BAC Information

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BAC

Clone NameB6Ng01-250O14
Chromosome10 (Build37)
Map Location 58,712,741 - 58,921,256
singlet/doubletdoublet
Overlap geneLOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a
Upstream geneGcc2, Lims1, Ranbp2, 6230424H07Rik, LOC100038981, Edar, LOC624335, LOC100039099, Sh3md4, Sept10, Ankrd57
Downstream geneLOC100039225, Cbara1, EG664907, LOC664936, Dnajb12, Ddit4, D10Ertd641e, Ascc1, Spock2, Chst3, LOC100039080, Psap, Cdh23, 4632428N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250O14.bB6Ng01-250O14.g
ACCGA058323GA058324
length728747
definitionB6Ng01-250O14.b B6Ng01-250O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,920,531 - 58,921,256)(58,712,741 - 58,713,487)
sequence
gaattctttgaaccgccggtgattcatttcttcttcagggtttatctttt
caatgagaaatgagttgcctgggagtactggggtgacgtctgctacatct
tatctcaactactgtccagtgagttgggagcagtgggtcccaccaagtcg
caccaaagttctggactggatacgggagaaataccctctaaaatgtaacg
tccaaggaaattctgagttcccttgtgagcttggctcttaggctcacaaa
cgatcctgttgtcactgaagacttcaagagacctcacagaggtcttgtct
acatcagtggtgactctgataacattgactgaatctcaggaaaattgaaa
gcattaccctctgatcgccaggctacgaactggactggaacggattcctt
cgtaaattaacttttgtgatagttatgttgaaagatattttcaatagatg
gttaatgttctttgggctgtgtttcgatctgggaaaggactggtcagggc
ttggaatgtagctgagtttttattagagactcaaaacacattttaggttt
ttggaaacactgctgcccataatagaagatactgagtcaaagagtttaat
cttcttggtcattttcataactatgtcctttcacagcatgatactgaggc
caaaacagctattctctgcctttcactaaacaaggtttgagtagaaaagt
tggttggtgtgctgggggggtggggggg
gaattctgtgctgaatcggattggctcgggtcttttttggaactttttaa
tttgtaagggagagatttttaattacttctatttcacccattgttgtgaa
tccttttaaattgtttgcccaaacttgattgaattttgggaggtcatata
tatcactaaatttgtctatttctttcatgttttccagtttgatgaaataa
ccaaggaggaaaccggaattccttattgggcagacctggctcctacgaga
cctcaaagcccaccccaacaaagacgcatcccctccaagaaggccttacc
aactccgacaaggccacatttcctactatagtaacattcctgtgggccaa
gcattcaaacgcatattactataggtgccaaacctcttcaccccacctta
atgggccaggaggaaaggatgagagaggcatcgggaaagatatggtggcc
caggtgctgggttcttccatcagtgctgagagggagaatctcttcggaat
ggaggtaggtaggaggaacaacaagttgacctcccttttggattggtaaa
tcctcaattttagacgctgatcaacctacttgaacctcttctctatttct
aatttgactgtgaactgtgaaattttatcaatggaggacagacgattgta
tgtgctagcctatctttctacaacatggtgctgacatatgtgtatgtatg
tgtgttgtgtgtgtacatatatgtgtgtgtgtatatatatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58920531_58921256
seq2: B6Ng01-250O14.b_43_770 (reverse)

seq1  CCCCCCCACCCCCCCAGCACACCAACCAACTTTTCTACTC-AACCTTGTT  49
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCCCCCACCCCCCCAGCACACCAACCAACTTTTCTACTCAAACCTTGTT  50

seq1  TAGTG-AAGGCAGAGAATAGCTGTTTTGGCCTCAGTATCATGCTGTG-AA  97
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGTGAAAGGCAGAGAATAGCTGTTTTGGCCTCAGTATCATGCTGTGAAA  100

seq1  GGACATAGTTATGAAAATGACCAAGAAGATTAAACTCTTTGACTCAGTAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAGTTATGAAAATGACCAAGAAGATTAAACTCTTTGACTCAGTAT  150

seq1  CTTCTATTATGGGCAGCAGTGTTTCCAAAAACCTAAAATGTGTTTTGAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATTATGGGCAGCAGTGTTTCCAAAAACCTAAAATGTGTTTTGAGT  200

seq1  CTCTAATAAAAACTCAGCTACATTCCAAGCCCTGACCAGTCCTTTCCCAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATAAAAACTCAGCTACATTCCAAGCCCTGACCAGTCCTTTCCCAG  250

seq1  ATCGAAACACAGCCCAAAGAACATTAACCATCTATTGAAAATATCTTTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAAACACAGCCCAAAGAACATTAACCATCTATTGAAAATATCTTTCA  300

seq1  ACATAACTATCACAAAAGTTAATCAACGAAGGAATCTGTGTAAGGCCAGG  347
      |||||||||||||||||||||||  ||||||||||| ||   || |||| 
seq2  ACATAACTATCACAAAAGTTAATTTACGAAGGAATCCGTTCCAGTCCAGT  350

seq1  ACGTAGGCTGGAGAACAGAGGGTAAAGCATCGAATCTTCCAGAGCTTCAG  397
       ||||| |||| || |||||||||| || |  ||| |||| ||| |||||
seq2  TCGTAGCCTGGCGATCAGAGGGTAATGCTTTCAATTTTCCTGAGATTCAG  400

seq1  TCAATGCTTTCAGAGTCACCAGTGATGTAGACAAGACCTCTGTGAGGTCT  447
      |||||| | |||||||||||| ||||||||||||||||||||||||||||
seq2  TCAATGTTATCAGAGTCACCACTGATGTAGACAAGACCTCTGTGAGGTCT  450

seq1  CTTGAAGTCATCCGTGACAACAGGATCCTCCGTGAGGCAAAGCTGCAAGC  497
      ||||||||| || |||||||||||||| |  ||||| | |||   |||||
seq2  CTTGAAGTCTTCAGTGACAACAGGATCGTTTGTGAGCCTAAGAGCCAAGC  500

seq1  TCACATGGGAACACAGAATTTCCACGGACACTACATTCTAGACGGTATTT  547
      ||||| |||||| ||||||||||  ||||  |||||| |||| |||||||
seq2  TCACAAGGGAACTCAGAATTTCCTTGGACGTTACATTTTAGAGGGTATTT  550

seq1  CTCCTGTAACCTGTCCAGAACCTTGGTGTGACTTGGTGGGACCCACTGCT  597
      |||| ||| || ||||||||| |||||| |||||||||||||||||||||
seq2  CTCCCGTATCCAGTCCAGAACTTTGGTGCGACTTGGTGGGACCCACTGCT  600

seq1  CCCAACTCCCAGGCCAGGAGCTGAGCTAAGATGTAGCTGCTGTCACCCCA  647
      |||||||| | || ||| || |||| ||||||||||| |  |||||||||
seq2  CCCAACTCACTGGACAGTAGTTGAGATAAGATGTAGCAGACGTCACCCCA  650

seq1  GTACTCCCCTGCAACTCATTTCTCATTTGAAAAGATAAACCCTGAAGCTG  697
      ||||||||  ||||||||||||||| |||||||||||||||||||||  |
seq2  GTACTCCCAGGCAACTCATTTCTCA-TTGAAAAGATAAACCCTGAAGAAG  699

seq1  AAATGAATTACCTGTGGTTAAAAGAATTC  726
      |||||||| ||| | |||| |||||||||
seq2  AAATGAATCACCGGCGGTTCAAAGAATTC  728

seq1: chr10_58712741_58713487
seq2: B6Ng01-250O14.g_70_816

seq1  GAATTCTGTGCTGAATCCAACTGGCTCTGGCCTTTTTTGGAACTTTTTAA  50
      |||||||||||||||||  | |||||| || |||||||||||||||||||
seq2  GAATTCTGTGCTGAATCGGATTGGCTCGGGTCTTTTTTGGAACTTTTTAA  50

seq1  TTTG-AAGGGAGAGATTTTTAATTACTTCTATTTCACCAGGTGTTGTGAA  99
      |||| |||||||||||||||||||||||||||||||||   |||||||||
seq2  TTTGTAAGGGAGAGATTTTTAATTACTTCTATTTCACCCATTGTTGTGAA  100

seq1  TCCATTTAAATTGTTTGCCCAATCTTGATTTAATTTTGGTAGGTCATATA  149
      ||| |||||||||||||||||| ||||||| |||||||| ||||||||||
seq2  TCCTTTTAAATTGTTTGCCCAAACTTGATTGAATTTTGGGAGGTCATATA  150

seq1  TATCAAGAAATTTATCTATTTCTTTCAGGTTTTCCAGTTTGATGAAATAA  199
      |||||  |||||| ||||||||||||| ||||||||||||||||||||||
seq2  TATCACTAAATTTGTCTATTTCTTTCATGTTTTCCAGTTTGATGAAATAA  200

seq1  CCAAGGAGGAAACCGGAATTCCATATTGGGCAGACCTTCAGCCTAGGAGA  249
      |||||||||||||||||||||| ||||||||||||||    |||| ||||
seq2  CCAAGGAGGAAACCGGAATTCCTTATTGGGCAGACCTGGCTCCTACGAGA  250

seq1  CCTCAAAGCCCACCCCAACAGAGACACATCCCCTCCAAGAAGGCCATACC  299
      |||||||||||||||||||| |||| ||||||||||||||||||| ||||
seq2  CCTCAAAGCCCACCCCAACAAAGACGCATCCCCTCCAAGAAGGCCTTACC  300

seq1  TACTCCAACAAGGCCACATTTCCTAATATAGTAACATTCCTGTGGGCCAA  349
       ||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  AACTCCGACAAGGCCACATTTCCTACTATAGTAACATTCCTGTGGGCCAA  350

seq1  GCATTCAAGCACATAAGACTATAGGTGCCAAACCTCTTCAAACCACCATA  399
      |||||||| | ||||  |||||||||||||||||||||||  ||||| ||
seq2  GCATTCAAACGCATATTACTATAGGTGCCAAACCTCTTCACCCCACCTTA  400

seq1  ATGGGCCAGGAGGAAAGGCTGAGAGAGGCATCGGGAAAGATATGGTGGCC  449
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGGGCCAGGAGGAAAGGATGAGAGAGGCATCGGGAAAGATATGGTGGCC  450

seq1  CAGGTGCTGGGTTCTTCCATCAGTGCTGAGAGGTAGAATCTCTAGGGAAT  499
      ||||||||||||||||||||||||||||||||| |||||||||  |||||
seq2  CAGGTGCTGGGTTCTTCCATCAGTGCTGAGAGGGAGAATCTCTTCGGAAT  500

seq1  GGAGGTAGGTAGGAGGAAGAACAAGTTGTCCTCCATTTTGGTTTGGTAAA  549
      |||||||||||||||||| ||||||||| ||||| |||||| ||||||||
seq2  GGAGGTAGGTAGGAGGAACAACAAGTTGACCTCCCTTTTGGATTGGTAAA  550

seq1  TCCTTAATTTTTGCCAAGCACCAACCTACTTTTCACCTCTTCTCTATTTC  599
      |||| |||||| | |    | |||||||| ||  ||||||||||||||||
seq2  TCCTCAATTTTAGACGCTGATCAACCTAC-TTGAACCTCTTCTCTATTTC  599

seq1  TAATTCAAATGTTTAATGGGAAATTTTATCTAAAGAGGACAGAGGATTGC  649
      |||||  | |||  | || ||||||||||| |  ||||||||| ||||| 
seq2  TAATTTGACTGTGAACTGTGAAATTTTATCAATGGAGGACAGACGATTGT  649

seq1  ATGGGCTAGTTTATGTTTAGAGAACATGGTGCTGACATATGTGTATGTAT  699
      ||| |||||  ||| |||  | ||||||||||||||||||||||||||||
seq2  ATGTGCTAGCCTATCTTTCTACAACATGGTGCTGACATATGTGTATGTAT  699

seq1  GTGTGTTGTGTGTGTACATATATGTGTGTGTGTATATATATGTGTGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTGTGTGTGTACATATATGTGTGTGTGTATATATATGTGTGTG  747