BAC Information

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BAC

Clone NameB6Ng01-248F08
Chromosome10 (Build37)
Map Location 101,865,999 - 101,867,156
singlet/doubletsinglet
Overlap genenone
Upstream geneMgat4c
Downstream geneLOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248F08.bB6Ng01-248F08.g
ACCGA056438GA056439
length1,143677
definitionB6Ng01-248F08.b B6Ng01-248F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttctggtttgcatacttaaaatgtatgtattggttgattta
tatataatatttcctgagtcagaatttatttaaaagctatctgatcatgg
tgacattttctagtagatataactatatttaagtaacacaaaaaggttaa
gtaatttaaataactagttcattcatgtgaatctttttttttccagaaaa
actaaactccaaactattctgtctttttcaactattgaaaatgtaaacat
aaaactattcatggttatgggaacaaacactgaagactccaaaagttgca
aattttaatttattatatgacagattttaaggtcaccagttccaaacctg
ctaatgtgttactttgacaacacatagaactattttgttcactaatgaat
actttaatttgagctactaatttaaagagttggaaaacatcaatagactc
taacgttgcatttatcaccctaacttacattacattacattacttacatc
acctaacttacattacatttccttaacagatacttaatagtctttcaatg
ggttgctttaattatgtaattctaatgtggttttagttatttaaacattt
aaaaaatgcttcttgtagcttattgttcaaaaaaaaaaaaaccaaacaaa
catactattgagtcatccctaatgatgactcagtccactgaaaataaata
aaatacacaaattacagataaaatttattaaaagtgtatattatagactg
catatttttgtggagctatgtccaacacatggtattttaaattattatag
tatgttcagtatatttgatatattttagtggtgtcttgagtcacttcaga
actgctaaacaatatttttctattttttctttttttgttgtttgtttttg
ttttgagacagggttttcttctgaatgccccttggctgtccaagaactca
ctctgtagatcaggctggcctcaaactcagaaatcactttgctctgcttc
ccaaatcttacttgcctctgcctccaagtgctggataaagtgtgcactac
actgcccagctaaaacaattctaccaatatgagaatgatgagacagctgt
atctggtcctttcagccaatctgctagtatgcattggttcagc

gaattccaagcagaatgtgtactgtgaggttagtactccaaagaaaatag
tcacattagtaaatcacacacatttaagtaaataagtataaaatgacata
taagagactttgaagaggttttaaccaatgacaatgttgggggaaggtaa
aaataataagtcaacactgtaaagaatgttgtcaaaatgctctgtaaaac
atcctgacattatttatggtgatttttttttccactaagaatcctcaaat
tgactggttataaattaattgataattttaaaagtctaaaacaagtcaca
gagttgaaggggtttacaaccccatagaaagaacaacaatatcaaccaac
cagacaccccagagctctcaggaactaaaccaccgaccaaagagtactca
tggaggaacccaggctccaactgcatatatagcagaggatggccttatgc
tgcatcagtgggaggggaagcccttaattctgtggaagctccatgctcca
gtgtggggcaatgcaagggtggtaaggcaggagtgggtggatgggaagca
ccctcttagaaacaggagggatggagcatggggaagggggattgtgtgtg
tggaaacctggaagagggataatgttaaatgtaaataaataaaaataacc
tataataaaaagtataaaaagtaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101865999_101867156
seq2: B6Ng01-248F08.b_44_1186

seq1  GAATTCTCTTTCTGGTTTGCATACTTAAAATGTATGTATTGGTTGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTCTGGTTTGCATACTTAAAATGTATGTATTGGTTGATTTA  50

seq1  TATATAATATTTCCTGAGTCAGAATTTATTTAAAAGCTATCTGATCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATATTTCCTGAGTCAGAATTTATTTAAAAGCTATCTGATCATGG  100

seq1  TGACATTTTCTAGTAGATATAACTATATTTAAGTAACACAAAAAGGTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTTCTAGTAGATATAACTATATTTAAGTAACACAAAAAGGTTAA  150

seq1  GTAATTTAAATAACTAGTTCATTCATGTGAATCTTTTTTTTTCCAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAAATAACTAGTTCATTCATGTGAATCTTTTTTTTTCCAGAAAA  200

seq1  ACTAAACTCCAAACTATTCTGTCTTTTTCAACTATTGAAAATGTAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACTCCAAACTATTCTGTCTTTTTCAACTATTGAAAATGTAAACAT  250

seq1  AAAACTATTCATGGTTATGGGAACAAACACTGAAGACTCCAAAAGTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATTCATGGTTATGGGAACAAACACTGAAGACTCCAAAAGTTGCA  300

seq1  AATTTTAATTTATTATATGACAGATTTTAAGGTCACCAGTTCCAAACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAATTTATTATATGACAGATTTTAAGGTCACCAGTTCCAAACCTG  350

seq1  CTAATGTGTTACTTTGACAACACATAGAACTATTTTGTTCACTAATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGTTACTTTGACAACACATAGAACTATTTTGTTCACTAATGAAT  400

seq1  ACTTTAATTTGAGCTACTAATTTAAAGAGTTGGAAAACATCAATAGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATTTGAGCTACTAATTTAAAGAGTTGGAAAACATCAATAGACTC  450

seq1  TAACGTTGCATTTATCACCCTAACTTACATTACATTACATTACTTACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTTGCATTTATCACCCTAACTTACATTACATTACATTACTTACATC  500

seq1  ACCTAACTTACATTACATTTCCTTAACAGATACTTAATAGTCTTTCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACTTACATTACATTTCCTTAACAGATACTTAATAGTCTTTCAATG  550

seq1  GGTTGCTTTAATTATGTAATTCTAATGTGGTTTTAGTTATTTAAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTTTAATTATGTAATTCTAATGTGGTTTTAGTTATTTAAACATTT  600

seq1  AAAAAATGCTTCTTGTAGCTTATTGTTCAAAAAAAAAAAAACCAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGCTTCTTGTAGCTTATTGTTCAAAAAAAAAAAAACCAAACAAA  650

seq1  CATACTATTGAGTCATCCCTAATGATGACTCAGTCCACTGAAAATAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTATTGAGTCATCCCTAATGATGACTCAGTCCACTGAAAATAAATA  700

seq1  AAATACACAAATTACAGATAAAATTTATTAAAAGTGTATATTATAGACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACAAATTACAGATAAAATTTATTAAAAGTGTATATTATAGACTG  750

seq1  CATATTTTTGTGGAGCTATGTCCAACACATGGTATTTTAAATTATTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGTGGAGCTATGTCCAACACATGGTATTTTAAATTATTATAG  800

seq1  TATGTTCAGTATATTTGATATATTTTAGTGGTGTCTTGAGTCACTTCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCAGTATATTTGATATATTTTAGTGGTGTCTTGAGTCACTTCAGA  850

seq1  ACTGCTAAACAATTATTTTTCTATTTTTTCTTTTTTTGTTTGTTTGTTTT  900
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  ACTGCTAAACAA-TATTTTTCTATTTTTTCTTTTTTTG-TTGTTTGTTTT  898

seq1  TGTTTTTGAGACAGGGTTT--CTCTGAATGCCCC-TGGCTGTCCAGGAAC  947
      || ||||||||||||||||   |||||||||||| |||||||||| ||||
seq2  TG-TTTTGAGACAGGGTTTTCTTCTGAATGCCCCTTGGCTGTCCAAGAAC  947

seq1  TCACTCTGTAGATCAGGCTGGCCTCAAACTCAGAAATCCACTTGCCTCTG  997
      ||||||||||||||||||||||||||||||||||||| |||||  |||||
seq2  TCACTCTGTAGATCAGGCTGGCCTCAAACTCAGAAAT-CACTTTGCTCTG  996

seq1  CCTCCCAAATC-TACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTG  1046
      | ||||||||| ||| ||||||||||| ||||||||| ||||  || |||
seq2  CTTCCCAAATCTTACTTGCCTCTGCCT-CCAAGTGCT-GGAT--AAAGTG  1042

seq1  TGCACTACCACTGCCCAGCTAAAACAATTCTTAACAATATGAGAATGAAT  1096
      ||||||| |||||||||||||||||||||| || ||||||||||||||  
seq2  TGCACTA-CACTGCCCAGCTAAAACAATTC-TACCAATATGAGAATGA--  1088

seq1  GGGAGACAGCTGTATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGC  1146
        ||||||||||||||| ||||||||||||  |||| |||||  ||||||
seq2  -TGAGACAGCTGTATCT-GGTCCTTTCAGC-CAATC-TGCTA--GTATGC  1132

seq1  AATGGTGTCAGC  1158
      | |||| |||||
seq2  ATTGGT-TCAGC  1143


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