGA056055GA056056
length201651
definitionB6Ng01-247N02.b B6Ng01-247N02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(15,130,974 - 15,131,039)(14,683,496 - 14,684,145)
sequence
tctgtttagttagttctctctctctctctctctctccctccttctctcct
tccctccctctctgtctctctctctccccctccctctttctgtctctctg
tctctttctctctctctctctctctctctctccctccctccctcccttcc
tccctccctccctttctctctccctccctctctctttctctttttgattg
a
gaattctcagctacttctcctacactatttctgcctccaagctgccatga
tttgggtcatgacaatactggatgaaaactctgaactgccccatctggga
atccatcccatctgcagacaccaaaccccaacactattgctgatgccaag
aattgcttgctgacaggagcctggtattgctaatgtcagccccaattata
tgtttccccatataagagttgtcatggtcatggtgtcccttcacagcaat
agaaactttgactaagacactgtggttttctaatagaatatattgtcaaa
tacaagaaagtagtgatcagcatgattagtctcaagtgttctgctcagat
tcttgacaatgaggttttgaggtgaagattagatttcaaaatatttaatt
tattaattttcttttttattttttttgtcaaagtaccgatattgaaaccc
agggctctctgcactctaggaaagcaccttacaactaaattaaattattg
gaaggagggttatgtttgtagtatataatctttaccattttgaggtatgt
tctaactatccctcacacctagaacttttatcatgatgacattttaaagt
ttacaaatgctgtttaagcatcaactgaaataattatggacttttaaaaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15130974_15131039
seq2: B6Ng01-247N02.b_65_188

seq1  GTTCTCTCTCTCTCTCTCTCTCTCTCTC--TCTCTC--TCTCTCTCTCTC  46
      |||||||||||||||||||||||| |||  ||||||  || ||| |||||
seq2  GTTCTCTCTCTCTCTCTCTCTCTCCCTCCTTCTCTCCTTCCCTCCCTCTC  50

seq1  TCTCTCTCTCTCTCTCCCTC------------------------------  66
      | |||||||||||| |||||                              
seq2  TGTCTCTCTCTCTCCCCCTCCCTCTTTCTGTCTCTCTGTCTCTTTCTCTC  100

seq1  ------------------------  66
                              
seq2  TCTCTCTCTCTCTCTCTCTCCCTC  124

seq1: chr10_14683496_14684145
seq2: B6Ng01-247N02.g_66_715 (reverse)

seq1  TTTTTAAAAGTCCATAATTATTTCAGTTGATGCTTAAACAGCATTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAGTCCATAATTATTTCAGTTGATGCTTAAACAGCATTTGTAA  50

seq1  ACTTTAAAATGTCATCATGATAAAAGTTCTAGGTGTGAGGGATAGTTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAATGTCATCATGATAAAAGTTCTAGGTGTGAGGGATAGTTAGA  100

seq1  ACATACCTCAAAATGGTAAAGATTATATACTACAAACATAACCCTCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTCAAAATGGTAAAGATTATATACTACAAACATAACCCTCCTTC  150

seq1  CAATAATTTAATTTAGTTGTAAGGTGCTTTCCTAGAGTGCAGAGAGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATTTAATTTAGTTGTAAGGTGCTTTCCTAGAGTGCAGAGAGCCCT  200

seq1  GGGTTTCAATATCGGTACTTTGACAAAAAAAATAAAAAAGAAAATTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCAATATCGGTACTTTGACAAAAAAAATAAAAAAGAAAATTAATA  250

seq1  AATTAAATATTTTGAAATCTAATCTTCACCTCAAAACCTCATTGTCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATATTTTGAAATCTAATCTTCACCTCAAAACCTCATTGTCAAGA  300

seq1  ATCTGAGCAGAACACTTGAGACTAATCATGCTGATCACTACTTTCTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCAGAACACTTGAGACTAATCATGCTGATCACTACTTTCTTGTA  350

seq1  TTTGACAATATATTCTATTAGAAAACCACAGTGTCTTAGTCAAAGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACAATATATTCTATTAGAAAACCACAGTGTCTTAGTCAAAGTTTCT  400

seq1  ATTGCTGTGAAGGGACACCATGACCATGACAACTCTTATATGGGGAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTGAAGGGACACCATGACCATGACAACTCTTATATGGGGAAACA  450

seq1  TATAATTGGGGCTGACATTAGCAATACCAGGCTCCTGTCAGCAAGCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGGGGCTGACATTAGCAATACCAGGCTCCTGTCAGCAAGCAATT  500

seq1  CTTGGCATCAGCAATAGTGTTGGGGTTTGGTGTCTGCAGATGGGATGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCATCAGCAATAGTGTTGGGGTTTGGTGTCTGCAGATGGGATGGAT  550

seq1  TCCCAGATGGGGCAGTTCAGAGTTTTCATCCAGTATTGTCATGACCCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATGGGGCAGTTCAGAGTTTTCATCCAGTATTGTCATGACCCAAA  600

seq1  TCATGGCAGCTTGGAGGCAGAAATAGTGTAGGAGAAGTAGCTGAGAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAGCTTGGAGGCAGAAATAGTGTAGGAGAAGTAGCTGAGAATTC  650