BAC Information

Click to search

BAC

Clone NameB6Ng01-249I23
Chromosome10 (Build37)
Map Location 82,083,232 - 82,213,369
singlet/doubletdoublet
Overlap gene1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb
Upstream geneSirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716
Downstream gene1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249I23.bB6Ng01-249I23.g
ACCGA057350GA057351
length8641,153
definitionB6Ng01-249I23.b B6Ng01-249I23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,083,232 - 82,084,095)(82,212,227 - 82,213,369)
sequence
gaattcaacatttgaaaatccattcccacaatatttgctaactctctgcc
atgcaccaggcctaggaaataactattggtagttaatgtacccaaaagac
tggaagcagccagcatgtgatgtgcataaagtcatacatgagcaacacac
aattctacctttcagaaagacagagggaaatgggtgcagaatgtatatga
cagagtttgattcccagcaccacaaaggtacaaaaacaatggttttcagt
acagtagaattggaactgtgagtctatcacaataaaattgtagaatcttt
ttactgcttcaaaagaaactcctattccattcccaagtggtccccacaag
ccaactctgtccatatatatttgcccaccatatatcatgtggtcttttat
tgctcaatattttcatgtagtgtttgcaaagttcattcatgtaggatcac
tgaatgctattcccttataaagatgtacatgttttccataggtattcagg
tatctgaattgttcccacctatgaacatgtacagaatcaaacaagtaagt
atgacagatgtcttagtgtttgttggggagaaaactaaactgggaattgc
aggaacatatatgctgtttgaggaactagcagactagttacatataaaaa
cagccgtgtgatattctattcccaagggtagcgtatgaaggttccaattt
ctccctgtccttgacaactgctgtttcattatggccagcagagtagtggt
tctgactgcagattgcatttctctggttgttagaaaatgagcacctctac
acaggcttttggctcagagggtcacttcagaacatggaggaggaagagga
ggaggaggaggaag
gaattccttaccgattaagacatttcacaagtgtttgctacatctgcgta
aggagaactaaagtagctctgaccagggtggcctggccggctggggtggg
ggcagttccctgctgtggcctgtttggtgttgtctgacataaaaaaaaaa
atcttaatttatattttccaatcttagatttctggtgtccagcaaattca
gttttcatgatcggaaggacggacggaaccgggcttgtgtggagagagtc
tgatggagtctgaagcagaggcatgggcggaagtgagggtgaagctgcct
ccttgtaccataagtagctgtaatgtagcttcctgatgcttgactaattg
aggtgttaattctgacttgagaatctttttcatgaatgattttaaaagaa
aaaaaaattggattttaaaggtattaaaatatttttgttttgtacgagag
tttgttgctctgtatgacgcctgtatgcattgtatattgcaatttattac
tgtcagagatttgtagacagtttcttattttcatattgaatcatgttatt
ttgtaattcaagtaagcagctgggttaattcataatgtttaccctttaat
aaaatataagggtagagttcattttgaatgaaagttgcctttattataaa
tttgagtttgtcttggctatatactatcttgcatggtaacttagctagat
gttttagcatttatttattgaaaactttttttgttttgttttggtaaaac
agtcatagcataagcaacttcgttttttaaaaaattttaattgaaaaatt
aagttggatgcagaagcaagtcttgtctggcctattaaacttggtgccct
tcactgtctgtggctgttcaggcagcttcagttactatcacgcctgttag
catttcatttccctttgtgaaatgggtccctctcttcaagtgttacagtc
tccttcacgaaagaggaactttcagtccattgaataagtcattttaacct
tcaacaaaaaaagtcggtcctgttagaaccgtgggaactgagcaatgggc
attgtttctgttgcagatggctgcaggtaaagaatggacaagcaggggaa
gacatggaccactagaatcccgtgatcacggggatctctggttgccgtca
cgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82083232_82084095
seq2: B6Ng01-249I23.b_47_910

seq1  GAATTCAACATTTGAAAATCCATTCCCACAATATTTGCTAACTCTCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATTTGAAAATCCATTCCCACAATATTTGCTAACTCTCTGCC  50

seq1  ATGCACCAGGCCTAGGAAATAACTATTGGTAGTTAATGTACCCAAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCAGGCCTAGGAAATAACTATTGGTAGTTAATGTACCCAAAAGAC  100

seq1  TGGAAGCAGCCAGCATGTGATGTGCATAAAGTCATACATGAGCAACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCAGCCAGCATGTGATGTGCATAAAGTCATACATGAGCAACACAC  150

seq1  AATTCTACCTTTCAGAAAGACAGAGGGAAATGGGTGCAGAATGTATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTACCTTTCAGAAAGACAGAGGGAAATGGGTGCAGAATGTATATGA  200

seq1  CAGAGTTTGATTCCCAGCACCACAAAGGTACAAAAACAATGGTTTTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTGATTCCCAGCACCACAAAGGTACAAAAACAATGGTTTTCAGT  250

seq1  ACAGTAGAATTGGAACTGTGAGTCTATCACAATAAAATTGTAGAATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGAATTGGAACTGTGAGTCTATCACAATAAAATTGTAGAATCTTT  300

seq1  TTACTGCTTCAAAAGAAACTCCTATTCCATTCCCAAGTGGTCCCCACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCTTCAAAAGAAACTCCTATTCCATTCCCAAGTGGTCCCCACAAG  350

seq1  CCAACTCTGTCCATATATATTTGCCCACCATATATCATGTGGTCTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCTGTCCATATATATTTGCCCACCATATATCATGTGGTCTTTTAT  400

seq1  TGCTCAATATTTTCATGTAGTGTTTGCAAAGTTCATTCATGTAGGATCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATATTTTCATGTAGTGTTTGCAAAGTTCATTCATGTAGGATCAC  450

seq1  TGAATGCTATTCCCTTATAAAGATGTACATGTTTTCCATAGGTATTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTATTCCCTTATAAAGATGTACATGTTTTCCATAGGTATTCAGG  500

seq1  TATCTGAATTGTTCCCACCTATGAACATGTACAGAATCAAACAAGTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAATTGTTCCCACCTATGAACATGTACAGAATCAAACAAGTAAGT  550

seq1  ATGACAGATGTCTTAGTGTTTGTTGGGGAGAAAACTAAACTGGGAATTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATGTCTTAGTGTTTGTTGGGGAGAAAACTAAACTGGGAATTGC  600

seq1  AGGAACATATATGCTGTTTGAGGAACTAGCAGACTAGTTACATATAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATATATGCTGTTTGAGGAACTAGCAGACTAGTTACATATAAAAA  650

seq1  CAGCCGTGTGATATTCTATTCCCAAGGGTAGCGTATGAAGGTTCCAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGTGTGATATTCTATTCCCAAGGGTAGCGTATGAAGGTTCCAATTT  700

seq1  CTCCCTGTCCTTGACAACTGCTGTTTCATTATGGCCAGCAGAGTAGTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGTCCTTGACAACTGCTGTTTCATTATGGCCAGCAGAGTAGTGGT  750

seq1  TCTGACTGCAGATTGCATTTCTCTGGTTGTTAGAAAATGAGCACCTCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGCAGATTGCATTTCTCTGGTTGTTAGAAAATGAGCACCTCTAC  800

seq1  ACAGGCTTTTGGCTCAGAGGGTCACTTCAGAACATGGAGGAGGAAGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTTTTGGCTCAGAGGGTCACTTCAGAACATGGAGGAGGAAGAGGA  850

seq1  GGAGGAGGAGGAGG  864
      |||||||||||| |
seq2  GGAGGAGGAGGAAG  864

seq1: chr10_82212227_82213369
seq2: B6Ng01-249I23.g_67_1219 (reverse)

seq1  GCGTGACAGCAAACCAGAAGGCTCCCGTG-CCACGTGATTCCTAGTGGTC  49
      ||||||| || |||||| ||   ||||||  |||| |||| |||||||||
seq2  GCGTGACGGC-AACCAG-AGATCCCCGTGATCACGGGATT-CTAGTGGTC  47

seq1  ACTG--CTCCCCTGCTTGTCCACTCTCT-CCTGCAG-CATCTGC-ACAG-  93
        ||   ||||||||||||||| ||| | ||||||| ||||||| |||| 
seq2  CATGTCTTCCCCTGCTTGTCCATTCTTTACCTGCAGCCATCTGCAACAGA  97

seq1  AACCATGCCCACTGCTCAGTTCCCACGG-TCTAACAGGAACCCGACCTTT  142
      ||| ||||||| |||||||||||||||| ||||||||||  ||||| |||
seq2  AACAATGCCCATTGCTCAGTTCCCACGGTTCTAACAGGA--CCGACTTTT  145

seq1  TT--GTGAAGG-TAAAATGACT--ATCAATGGACTGAAAAGTCCCTC-TT  186
      ||   |||||| ||||||||||   ||||||||||| ||||| |||| ||
seq2  TTTGTTGAAGGTTAAAATGACTTATTCAATGGACTG-AAAGTTCCTCTTT  194

seq1  CGTGAAGGAGACTGTAACACTTGAAGAGAGGGACCATTTCCACAAAGGGA  236
      |||||||||||||||||||||||||||||||||||  || ||||||||||
seq2  CGTGAAGGAGACTGTAACACTTGAAGAGAGGGACCCATTTCACAAAGGGA  244

seq1  AATG-AATGCTAACAGGCGTGATAGTAACTGAAGCTGCCTGAACAGCCAC  285
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGCTAACAGGCGTGATAGTAACTGAAGCTGCCTGAACAGCCAC  294

seq1  AGACAGTGAAGGGCACCAAGTTTAATAGGCCAGACAAGACTTGCTTCTGC  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGAAGGGCACCAAGTTTAATAGGCCAGACAAGACTTGCTTCTGC  344

seq1  ATCCAACTTAA-TTTTCAATTAAAATTTTTTAAAAAACGAAGTTGCTTAT  384
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACTTAATTTTTCAATTAAAATTTTTTAAAAAACGAAGTTGCTTAT  394

seq1  GCTATGACTGTTTTACCAAAACAAAACAAAAAAAGTTTTCAATAAATAAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGACTGTTTTACCAAAACAAAACAAAAAAAGTTTTCAATAAATAAA  444

seq1  TGCTAAAACATCTAGCTAAGTTACCATGCAAGATAGTATATAGCCAAGAC  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAACATCTAGCTAAGTTACCATGCAAGATAGTATATAGCCAAGAC  494

seq1  AAACTCAAATTTATAATAAAGGCAACTTTCATTCAAAATGAACTCTACCC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAAATTTATAATAAAGGCAACTTTCATTCAAAATGAACTCTACCC  544

seq1  TTATATTTTATTAAAGGGTAAACATTATGAATTAACCCAGCTGCTTACTT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATTAAAGGGTAAACATTATGAATTAACCCAGCTGCTTACTT  594

seq1  GAATTACAAAATAACATGATTCAATATGAAAATAAGAAACTGTCTACAAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAAAATAACATGATTCAATATGAAAATAAGAAACTGTCTACAAA  644

seq1  TCTCTGACAGTAATAAATTGCAATATACAATGCATACAGGCGTCATACAG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACAGTAATAAATTGCAATATACAATGCATACAGGCGTCATACAG  694

seq1  AGCAACAAACTCTCGTACAAAACAAAAATATTTTAATACCTTTAAAATCC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAACTCTCGTACAAAACAAAAATATTTTAATACCTTTAAAATCC  744

seq1  AATTTTTTTTTCTTTTAAAATCATTCATGAAAAAGATTCTCAAGTCAGAA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTCTTTTAAAATCATTCATGAAAAAGATTCTCAAGTCAGAA  794

seq1  TTAACACCTCAATTAGTCAAGCATCAGGAAGCTACATTACAGCTACTTAT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACCTCAATTAGTCAAGCATCAGGAAGCTACATTACAGCTACTTAT  844

seq1  GGTACAAGGAGGCAGCTTCACCCTCACTTCCGCCCATGCCTCTGCTTCAG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAGGAGGCAGCTTCACCCTCACTTCCGCCCATGCCTCTGCTTCAG  894

seq1  ACTCCATCAGACTCTCTCCACACAAGCCCGGTTCCGTCCGTCCTTCCGAT  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATCAGACTCTCTCCACACAAGCCCGGTTCCGTCCGTCCTTCCGAT  944

seq1  CATGAAAACTGAATTTGCTGGACACCAGAAATCTAAGATTGGAAAATATA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAACTGAATTTGCTGGACACCAGAAATCTAAGATTGGAAAATATA  994

seq1  AATTAAGATTTTTTTTTTTATGTCAGACAACACCAAACAGGCCACAGCAG  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGATTTTTTTTTTTATGTCAGACAACACCAAACAGGCCACAGCAG  1044

seq1  GGAACTGCCCCCACCCCAGCCGGCCAGGCCACCCTGGTCAGAGCTACTTT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGCCCCCACCCCAGCCGGCCAGGCCACCCTGGTCAGAGCTACTTT  1094

seq1  AGTTCTCCTTACGCAGATGTAGCAAACACTTGTGAAATGTCTTAATCGGT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCTTACGCAGATGTAGCAAACACTTGTGAAATGTCTTAATCGGT  1144

seq1  AAGGAATTC  1143
      |||||||||
seq2  AAGGAATTC  1153