BAC Information

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BAC

Clone NameB6Ng01-250E08
Chromosome10 (Build37)
Map Location 97,595,174 - 97,596,330
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG667438, EG432494, Atp2b1, Wdr51b, Galnt4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250E08.bB6Ng01-250E08.g
ACCGA057861GA057862
length1,1511,216
definitionB6Ng01-250E08.b B6Ng01-250E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatcaggaaaaccgcatccaagaacttatcagtcacaccagac
taagggatgggtgcaactcccttgcctagacaccataaagtggcacccca
cactaaggtggcatggctccaccccaacatatcagctgataactgaggag
tgtatcaagggaaaatagaagagtccttggccaagactaccttactgcct
gcagatccacttgggttgaaaatactttgcatgcctttgttcctccttcc
agtgcagccacatcgttttcctttgttttctttccaccattaataaggct
cttatacttattaaagatagaggataggtgtctgaacctaagtcatcagt
gcccaggtctgtgtattataatctggtaaaactatctttgttgcctgccg
tctctactgcaaccatggcacagaccactttgtgtactggtctaacgact
tctaatgaggtcggttttgtcttgctgaacataagatgcctatgctccat
ggaagtcatggaggtctgggagttaggcttctattcacctgttgtctgtg
agaggttccaatctctcataccacagccgggggtggctgagaacaggaga
tagaaattggctatggagctgccttagttacctttctattgtcatatgac
agcatgaccaaggcaagttaatttgggcttatgattgtagaaggttagtg
ttcatcatgagagatcaaggagctgaaaatgtacatgtttacttttagtt
cttttattttttgagattattatataattatatcatttcccccttctcat
tcctccttccaagtccacagatatacccctccttgttctctctcaaatgt
ataacctttgttacatgcatatatgtgtatatgtacatacttgtaaatac
aacctgctcagtttgcacaacagtatatgtttgcatgttttcagtgatga
acacaaggtactggaatacttattgccaaattctttcctgggcaagacta
tttctcctactttcaccatccctagtgctgtagtgtttgtgcatggttca
gaagcttacatggtgattcctcaagtaggacacagaggggaaaggggagt
tggagaggaaacatctttgaaacttcgagtttaccctcagtgaccacctc
t

gaattctctgtttagccctgtacctcattttaattgtgttatttggcctt
ttggagtctaacttcttgagttctttctatatcttggatattagccatct
atcagatgtagtattagtgaagatcttttcccaatctgtaagttgccact
ttgtcctattgacagggcagtttttcttccagaagcttttcagtttcata
atgtcccttttattaatgtttgatcttacatccagagccattgacgttat
gatcataaaattcccgcctagcacatcaattctctgcagggctagatgca
tcttctcctactgaggccagaaaaatgcagtatagttaatgggaccggat
ccatgagtaggcaaaaatttagggatagtcctcattccaattgctgaggg
acccacatgaagaccgagctgcacatctgctatagatgtgcaggaggaaa
ggttcagcctgtgcatgcttttggttgctggttcagtctcttatagccct
cgagggtccaggttagttgactccattgttcttcctatgggattcctatc
ctgtgtcaatgtgtttgaagctatttcccactttctcttctattagattc
attgtatatggttttatgtggagttccatgatccacttggattttgagct
ttgtgcacggtgataaaatatggatcaattttcattctttgcatgcaaac
taccagttagaccagaaccatttgttgaagatgttttcttttttcattgc
atggtttgggcttccttgtaaaaggtcaaatgtctgtaggtataagggtc
tttctctaggtctagggtcctttctatatgtcctctgtacccatactttt
atgggtttgatcactattgatttgtgctacacttcgagggtcagggatag
tgattccttccagaaatttctttaattgcctggaaatggttttaacttat
cctgaagtttttttgggtttttttttcatatgaagttgaaaattttctcc
tttccctacttggtgaaaaatctgggtttgggttttaatggaattggcat
gtgaaacctattgaaactattttttggtaagatggctatttttaccaata
taatccaccctatcatggaccatggtaagtctttcgtgatttatgaaatt
cttctcatccttctccatgaactgaatttcctttcattcagaaaatttta
catctggttatacgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97595174_97596330
seq2: B6Ng01-250E08.b_43_1193 (reverse)

seq1  AGAGGTGTGTCACTGAGGGTAAACTTTGAAGTTTCAAAAGATTTGTTTCA  50
      ||||||| |||||||||||||||| | |||||||| |||||  |||||| 
seq2  AGAGGTG-GTCACTGAGGGTAAAC-TCGAAGTTTC-AAAGA--TGTTTC-  44

seq1  CTCT-CAACTCCCCTTCCCCCTCTGTGTCCTACTTGAGG-ATCACAATGT  98
      |||| ||||||||||| |||||||||||||||||||||| ||||| ||||
seq2  CTCTCCAACTCCCCTTTCCCCTCTGTGTCCTACTTGAGGAATCACCATGT  94

seq1  AAGCTTCTGAACCATGCACAAACAACTACAGGCAACTAGGGAATGGTGAA  148
      ||||||||||||||||||||||| |||||||   ||||||| ||||||||
seq2  AAGCTTCTGAACCATGCACAAAC-ACTACAG--CACTAGGG-ATGGTGAA  140

seq1  AGTAGGAGAAATAGTCTTGCCCAGGAAAGAATTTGGCAATTAGTTATCCA  198
      |||||||||||||||||||||||||||||||||||||||| |||  ||||
seq2  AGTAGGAGAAATAGTCTTGCCCAGGAAAGAATTTGGCAATAAGTATTCCA  190

seq1  GTACCTTGTGTTCATCACTGAAAACATGCAAACATATACTGTTGTGCAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTGTGTTCATCACTGAAAACATGCAAACATATACTGTTGTGCAAA  240

seq1  CTGAGCAGGTTGTATTTACAAGTATGTACATATACACATATATGCATGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGGTTGTATTTACAAGTATGTACATATACACATATATGCATGTA  290

seq1  ACAAAGGTTATACATTTGAGAGAGAACAAGGAGGGGTATATCTGTGGACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTTATACATTTGAGAGAGAACAAGGAGGGGTATATCTGTGGACT  340

seq1  TGGAAGGAGGAATGAGAAGGGGGAAATGATATAATTATATAATAATCTC-  397
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGAAGGAGGAATGAGAAGGGGGAAATGATATAATTATATAATAATCTCA  390

seq1  AAAAATAAAAGAACTAAAAGTAAACATGTACA-TTTCAGCTCCTTGATCT  446
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAAATAAAAGAACTAAAAGTAAACATGTACATTTTCAGCTCCTTGATCT  440

seq1  CTCATGATGAACACTAACCTTCTACAATCATAAGCCCAAATTAACTTGCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGATGAACACTAACCTTCTACAATCATAAGCCCAAATTAACTTGCC  490

seq1  TTGGTCATGCTGTCATATGACAATAGAAAGGTAACTAAGGCAGCTCCATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCATGCTGTCATATGACAATAGAAAGGTAACTAAGGCAGCTCCATA  540

seq1  GCCAATTTCTATCTCCTGTTCTCAGCCACCCCCGGCTGTGGTATGAGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTTCTATCTCCTGTTCTCAGCCACCCCCGGCTGTGGTATGAGAGA  590

seq1  TTGGAACCTCTCACAGACAACAGGTGAATAGAAGCCTAACTCCCAGACCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACCTCTCACAGACAACAGGTGAATAGAAGCCTAACTCCCAGACCT  640

seq1  CCATGACTTCCATGGAGCATAGGCATCTTATGTTCAGCAAGACAAAACCG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTTCCATGGAGCATAGGCATCTTATGTTCAGCAAGACAAAACCG  690

seq1  ACCTCATTAGAAGTCGTTAGACCAGTACACAAAGTGGTCTGTGCCATGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATTAGAAGTCGTTAGACCAGTACACAAAGTGGTCTGTGCCATGGT  740

seq1  TGCAGTAGAGACGGCAGGCAACAAAGATAGTTTTACCAGATTATAATACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGAGACGGCAGGCAACAAAGATAGTTTTACCAGATTATAATACA  790

seq1  CAGACCTGGGCACTGATGACTTAGGTTCAGACACCTATCCTCTATCTTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTGGGCACTGATGACTTAGGTTCAGACACCTATCCTCTATCTTTA  840

seq1  ATAAGTATAAGAGCCTTATTAATGGTGGAAAGAAAACAAAGGAAAACGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTATAAGAGCCTTATTAATGGTGGAAAGAAAACAAAGGAAAACGAT  890

seq1  GTGGCTGCACTGGAAGGAGGAACAAAGGCATGCAAAGTATTTTCAACCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGCACTGGAAGGAGGAACAAAGGCATGCAAAGTATTTTCAACCCA  940

seq1  AGTGGATCTGCAGGCAGTAAGGTAGTCTTGGCCAAGGACTCTTCTATTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCTGCAGGCAGTAAGGTAGTCTTGGCCAAGGACTCTTCTATTTT  990

seq1  CCCTTGATACACTCCTCAGTTATCAGCTGATATGTTGGGGTGGAGCCATG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGATACACTCCTCAGTTATCAGCTGATATGTTGGGGTGGAGCCATG  1040

seq1  CCACCTTAGTGTGGGGTGCCACTTTATGGTGTCTAGGCAAGGGAGTTGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTAGTGTGGGGTGCCACTTTATGGTGTCTAGGCAAGGGAGTTGCA  1090

seq1  CCCATCCCTTAGTCTGGTGTGACTGATAAGTTCTTGGATGCGGTTTTCCT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCTTAGTCTGGTGTGACTGATAAGTTCTTGGATGCGGTTTTCCT  1140

seq1  GATATGAATTC  1157
      |||||||||||
seq2  GATATGAATTC  1151


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