BAC Information

Click to search

BAC

Clone NameB6Ng01-252B24
Chromosome10 (Build37)
Map Location 16,490,067 - 16,491,152
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671439, LOC382457, LOC546472
Downstream geneLOC100039576, LOC627511, Cited2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252B24.bB6Ng01-252B24.g
ACCGA059207GA059208
length1,1041,181
definitionB6Ng01-252B24.b B6Ng01-252B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttctttgatggaaaagtaaacacatgtactgatttagggcag
atattttagaaaaaaaaaaaaaaaagctgacaggcaagagggctattcca
ttttccagaatgaggttaagtgggagcctggtgctttattgtaggaagaa
tggggttatggtagactgagtgagtctcctgtctcccaagctttctttga
atatacgagcatgatgagcctttgaagccaaaaagaaatgactgattttg
cttcaaagtagtaagtcatggctgttagcatagataacaaaccattacag
aagtagtttgcgttttgttttttttcacagtatagctgatttttttcaac
atatatggatgagctaccattgtctattttaatcaaattccattcataaa
acaacatagtttcagggatgtggtgtatcttataaaattggaacagggtt
taatttgataatttcaaggggataatggataatttgagaacatacaagta
attgattatgatcaataaaatctgttttgtgtatagataaaatgacaagt
gaagaaaagagcaaataactgaagctggagacaactgtaagttgataggc
ttctttaatggtatttttctcttatgttccctataactttaactttgtca
ttcacagcttgatgcaatcaaacctctagtgttattttaaggcccttcat
tcctaatacttgatgattggcctttttattgttattatggagtctgaggc
tagggagggcagagactgatattttaggagaaatggatgctgtcaggagg
gaatccagcatttcccctatgaagcaaacttgatacttgaacaatttgct
accccaagaggcatatcattatgactcatatagcatagaaaaaagattat
tgggctattaaatatatattctttaaccaccatgtgtatttatagaaaac
cttactattgaaagccagagaagaatgacttgttagataaaggaaactat
ggttctaagccaaagacattcgcttggattcccaaggattaacattggta
agaagagaagaatctaactttggaatgtgtccttgcttcgtttttctttt
tttt
gaattctatatgggacatttttaaatcaatcaatcaatcaattaattaat
taattttttccactccatattttatccccctccatccaccctccgactgt
tgcacatcccatacctcctccctaacccccaccccacctggcctctaaaa
tccctggggactccagtctcttgagggttaggtgtatctcctctgaatga
acacagatgtggaagtcctctactgtatatatgttgggggcctcgttcca
gctggtgtatgctgcctgtttggtggtccagtgtttgagagatcttgggc
tccagattaattggattttctacaggatcgccattctcctcagcttcttt
cagccttccctaactcaacaataggggtcacctgcttctgtccattggtt
gggtgcaaatatctgcatctgactctttcagctgcttgttgagccttcca
gagtgaggtcatgctaggtccctttttgtgaggattccatagcctcagta
atagtgtcagatttttggacccccccccccaccttgcactggatatcact
ttgggcctgtctctggaccttcttttcctcagactcctctccatttccat
ccctgcagttctttcagacagaaacaattatgggtcagagttgggactgt
aggatggtaacccaatccctcacttgatatctttcttcctgctggaggtg
ggctctattaagctctcactccttacagttgggcatttcatctaaggtcc
ctccctttgagtcctgagtggctcttacctctcaagtctctggtgcattc
tagagggttccctcaacctcccatctcttgaggttgcctgtttctactct
tttgctggacttggcttcagtccttttctctcacccaataccagatcaga
ttcccctctccctcctccttctcccccacatccttccctccctcccactt
gtgattcctttcttcttcgcctaagtcgactgagatgtcctcactggcat
atcaccttgtgacctttttgagttctgtggaactgtaccttggtattctg
gggtttgttgtttgcttttggttttggttttggctaacattcaactatta
cgaatatataccatgcaagtcctggtctgagctaactcggtcaggagatg
aatactttctagtatcccactccactatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16490067_16491152
seq2: B6Ng01-252B24.b_46_1149

seq1  GAATTCACTTCTTTGATGGAAAAGTAAACACATGTACTGATTTAGGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTTGATGGAAAAGTAAACACATGTACTGATTTAGGGCAG  50

seq1  ATATTTTAGAAAAAAAAAAAAAAAAGCTGACAGGCAAGAGGGCTATTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAGAAAAAAAAAAAAAAAAGCTGACAGGCAAGAGGGCTATTCCA  100

seq1  TTTTCCAGAATGAGGTTAAGTGGGAGCCTGGTGCTTTATTGTAGGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGAATGAGGTTAAGTGGGAGCCTGGTGCTTTATTGTAGGAAGAA  150

seq1  TGGGGTTATGGTAGACTGAGTGAGTCTCCTGTCTCCCAAGCTTTCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTATGGTAGACTGAGTGAGTCTCCTGTCTCCCAAGCTTTCTTTGA  200

seq1  ATATACGAGCATGATGAGCCTTTGAAGCCAAAAAGAAATGACTGATTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACGAGCATGATGAGCCTTTGAAGCCAAAAAGAAATGACTGATTTTG  250

seq1  CTTCAAAGTAGTAAGTCATGGCTGTTAGCATAGATAACAAACCATTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGTAGTAAGTCATGGCTGTTAGCATAGATAACAAACCATTACAG  300

seq1  AAGTAGTTTGCGTTTTGTTTTTTTTCACAGTATAGCTGATTTTTTTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTTTGCGTTTTGTTTTTTTTCACAGTATAGCTGATTTTTTTCAAC  350

seq1  ATATATGGATGAGCTACCATTGTCTATTTTAATCAAATTCCATTCATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGATGAGCTACCATTGTCTATTTTAATCAAATTCCATTCATAAA  400

seq1  ACAACATAGTTTCAGGGATGTGGTGTATCTTATAAAATTGGAACAGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATAGTTTCAGGGATGTGGTGTATCTTATAAAATTGGAACAGGGTT  450

seq1  TAATTTGATAATTTCAAGGGGATAATGGATAATTTGAGAACATACAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGATAATTTCAAGGGGATAATGGATAATTTGAGAACATACAAGTA  500

seq1  ATTGATTATGATCAATAAAATCTGTTTTGTGTATAGATAAAATGACAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATGATCAATAAAATCTGTTTTGTGTATAGATAAAATGACAAGT  550

seq1  GAAGAAAAGAGCAAATAACTGAAGCTGGAGACAACTGTAAGTTGATAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAGAGCAAATAACTGAAGCTGGAGACAACTGTAAGTTGATAGGC  600

seq1  TTCTTTAATGGTATTTTTCTCTTATGTTCCCTATAACTTTAACTTTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAATGGTATTTTTCTCTTATGTTCCCTATAACTTTAACTTTGTCA  650

seq1  TTCACAGCTTGATGCAATCAAACCTCTAGTGTTATTTTAAGGCCCTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTTGATGCAATCAAACCTCTAGTGTTATTTTAAGGCCCTTCAT  700

seq1  TCCTAATACTTGATGATTGGCCTTTTTATTGTTATTATGGAGTCTGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATACTTGATGATTGGCCTTTTTATTGTTATTATGGAGTCTGAGGC  750

seq1  TAGGGAGGGCAGAGACTGATATTTTAGGAGAAATGGATGCTGTCAGGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGGGCAGAGACTGATATTTTAGGAGAAATGGATGCTGTCAGGAGG  800

seq1  GAATCCAGCATTTCCCCTATGAAGCAAACTTGATACTTGAACAA-TTGCT  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAATCCAGCATTTCCCCTATGAAGCAAACTTGATACTTGAACAATTTGCT  850

seq1  A-CCCAAGAGGCATATCATTATGACTCATATAGCATAG-AAAAAGATTAT  897
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACCCCAAGAGGCATATCATTATGACTCATATAGCATAGAAAAAAGATTAT  900

seq1  T-GGCTATTAAATATATATTCTTAAACCACCATGTGTATTTATAG-AAAC  945
      | ||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  TGGGCTATTAAATATATATTCTTTAACCACCATGTGTATTTATAGAAAAC  950

seq1  CTTACTA-TGAAGGCCAGAGA--GATGACTTGGTAGATAAAGG-AACTAT  991
      ||||||| |||| ||||||||   |||||||| |||||||||| ||||||
seq2  CTTACTATTGAAAGCCAGAGAAGAATGACTTGTTAGATAAAGGAAACTAT  1000

seq1  -GTTCTAAGCCAAAGACATTCGC-TGGATTCCC-AGGATTAACA-TGGT-  1036
       |||||||||||||||||||||| ||||||||| |||||||||| |||| 
seq2  GGTTCTAAGCCAAAGACATTCGCTTGGATTCCCAAGGATTAACATTGGTA  1050

seq1  AGAAGGAGAGAATC-AACTTTTGAATGTTGTC----CTTTGGTTTTCTTT  1081
      |||||   |||||| |||||| ||||| ||||    ||| | ||||||||
seq2  AGAAGAGAAGAATCTAACTTTGGAATG-TGTCCTTGCTTCGTTTTTCTTT  1099

seq1  TTTTT  1086
      |||||
seq2  TTTTT  1104