BAC Information

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BAC

Clone NameB6Ng01-248G23
Chromosome10 (Build37)
Map Location 24,383,621 - 24,497,709
singlet/doubletdoublet
Overlap geneEnpp1, Enpp3
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537, Ctgf
Downstream geneCrsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800, Epb4.1l2, 2010003K15Rik, EG667513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248G23.bB6Ng01-248G23.g
ACCGA056516GA056517
length1,0801,087
definitionB6Ng01-248G23.b B6Ng01-248G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,383,621 - 24,384,698)(24,496,623 - 24,497,709)
sequence
gaattcaccgatcagaagaaaacagaacacagacgcagggaggaagaagt
tcatgtcaccttgggcattgatgctctatgctccatgacatgtgaatggc
atggtgatgtgaactcagaaagagggaattgttgctttaagctacggtgg
ccatagccaggaactggctacgtttctaaaatatggaaggtcaaatacga
aacattatgatctttattccgtaggtaactggctcccatccctagtgtca
cagtagctaacattaagtaatttttttcctggttcttcacttttaatagt
gtctaccatgctttcaagccccactcttaagtaataagtttggctcccag
gcaggagagtgtctcctaagaagagtaagaagaggatatatccacagaaa
tctgcagtcttggatacttaaagacttctcatagagcactcaggtttgaa
ggaaaagggaggataaaagattcagagctgacggtgatttcattcaacag
ttcaatgtatcgctgtaaaaactgtaagcaaagccagttctctcagctct
tgttttgtttaaattgttctctctggctacatagaatttcatgtacatag
ttacatggttacatagaatttctttccaaaaagcataatatctttctttc
cagaagtcacagtcccttacagaaggttcttgaagtccacttcaggaata
ctaaatttaacgaagtgattataggtagcggtgaacttacctcgctgctg
actggtccatgtgaatgccctgaagaatctggttcttctaaatacagagt
gtaaaagtgtggtctaaatcaaacagtatcaaaatgtaacattttacgaa
cacattgaaaaacagagtggaaagaataattcaacagttgatcctgatta
aaaatcctacatccctggggaagcatccctaaaactctgaggagccattt
acaagcttaggattcttcaaaatgaagctgtattgttcactagttgcttc
tggctataaattcatcagagcaaacaacagttttgtttgtagtctgtata
gattgtctatgaaacaaagcgtctttgtac
gaattcaaaagtaagtatctaccttcccctgtcccacactgggcattaag
ggagtggctcacctatgctgaacaagcactgtgccctaacccatgtactt
ggccctgtatgctcagtctgttgctattctttattttgcaatagggtctg
gataagttgaccaggctgaccttgaacaaactttgtagtccagtcaggcc
ttgaacttgttatcctttcttctaatcccccagaatagctggggttacag
gcttggtggtgtatatgtattaatgctaaattaaaaaagcgattccttgg
ctggccaaactaaacctacactttagaattgcaatttgttattcgcactg
agtcattttattctgttattttaaataggggcacaaacactgtgggtgtt
atttctttgtgactaactacaattttgacttgttgctagaatttgataat
tgttttaagttttttctttttcttttttttttttttttttttttggtttt
tcgagacagggtttctctgtatagtcctggttgtcctggaactcactttg
tagactaggttggcctcgaactcagaaatcctcctgcctctgcctcccaa
gtgctgggattaaaggcgtgcgccaccacacctggcttaagttttttctt
aatccttacctgttaagagctattgatagagcgaaatttttattaacatt
caccataagtgaaaaaaatgtaaatgtctgtttccagaatgataattagt
aagatagtacctgtggtctgaagattattaataatcactgttgaaaggaa
tttggagacatattttgctcttaataaaatgataaaaagttctcatcaac
atggctgccttatttttagtggcataactatcttgtagaattatcccaat
caccatgggcaattactggagtggaatgtggtgctattaaatgcaccaac
aatagaaaatatttgcacatcagtaatcagatattttcacaatattcttc
atttgtttccacttttagaatgtgggactacctttcatgagtctctataa
atatgcttatagaaggatgactgaatgtggtagtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24383621_24384698
seq2: B6Ng01-248G23.b_46_1125

seq1  GAATTCACCGATCAGAAGAAAACAGAACACAGACGCAGGGAGGAAGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCGATCAGAAGAAAACAGAACACAGACGCAGGGAGGAAGAAGT  50

seq1  TCATGTCACCTTGGGCATTGATGCTCTATGCTCCATGACATGTGAATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCACCTTGGGCATTGATGCTCTATGCTCCATGACATGTGAATGGC  100

seq1  ATGGTGATGTGAACTCAGAAAGAGGGAATTGTTGCTTTAAGCTACGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATGTGAACTCAGAAAGAGGGAATTGTTGCTTTAAGCTACGGTGG  150

seq1  CCATAGCCAGGAACTGGCTACGTTTCTAAAATATGGAAGGTCAAATACGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGCCAGGAACTGGCTACGTTTCTAAAATATGGAAGGTCAAATACGA  200

seq1  AACATTATGATCTTTATTCCGTAGGTAACTGGCTCCCATCCCTAGTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATGATCTTTATTCCGTAGGTAACTGGCTCCCATCCCTAGTGTCA  250

seq1  CAGTAGCTAACATTAAGTAATTTTTTTCCTGGTTCTTCACTTTTAATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCTAACATTAAGTAATTTTTTTCCTGGTTCTTCACTTTTAATAGT  300

seq1  GTCTACCATGCTTTCAAGCCCCACTCTTAAGTAATAAGTTTGGCTCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACCATGCTTTCAAGCCCCACTCTTAAGTAATAAGTTTGGCTCCCAG  350

seq1  GCAGGAGAGTGTCTCCTAAGAAGAGTAAGAAGAGGATATATCCACAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGAGTGTCTCCTAAGAAGAGTAAGAAGAGGATATATCCACAGAAA  400

seq1  TCTGCAGTCTTGGATACTTAAAGACTTCTCATAGAGCACTCAGGTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTCTTGGATACTTAAAGACTTCTCATAGAGCACTCAGGTTTGAA  450

seq1  GGAAAAGGGAGGATAAAAGATTCAGAGCTGACGGTGATTTCATTCAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGGAGGATAAAAGATTCAGAGCTGACGGTGATTTCATTCAACAG  500

seq1  TTCAATGTATCGCTGTAAAAACTGTAAGCAAAGCCAGTTCTCTCAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTATCGCTGTAAAAACTGTAAGCAAAGCCAGTTCTCTCAGCTCT  550

seq1  TGTTTTGTTTAAATTGTTCTCTCTGGCTACATAGAATTTCATGTACATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTAAATTGTTCTCTCTGGCTACATAGAATTTCATGTACATAG  600

seq1  TTACATGGTTACATAGAATTTCTTTCCAAAAAGCATAATATCTTTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGTTACATAGAATTTCTTTCCAAAAAGCATAATATCTTTCTTTC  650

seq1  CAGAAGTCACAGTCCCTTACAGAAGGTTCTTGAAGTCCACTTCAGGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCACAGTCCCTTACAGAAGGTTCTTGAAGTCCACTTCAGGAATA  700

seq1  CTAAATTTAACGAAGTGATTATAGGTAGCGGTGAACTTACCTCGCTGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTTAACGAAGTGATTATAGGTAGCGGTGAACTTACCTCGCTGCTG  750

seq1  ACTGGTCCATGTGAATGCCCTGAAGAATCTGGTTCTTCTAAATACAGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCCATGTGAATGCCCTGAAGAATCTGGTTCTTCTAAATACAGAGT  800

seq1  GTAAAAGTGTGGTCTAAATCAAACAGTATCAAAATGTAACATTTTACGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTGTGGTCTAAATCAAACAGTATCAAAATGTAACATTTTACGAA  850

seq1  CACATTGAAAAACAGAGTGGAAAGAATAATTCAACAGTTGATCCTGATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGAAAAACAGAGTGGAAAGAATAATTCAACAGTTGATCCTGATTA  900

seq1  AAAATCCTACATCCCTGGGGAAGCATCCCTAAAACTCTGAGGAGCCATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCTACATCCCTGGGGAAGCATCCCTAAAACTCTGAGGAGCCATTT  950

seq1  ACAAGCTTAGGATTCTTCAAAATGAAGCTGTAATTGTTCACTAGTTGC-T  999
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  ACAAGCTTAGGATTCTTCAAAATGAAGCTGT-ATTGTTCACTAGTTGCTT  999

seq1  CTGGCTATAAA-TCATCAGAGCAAACAACAGTTTTG-TTGTAGTCTGTAT  1047
      ||||||||||| |||||||||||||||||||||||| |||||||||||||
seq2  CTGGCTATAAATTCATCAGAGCAAACAACAGTTTTGTTTGTAGTCTGTAT  1049

seq1  AGA-TGTCTATGAAACAAAGCGGCCTTTGTAC  1078
      ||| ||||||||||||||||| | ||||||||
seq2  AGATTGTCTATGAAACAAAGC-GTCTTTGTAC  1080

seq1: chr10_24496623_24497709
seq2: B6Ng01-248G23.g_66_1152 (reverse)

seq1  TCCACTAACCACATTCAGTCCATTTCTTTCTAT-AGCATATTTTATAAGA  49
      |||||| |||||||||||||    || |||||| |||||| |||||    
seq2  TCCACT-ACCACATTCAGTC---ATCCTTCTATAAGCATA-TTTAT----  41

seq1  AGAACCTCATGGAA-GTAGTCCCACATTTCTAAAAGTG--AAAAAATGA-  95
      |||  |||||| || ||||||||||| |||||||||||  || |||||| 
seq2  AGAGACTCATGAAAGGTAGTCCCACA-TTCTAAAAGTGGAAACAAATGAA  90

seq1  -GATA-TGTGAAAATATCTGATTTTACTGAATGTGCAAATATTTTCTATT  143
        ||| |||||||||||||||  |||||| ||||||||||||||||||||
seq2  GAATATTGTGAAAATATCTGA--TTACTG-ATGTGCAAATATTTTCTATT  137

seq1  GTTGGTGCATTTAAATAGCACCACATTCCACTCCAGTAATTGCCCATGGT  193
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGCATTT-AATAGCACCACATTCCACTCCAGTAATTGCCCATGGT  186

seq1  GATT-GGATAATTCTACAAGATAGTTATGCAACT-AAAATAA-GCAGCCA  240
      |||| ||||||||||||||||||||||||| ||| ||||||| |||||||
seq2  GATTGGGATAATTCTACAAGATAGTTATGCCACTAAAAATAAGGCAGCCA  236

seq1  TGTTGATGAGAACTTTTTATCATTTTATT-AGAGC-AAATATGTCTCCAA  288
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  TGTTGATGAGAACTTTTTATCATTTTATTAAGAGCAAAATATGTCTCCAA  286

seq1  ATTCC-TTCAACAGTGATTATTAATAATCTTCAGACCACAGGTACTATCT  337
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCAACAGTGATTATTAATAATCTTCAGACCACAGGTACTATCT  336

seq1  TACTAATTATCATTCTGGAAACAGACATTTACATTTTTTTCACTTATGGT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTATCATTCTGGAAACAGACATTTACATTTTTTTCACTTATGGT  386

seq1  GAATGTTAAT-AAAATTTCGCTCTATCAATAGCTCTTAACAGGTAAGGAT  436
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTAATAAAAATTTCGCTCTATCAATAGCTCTTAACAGGTAAGGAT  436

seq1  TAAGAAAAAACTTAAGCCAGGTGTGGTGGCGCACGCCTTTAATCCCAGCA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAAAACTTAAGCCAGGTGTGGTGGCGCACGCCTTTAATCCCAGCA  486

seq1  CTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAACCTAGTCT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCCAACCTAGTCT  536

seq1  ACAAAGTGAGTTCCAGGACAACCAGGACTATACAGAGAAACCCTGTCTCG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCCAGGACAACCAGGACTATACAGAGAAACCCTGTCTCG  586

seq1  AAAAACCAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACTTAAAAC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACTTAAAAC  636

seq1  AATTATCAAATTCTAGCAACAAGTCAAAATTGTAGTTAGTCACAAAGAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAAATTCTAGCAACAAGTCAAAATTGTAGTTAGTCACAAAGAAA  686

seq1  TAACACCCACAGTGTTTGTGCCCCTATTTAAAATAACAGAATAAAATGAC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACCCACAGTGTTTGTGCCCCTATTTAAAATAACAGAATAAAATGAC  736

seq1  TCAGTGCGAATAACAAATTGCAATTCTAAAGTGTAGGTTTAGTTTGGCCA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCGAATAACAAATTGCAATTCTAAAGTGTAGGTTTAGTTTGGCCA  786

seq1  GCCAAGGAATCGCTTTTTTAATTTAGCATTAATACATATACACCACCAAG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGAATCGCTTTTTTAATTTAGCATTAATACATATACACCACCAAG  836

seq1  CCTGTAACCCCAGCTATTCTGGGGGATTAGAAGAAAGGATAACAAGTTCA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAACCCCAGCTATTCTGGGGGATTAGAAGAAAGGATAACAAGTTCA  886

seq1  AGGCCTGACTGGACTACAAAGTTTGTTCAAGGTCAGCCTGGTCAACTTAT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGACTGGACTACAAAGTTTGTTCAAGGTCAGCCTGGTCAACTTAT  936

seq1  CCAGACCCTATTGCAAAATAAAGAATAGCAACAGACTGAGCATACAGGGC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCTATTGCAAAATAAAGAATAGCAACAGACTGAGCATACAGGGC  986

seq1  CAAGTACATGGGTTAGGGCACAGTGCTTGTTCAGCATAGGTGAGCCACTC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACATGGGTTAGGGCACAGTGCTTGTTCAGCATAGGTGAGCCACTC  1036

seq1  CCTTAATGCCCAGTGTGGGACAGGGGAAGGTAGATACTTACTTTTGAATT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGCCCAGTGTGGGACAGGGGAAGGTAGATACTTACTTTTGAATT  1086

seq1  C  1087
      |
seq2  C  1087