BAC Information

Click to search

BAC

Clone NameB6Ng01-249B05
Chromosome10 (Build37)
Map Location 52,988,170 - 52,988,247
singlet/doubletsinglet
Overlap genenone
Upstream geneDcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
Downstream genePln, EG432460, Mcm9, Asf1a, LOC100042554, 4930589M24Rik, Man1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249B05.bB6Ng01-249B05.g
ACCGA056987GA056988
length7851,204
definitionB6Ng01-249B05.b B6Ng01-249B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacagaggaatcacaaatggctgaaaaacacttaaagaaatg
ttcaatatccttagtcattaggaaaatacaagtgaaaacaaccttgagat
tccacctcaaacaagtcatattggctaagatcaaatatgtaggtgacagc
agatgttgaacaggccctggagaaagagaaacactcctccactgctggta
ggacagcaggctggtaaaaccactttggaaatcaatctggtggttcctga
gaaagttggaaatagttttacctaaagacccagcaatacctctcctaagc
atatacccaaaaaaatattccaacatataacaaggactcctgctccagta
tgcttgtagcagtcttatgtaaaataaccagaagctggaaacaacccaga
tttccctcaacaaaagaatggatacagaaaatgtggtacattcacagaat
ggagtactagtcaactattaaaaacaatgacttcataaaattcgaaggca
attggaaggaaactagaaaatatcatcctgagtgaggtaaaccagacaca
aaagaacacacatgtatgtattcactgataagtggatattaaccccaaaa
tcacaatgctcatgatacaacccacagaacatatggtgcttagaaggaag
accagagtatggatgcttcagtccttcattaaggggagaacagatgatca
tatgagatggaggtagaatgggacctaggagagacagaggaagggaagga
aataggggatgggggcaagtataaggtactgaaag
gaattccatgtgaaaatgtcttccctactggctatatttcttagtgccag
aaggtaatacgcaggctgataggggagaagagacatcagtggtcttaccc
agtactacaaatacccctcccccccaaggagaagtttgtcaactgcttca
atactgacgtagctgctatggaatgattcatcctcatcacattttgatta
ttcttattttctgtgtgaagtgcaccatggaaaattaaaagtggacacat
gctcaaaagagaattatattccctttcctagtgaaagaaatatgaaattt
caagacctgtaagtcatataaagtcctcagaaattgctggttgtttgtga
gtctagaggctgcctggggctgagaaaaaagaaaagcaaacctggatatg
ccccgtagttaaaatattcctgggaacagcttaaccttaaagataaagag
gaatgtgaggacataacagggctatctaaactgagtcaacaattcacaga
actctgacaccctgcacgtacatgtaatttttctgctgatgtttgaataa
gccaatagtgtgttgatatgctgaattccacatccttaagacccttaacc
cataaaaactcctagcttcctagcctcgtggccatcatccgttatctcct
gtgtgggatgcatgtcagcctggagctccataattaaatgacctcatgta
attacatcaagatggtccttcacgattttttgggtgcacaacgaatcggg
tattgagttggggtttccccactaggttctatcactagcaactaaccatt
gagagtagttccaccaataagggacatggcatgaagaacacccttattat
ctatgctcagattaaggcttgctgtgttttcagcaagtcttgtgcaagta
gcaacacatgagctcctctcagttcatgagtgtaataattatgtcatcct
taggagacagaatttcctagcactcttcttcacccttaagacctttcatt
ctttctacttcctctcacaggttccacagctttggcaagcttggaggggc
acagtgttactctatgctcattcaagcctgatcctcagtctgtgattctt
cttgcactttgacagaagcatcctatctttcattagtacttccttgatga
agttgatctgacagttagaacagctcgttatctatgagcttatttgaaga
ggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_52988170_52988247
seq2: B6Ng01-249B05.b_43_584 (reverse)

seq1  GGGTTACCTCACTCAGGATGATATTTTCTAGTT--CTTTTAAGTGTTTTT  48
      || ||||||||||||||||||||||||||||||  |||  || ||    |
seq2  GGTTTACCTCACTCAGGATGATATTTTCTAGTTTCCTTCCAATTG--CCT  48

seq1  TCGACATTTGAAATTTCTCTGTTGAGAATT--------------------  78
      ||||  |||   |  ||  ||||   |||                     
seq2  TCGAATTTTATGAAGTCATTGTTTTTAATAGTTGACTAGTACTCCATTCT  98

seq1  --------------------------------------------------  78
                                                        
seq2  GTGAATGTACCACATTTTCTGTATCCATTCTTTTGTTGAGGGAAATCTGG  148

seq1  --------------------------------------------------  78
                                                        
seq2  GTTGTTTCCAGCTTCTGGTTATTTTACATAAGACTGCTACAAGCATACTG  198

seq1  --------------------------------------------------  78
                                                        
seq2  GAGCAGGAGTCCTTGTTATATGTTGGAATATTTTTTTGGGTATATGCTTA  248

seq1  --------------------------------------------------  78
                                                        
seq2  GGAGAGGTATTGCTGGGTCTTTAGGTAAAACTATTTCCAACTTTCTCAGG  298

seq1  --------------------------------------------------  78
                                                        
seq2  AACCACCAGATTGATTTCCAAAGTGGTTTTACCAGCCTGCTGTCCTACCA  348

seq1  --------------------------------------------------  78
                                                        
seq2  GCAGTGGAGGAGTGTTTCTCTTTCTCCAGGGCCTGTTCAACATCTGCTGT  398

seq1  --------------------------------------------------  78
                                                        
seq2  CACCTACATATTTGATCTTAGCCAATATGACTTGTTTGAGGTGGAATCTC  448

seq1  --------------------------------------------------  78
                                                        
seq2  AAGGTTGTTTTCACTTGTATTTTCCTAATGACTAAGGATATTGAACATTT  498

seq1  --------------------------------------------  78
                                                  
seq2  CTTTAAGTGTTTTTCAGCCATTTGTGATTCCTCTGTTGAGAATT  542