BAC Information

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BAC

Clone NameB6Ng01-248J02
Chromosome10 (Build37)
Map Location 14,122,034 - 14,246,346
singlet/doubletdoublet
Overlap geneGpr126, LOC100039571
Upstream geneFuca2, Pex3, Deadc1, Aig1, EG666859, Hivep2
Downstream geneLOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917, LOC637043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248J02.bB6Ng01-248J02.g
ACCGA056610GA056611
length1,0531,096
definitionB6Ng01-248J02.b B6Ng01-248J02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,245,300 - 14,246,346)(14,122,034 - 14,123,148)
sequence
gaattcattgctatagtttctgaaaatatatgtataactccatggcttca
cacataaatatacagatattaaatatgtttcatacacacacacacacaca
cacacacacacacacacacacatatatatatatatatacatcacacatac
acataaatatgaaattatgaaatttgcaggtaaatggataaaactagaaa
agatcatattgagtgaggtaacccagacctagagagatgaacattacgtg
ttctaccttgtctgaggctcttagcaccaaatcgttagataagagcacat
agcctggaataactacataaaccaggatagtaaaatggaaccagtgcaag
gggcgggggatagagaggggattagcaaagtacaagtggtctgaggctgg
tagtggagaagtaggaggggctctaactaggggtgggaagggatatatac
tgaataaagggaagaaggcggaacaacagtagggatgtccgcaaacgtca
tactcttaactatctacctaaaaatacctctaatgcatggaagctggtat
ataaatatacatttatgtttgaaatgaaaatctcccacaagccatagact
atcttacaaaacctcaatagcaggcagagttcttcttttaagttgctggt
cagagttgcccacaagactgccaaagcactgtaggttactgctgctgccc
tggttgccctccagaggtggaagcctaagcccctgctcctgaagacccca
tgcacactggacacaaggcccagcaacccccagctggttatttcatatcg
ctctataaatatatgttagtgttgtatcacattttcaaaatgtcgtgata
tcttttaagctattttgaaagtatttggcagcaagcccctaaaggtgaca
tcacatatggatgggacatcccccaaactggttgtaatagctttccatga
aagagatttagtatcttaacaagaaaagttaccattccatgttccactca
ccatttttaaagatataaatattcattacttatcaggtataatgggggga
aaa
catacttttgtttcctcttcttttttttccttttcttccttccttccttt
ctttcctttactcatttatttttttggatgctttagactttgcttcaaag
gaaataaaagcctaagttatgtttaagctgccccacagcctggctctgtg
ttagttatcctaagaaactctaacgtcagagtgcattaatcctgggacct
ggaccttcgtcatatattcattcctagtgttttggcaaagttgccgcatg
tcattggatttattggtggcagggttattttccagttgtcaaataatgtt
tttccctatttaggaggcagaaatagaaacgatccctcataaaggaactg
aataatttggaacatgaacaatataagtatttatttgaaaaaaaatcatt
ttccatttcagtaaaatggcaaatcagctttagcagtttctcactactaa
ttctagtttgccctcacagttgctttacctgtcatattcaacaatatcac
tacagaaaactgtttcacaatatttttttctagaaaaaaagtacagtctc
tctaatgggcagttaattaaaacaacaaagctgggtgaaagaaagctaag
atatgaaacaaactgacgtgaacacaaataaataaatatgtacagaagag
acattgccaaaggtactctacacagtaagaaacagtgacaagaatggacc
ctaggctaaacctggaacacatcacagtgaaaggagagggtgggaagcga
atagccagagtcaggattggggctgttttacagctgtgtgtagcctgaac
tctgggtctcccatggagccctgtcccactcttctgaggaggcaaatgag
agccacagacttgtaactgaaggcaaaatttgggaccagtcgtttaatcc
acttgcaatatgtttgggcctgttgttcttaattttttctttctttctac
ctggtattggagattttttaaaatggagctgacatcattgccaaatattg
aaatatcaaagatcttttctcagatctcaatgctagtagaaaaaccaaac
aaacaaccaagcgaagccacattgaacgaatcatattcatcagcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14245300_14246346
seq2: B6Ng01-248J02.b_47_1099 (reverse)

seq1  -TTTTCCCCCATTATACTTGATAAGTTATGAATATTTATATCTTTAAAAA  49
       ||| |||||||||||| |||||||| |||||||||||||||||||||||
seq2  TTTTCCCCCCATTATACCTGATAAGTAATGAATATTTATATCTTTAAAAA  50

seq1  T-GTGAGTGAAACAT-GAATGGTAAACTTTTCTTGTT-AGATACCTAAAT  96
      | ||||||| ||||| ||||||| ||||||||||||| ||||| ||||| 
seq2  TGGTGAGTGGAACATGGAATGGT-AACTTTTCTTGTTAAGATA-CTAAA-  97

seq1  TCTC-TTCATGGAAAGCTATTACAACCAGTTT-GGGGATGT-CCATCCAT  143
      |||| ||||||||||||||||||||||||||| |||||||| ||||||||
seq2  TCTCTTTCATGGAAAGCTATTACAACCAGTTTGGGGGATGTCCCATCCAT  147

seq1  ATGTGATGTCACCCTTAGGGGCTTGCTGCCAAATACTTTC-AAATAGCTT  192
      ||||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  ATGTGATGTCACCTTTAGGGGCTTGCTGCCAAATACTTTCAAAATAGCTT  197

seq1  TAAAGATATCACGACATTTTGAAAATGTGATACAACACTAACATATATTT  242
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATATCACGACATTTTGAAAATGTGATACAACACTAACATATATTT  247

seq1  ATAGAGCGATATG-AATAACCAGCTGGGGGTTGCTGGGCCTTGTGTCCAG  291
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCGATATGAAATAACCAGCTGGGGGTTGCTGGGCCTTGTGTCCAG  297

seq1  TGTGCATGGGGTCTTCAGGAGCAGGGGCTTAGGCTTCCACCTCTGGAGGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGGGGTCTTCAGGAGCAGGGGCTTAGGCTTCCACCTCTGGAGGG  347

seq1  CAACCAGGGCAGCAGCAGTAACCTACAGTGCTTTGGCAGTCTTGTGGGCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGGCAGCAGCAGTAACCTACAGTGCTTTGGCAGTCTTGTGGGCA  397

seq1  ACTCTGACCAGCAACTTAAAAGAAGAACTCTGCCTGCTATTGAGGTTTTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGACCAGCAACTTAAAAGAAGAACTCTGCCTGCTATTGAGGTTTTG  447

seq1  TAAGATAGTCTATGGCTTGTGGGAGATTTTCATTTCAAACATAAATGTAT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTCTATGGCTTGTGGGAGATTTTCATTTCAAACATAAATGTAT  497

seq1  ATTTATATACCAGCTTCCATGCATTAGAGGTATTTTTAGGTAGATAGTTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATACCAGCTTCCATGCATTAGAGGTATTTTTAGGTAGATAGTTA  547

seq1  AGAGTATGACGTTTGCGGACATCCCTACTGTTGTTCCGCCTTCTTCCCTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATGACGTTTGCGGACATCCCTACTGTTGTTCCGCCTTCTTCCCTT  597

seq1  TATTCAGTATATATCCCTTCCCACCCCTAGTTAGAGCCCCTCCTACTTCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGTATATATCCCTTCCCACCCCTAGTTAGAGCCCCTCCTACTTCT  647

seq1  CCACTACCAGCCTCAGACCACTTGTACTTTGCTAATCCCCTCTCTATCCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACCAGCCTCAGACCACTTGTACTTTGCTAATCCCCTCTCTATCCC  697

seq1  CCGCCCCTTGCACTGGTTCCATTTTACTATCCTGGTTTATGTAGTTATTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCCTTGCACTGGTTCCATTTTACTATCCTGGTTTATGTAGTTATTC  747

seq1  CAGGCTATGTGCTCTTATCTAACGATTTGGTGCTAAGAGCCTCAGACAAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTATGTGCTCTTATCTAACGATTTGGTGCTAAGAGCCTCAGACAAG  797

seq1  GTAGAACACGTAATGTTCATCTCTCTAGGTCTGGGTTACCTCACTCAATA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACACGTAATGTTCATCTCTCTAGGTCTGGGTTACCTCACTCAATA  847

seq1  TGATCTTTTCTAGTTTTATCCATTTACCTGCAAATTTCATAATTTCATAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTCTAGTTTTATCCATTTACCTGCAAATTTCATAATTTCATAT  897

seq1  TTATGTGTATGTGTGATGTATATATATATATATATGTGTGTGTGTGTGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTATGTGTGATGTATATATATATATATATGTGTGTGTGTGTGTG  947

seq1  TGTGTGTGTGTGTGTGTGTGTGTATGAAACATATTTAATATCTGTATATT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTATGAAACATATTTAATATCTGTATATT  997

seq1  TATGTGTGAAGCCATGGAGTTATACATATATTTTCAGAAACTATAGCAAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGAAGCCATGGAGTTATACATATATTTTCAGAAACTATAGCAAT  1047

seq1  GAATTC  1047
      ||||||
seq2  GAATTC  1053

seq1: chr10_14122034_14123148
seq2: B6Ng01-248J02.g_74_1169

seq1  CATACTTTTGTTTCCTCTTCTTTTTTTTCCTTTTCTTCCTTCCTTCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTTTGTTTCCTCTTCTTTTTTTTCCTTTTCTTCCTTCCTTCCTTT  50

seq1  CTTTCCTTTACTCATTTATTTTTTTGGATGCTTTAGACTTTGCTTCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTTACTCATTTATTTTTTTGGATGCTTTAGACTTTGCTTCAAAG  100

seq1  GAAATAAAAGCCTAAGTTATGTTTAAGCTGCCCCACAGCCTGGCTCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAAGCCTAAGTTATGTTTAAGCTGCCCCACAGCCTGGCTCTGTG  150

seq1  TTAGTTATCCTAAGAAACTCTAACGTCAGAGTGCATTAATCCTGGGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTATCCTAAGAAACTCTAACGTCAGAGTGCATTAATCCTGGGACCT  200

seq1  GGACCTTCGTCATATATTCATTCCTAGTGTTTTGGCAAAGTTGCCGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTCGTCATATATTCATTCCTAGTGTTTTGGCAAAGTTGCCGCATG  250

seq1  TCATTGGATTTATTGGTGGCAGGGTTATTTTCCAGTTGTCAAATAATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGATTTATTGGTGGCAGGGTTATTTTCCAGTTGTCAAATAATGTT  300

seq1  TTTCCCTATTTAGGAGGCAGAAATAGAAACGATCCCTCATAAAGGAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATTTAGGAGGCAGAAATAGAAACGATCCCTCATAAAGGAACTG  350

seq1  AATAATTTGGAACATGAACAATATAAGTATTTATTTGAAAAAAAATCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTGGAACATGAACAATATAAGTATTTATTTGAAAAAAAATCATT  400

seq1  TTCCATTTCAGTAAAATGGCAAATCAGCTTTAGCAGTTTCTCACTACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCAGTAAAATGGCAAATCAGCTTTAGCAGTTTCTCACTACTAA  450

seq1  TTCTAGTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTTTGCCCTCACAGTTGCTTTACCTGTCATATTCAACAATATCAC  500

seq1  TACAGAAAACTGTTTCACAATATTTTTTTCTAGAAAAAAAGTACAGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAAACTGTTTCACAATATTTTTTTCTAGAAAAAAAGTACAGTCTC  550

seq1  TCTAATGGGCAGTTAATTAAAACAACAAAGCTGGGTGAAAGAAAGCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGGGCAGTTAATTAAAACAACAAAGCTGGGTGAAAGAAAGCTAAG  600

seq1  ATATGAAACAAACTGACGTGAACACAAATAAATAAATATGTACAGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAACAAACTGACGTGAACACAAATAAATAAATATGTACAGAAGAG  650

seq1  ACATTGCCAAAGGTACTCTACACAGTAAGAAACAGTGACAAGAATGGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCCAAAGGTACTCTACACAGTAAGAAACAGTGACAAGAATGGACC  700

seq1  CTAGGCTAAACCTGGAACACATCACAGTGAAAGGAGAGGGTGGGAAGCGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTAAACCTGGAACACATCACAGTGAAAGGAGAGGGTGGGAAGCGA  750

seq1  ATAGCCAGAGTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCCTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGAGTCAGGATTGGGGCTGTTTTACAGCTGTGTGTAGCCTGAAC  800

seq1  TCTGGGTCTCCCATGGAGCCCTGTCCCACTCTTCTGAGGAGGCAAATGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCTCCCATGGAGCCCTGTCCCACTCTTCTGAGGAGGCAAATGAG  850

seq1  AGCCACAGACTTGTAACTGAAGGCAAAATTT-GGACCAGTCGTTTAAATC  899
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  AGCCACAGACTTGTAACTGAAGGCAAAATTTGGGACCAGTCGTTT-AATC  899

seq1  CACTTGCAAATATGTTT-GGCCTGTTGTTTCTTAATTTTTTTCTTTCTTT  948
      ||||||| ||||||||| ||||||||| ||||||| ||||||||||||||
seq2  CACTTGC-AATATGTTTGGGCCTGTTG-TTCTTAA-TTTTTTCTTTCTTT  946

seq1  TCTTACCTGGTTATTGGAGA-TTTTTAAAATGGAGCTGACATCATTGCCA  997
         ||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  --CTACCTGG-TATTGGAGATTTTTTAAAATGGAGCTGACATCATTGCCA  993

seq1  AATATGAAAAAAATAAAAAAAGATC-TTTCTCAGATCTCAATGCTAGTAA  1046
      |||||  |||     |  ||||||| |||||||||||||||||||||| |
seq2  AATATTGAAA----TATCAAAGATCTTTTCTCAGATCTCAATGCTAGT-A  1038

seq1  GAAAAAACAAAACAAAACAAAACAAAAGCAAAGCCACATTTGAAACAAAA  1096
      |||||| ||||   ||||||     |||| |||||||| |||||    ||
seq2  GAAAAACCAAA--CAAACAA---CCAAGCGAAGCCACA-TTGAA--CGAA  1080

seq1  TCATAATTTCTATCAGCTA  1115
      |||||  ||| ||||||||
seq2  TCATA--TTC-ATCAGCTA  1096