BAC Information

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BAC

Clone NameB6Ng01-252E10
Chromosome6 (Build37)10 (Build37)
Map Location 74,554,000 - 74,555,15616,105,878 - 16,106,010
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252E10.bB6Ng01-252E10.g
ACCGA059315GA059316
length1,147355
definitionB6Ng01-252E10.b B6Ng01-252E10.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(74,554,000 - 74,555,156)(16,105,878 - 16,106,010)
sequence
gaattccaatacttacagattttaaatacatgttgagtgacaaagaccaa
cctacatcattaatatttgatatttgatccatttatatgttgaggacacg
tcataaaactttatttcacatttttgactctgaactgagaatcaggaatt
tccaggtacataattttctgttctgtgtccccatctggtatttaaattct
ctgaagtaataattcttcatctgtgtatctatacactggaattatgaaat
tttgcgtaacttgacagttgtgttatctcagattcagaaagaaaaatatc
atctgtggtggtttaaatgagtttggctcccatagactcatgtgtttgaa
tgcctggcccagaggggatagcactatttggtcttggaggaaccatgtca
ctgttgaagtgagttttgaggtctcctatgcttaagctctgtccagtgtg
aatgatagtctccttctggctgcctgaagaagactgtctccttctggcta
tcttcagatcaagacatagagcactcagctctttctccagcttcatgtca
gcttgtaggctgttatgctcctggccatgatcataatggattgaaactct
gaattgtaaggcagccccaattaaatgttttcttttataagaattgtctt
ggtcatggtgtctctatctagtcataaaaccctaagacaacatctgaatt
ttcacaaggatccctaattattttaaccaaaaggtaaattattgaatgta
cattgtttattatgttaatgctgtaacttcatctgtgcaaataatttttc
taaattatcgtttctcaaatgtaaatgtgagaatttagcatgttactaat
gctatcatctctcaaatgtaaacctagttatcttcttgaataacacaaac
atgaatgttgttccataggagtatgttccaactcttaggggggcagtcta
gcgtgcgttcaggcatttacagaagaagtggctccctgtttttctcctag
caatgcttttcctctctagcaaggaactttgctacacagttctagtgaag
tctgtttgcagctttcaacagtgcacagctattatatctcttattctcag
gcactctgcttagatcattagccagccttttattctttcagttattt

cgtggtaaatgtagttttagttttagagaactctacacactgatttccac
agtggccagaccagtcattattccttctaaagtatggtccttgttgcctt
tcttctctcctgaatttgcttctagatgttgaattgttcattaccattct
gaacaagataagatgaaatctcaaatttcattggtttgtgtctactgatt
actggaaacaataacgatatatatatatatatatatatatatatatatat
atatatatatgtgtgtgtgtgtgtatatatatatatatatatatatatat
aaagcaaaaaaatattagtatgtatttttttttttgtttgtgtgtgtgtt
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74554000_74555156
seq2: B6Ng01-252E10.b_46_1192

seq1  GAATTCCAATACTTACAGATTTTAAATACATGTTGAGTGACAAAGACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATACTTACAGATTTTAAATACATGTTGAGTGACAAAGACCAA  50

seq1  CCTACATCATTAATATTTGATATTTGATCCATTTATATGTTGAGGACACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCATTAATATTTGATATTTGATCCATTTATATGTTGAGGACACG  100

seq1  TCATAAAACTTTATTTCACATTTTTGACTCTGAACTGAGAATCAGGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAACTTTATTTCACATTTTTGACTCTGAACTGAGAATCAGGAATT  150

seq1  TCCAGGTACATAATTTTCTGTTCTGTGTCCCCATCTGGTATTTAAATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTACATAATTTTCTGTTCTGTGTCCCCATCTGGTATTTAAATTCT  200

seq1  CTGAAGTAATAATTCTTCATCTGTGTATCTATACACTGGAATTATGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTAATAATTCTTCATCTGTGTATCTATACACTGGAATTATGAAAT  250

seq1  TTTGCGTAACTTGACAGTTGTGTTATCTCAGATTCAGAAAGAAAAATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGTAACTTGACAGTTGTGTTATCTCAGATTCAGAAAGAAAAATATC  300

seq1  ATCTGTGGTGGTTTAAATGAGTTTGGCTCCCATAGACTCATGTGTTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGGTGGTTTAAATGAGTTTGGCTCCCATAGACTCATGTGTTTGAA  350

seq1  TGCCTGGCCCAGAGGGGATAGCACTATTTGGTCTTGGAGGAACCATGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCCCAGAGGGGATAGCACTATTTGGTCTTGGAGGAACCATGTCA  400

seq1  CTGTTGAAGTGAGTTTTGAGGTCTCCTATGCTTAAGCTCTGTCCAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAAGTGAGTTTTGAGGTCTCCTATGCTTAAGCTCTGTCCAGTGTG  450

seq1  AATGATAGTCTCCTTCTGGCTGCCTGAAGAAGACTGTCTCCTTCTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAGTCTCCTTCTGGCTGCCTGAAGAAGACTGTCTCCTTCTGGCTA  500

seq1  TCTTCAGATCAAGACATAGAGCACTCAGCTCTTTCTCCAGCTTCATGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGATCAAGACATAGAGCACTCAGCTCTTTCTCCAGCTTCATGTCA  550

seq1  GCTTGTAGGCTGTTATGCTCCTGGCCATGATCATAATGGATTGAAACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAGGCTGTTATGCTCCTGGCCATGATCATAATGGATTGAAACTCT  600

seq1  GAATTGTAAGGCAGCCCCAATTAAATGTTTTCTTTTATAAGAATTGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTAAGGCAGCCCCAATTAAATGTTTTCTTTTATAAGAATTGTCTT  650

seq1  GGTCATGGTGTCTCTATCTAGTCATAAAACCCTAAGACAACATCTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGTGTCTCTATCTAGTCATAAAACCCTAAGACAACATCTGAATT  700

seq1  TTCACAAGGATCCCTAATTATTTTAACCAAAAGGTAAATTATTGAATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGGATCCCTAATTATTTTAACCAAAAGGTAAATTATTGAATGTA  750

seq1  CATTGTTTATTATGTTAATGCTGTAACTTCATCTGTGCAAATAATTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTATTATGTTAATGCTGTAACTTCATCTGTGCAAATAATTTTTC  800

seq1  TAAATTATCGTTTCTCAAATGTAAATGTGAGAATTTAGCATGTTACTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATCGTTTCTCAAATGTAAATGTGAGAATTTAGCATGTTACTAAT  850

seq1  GCTATCATCTCTCAAATGTAAACCTAGTTATCTTCTTGAATAACACAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCATCTCTCAAATGTAAACCTAGTTATCTTCTTGAATAACACAAAC  900

seq1  ATGAATGTTGTTCCATAGGAGTATGTTCCAACTCTTA-GGGGGCAGTCTA  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGAATGTTGTTCCATAGGAGTATGTTCCAACTCTTAGGGGGGCAGTCTA  950

seq1  GCGTGCGTTCAGGCATTTACAGAAGAAGTGGCTCCCTGTTTTCTCCCTAG  999
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  GCGTGCGTTCAGGCATTTACAGAAGAAGTGGCTCCCTGTTTTTCTCCTAG  1000

seq1  CAATGCTTTT-CTCTCTAGCAAAGGAACTTTGCTTACACAGTTCTAGTTG  1048
      |||||||||| ||||||||| |||||||||||| ||||||||||||| ||
seq2  CAATGCTTTTCCTCTCTAGC-AAGGAACTTTGC-TACACAGTTCTAG-TG  1047

seq1  AAGTCTGTTTGCAGGGTTTTCAACAGTTGCACAGCTTAATTATATCTCTT  1098
      |||||||||||||  | ||||||||| |||||||||  ||||||||||||
seq2  AAGTCTGTTTGCA--GCTTTCAACAG-TGCACAGCT--ATTATATCTCTT  1092

seq1  A-TCTCCAGCACTTCCTGCCTTAGATTCCATTAGCCCAAGCTTTTA-TCT  1146
      | ||||  |||||  ||| |||||||  |||||| |||  |||||| |||
seq2  ATTCTCAGGCACT--CTG-CTTAGAT--CATTAG-CCAGCCTTTTATTCT  1136

seq1  TTCAGTTATTT  1157
      |||||||||||
seq2  TTCAGTTATTT  1147


seq1: chr10_16105878_16106010
seq2: B6Ng01-252E10.g_308_428

seq1  ATATACATATATATATAGATGTAGGTATATATGATGTGTGTATTTATATG  50
      ||||| |||||||||||        ||||||| |||||||        ||
seq2  ATATATATATATATATA--------TATATAT-ATGTGTG--------TG  33

seq1  TGAGTGTATATATATATATATATATATATATAT-----ATATATATATAT  95
      || ||||||||||||||||||||||||||||||     | | | ||||  
seq2  TGTGTGTATATATATATATATATATATATATATAAAGCAAAAAAATATTA  83

seq1  ATATACACACATATATGTGTTTGTGTGTGTGTGTGTGT  133
       |||  |    | | | ||||||||||||||| |||||
seq2  GTATGTATTTTTTTTTTTGTTTGTGTGTGTGTTTGTGT  121


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