BAC Information

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BAC

Clone NameB6Ng01-252I03
Chromosome10 (Build37)
Map Location 100,064,907 - 100,066,024
singlet/doubletsinglet
Overlap gene1700017N19Rik
Upstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252I03.bB6Ng01-252I03.g
ACCGA059484GA059485
length1,110894
definitionB6Ng01-252I03.b B6Ng01-252I03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactcctccaagtttcttttcctgtattttattgattattttact
tatttacatttcaaatatggtaccccttttcggtttctcctcctcaaccc
cccatcccatcctctctccccctgactctctatgagggtgctcctctacc
tacacacccactcctgccttcccgccctagcatccccctatgttgctgca
tcgaacctccataggatcaaaggcctctccagccattgatgtcagacagg
gccatcctctgctacatatgtagctggagccatgggtccctccatgtgta
cacttttcttggttgtttagtccctggaagctctggggtgggggtctggt
tagttgatattgttgtccttcctgtggggttgcaatccccttcacctcct
tcagtccttccactaattcttccattggggtccctgtgctcagtgctatg
gttagctgccagcatctgcctctgtattggtcaggttctggcagagttct
aatgatccagagagtagcttggaatttataaagccctaccatctacttca
tccctgatattccttagagaagtatggacaagattaggacccatgtgtgc
tgtgtcctggtccttcctttcctccccatatcatcatagcacagataaac
ttcagataaacccttgaaaaaacaaatttactttgtctctgccctggaat
gcatctttctgtgggtacccattgccacaacttctgggtttaggaatgcc
cacaaatcttcatcgttccttttgccaggcataagcccactctcttctac
ccacatgctccactacacctgtgttttcaacctctcatttcttgacacag
agcataaaatacaccatttctcttcagtgattcttttaactactaaacat
agaagcatcttgaaataagagtttgcacactttttttttttacttcaaac
attagataaagacaatccacccatgaaaacaatactggggatttttcttt
ttggtttataatgctcatattatttggaattagggcatttatttttaaaa
aatatttattcttatagatgcttctagttatgacaagaccctgaagaact
ggagagaaaa
gaattctttgttgagctctgagccccatttttaatggggttatttgattt
ggtacagcaacagacaagtagaccaatggaatagaactgaagacccagaa
atgaacccacacacctacggtcacttgatcttcgacaagggagctaaaac
catccagtggaaaaaagacagcattttcaacaaatgatgctggcacaact
ggcgattatcatgtagaagaatgcgaattgatctgttcctatctccttgt
actaaggtcaaatctaagtggatcaaggaattccacataaaagcagagac
agttaaacttatagaggagaaagtggggaaaatcctcgaagatatgggca
caagggaaaaattcgtgaatagaacagcaatgtcttgtgctgtaagatcg
agaattgattaatgggacctcataaaattgcaaagcttctgtaaggcaaa
agacactgtcaataagacaaaaaggccaccaacagattgggaaaggatct
ttacctatcctaaatcagataggggactaatatctaatatgtataaagaa
ctttagttttcttaagtttactgggtttcatgttgaaccttagcttgcat
ttttccttggcttgcctaccaatatcttctaagatatgcctgtctctatt
ccccaatacgaggattcaagcaagcttgctcactcctggttgttgttggt
gttgatgatgatgatgatgatgtttttttgagaagtctgaggatccagac
ttagtagctcactgatgtgcagaaagcattctttacaccatcagccatct
ccctaagtacctaggatattttaaattaggccatactacattaataaaag
ggtcaattctttcgtttgtcaactttaaccagaatttaataatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100064907_100066024
seq2: B6Ng01-252I03.b_43_1152

seq1  GAATTCACTCCTCCAAGTTTCTTTTCCTGTATTTTATTGATTATTTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCTCCAAGTTTCTTTTCCTGTATTTTATTGATTATTTTACT  50

seq1  TATTTACATTTCAAATATGGTACCCCTTTTCGGTTTCTCCTCCTCAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACATTTCAAATATGGTACCCCTTTTCGGTTTCTCCTCCTCAACCC  100

seq1  CCCATCCCATCCTCTCTCCCCCTGACTCTCTATGAGGGTGCTCCTCTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCATCCTCTCTCCCCCTGACTCTCTATGAGGGTGCTCCTCTACC  150

seq1  TACACACCCACTCCTGCCTTCCCGCCCTAGCATCCCCCTATGTTGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCCACTCCTGCCTTCCCGCCCTAGCATCCCCCTATGTTGCTGCA  200

seq1  TCGAACCTCCATAGGATCAAAGGCCTCTCCAGCCATTGATGTCAGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAACCTCCATAGGATCAAAGGCCTCTCCAGCCATTGATGTCAGACAGG  250

seq1  GCCATCCTCTGCTACATATGTAGCTGGAGCCATGGGTCCCTCCATGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTCTGCTACATATGTAGCTGGAGCCATGGGTCCCTCCATGTGTA  300

seq1  CACTTTTCTTGGTTGTTTAGTCCCTGGAAGCTCTGGGGTGGGGGTCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTTGGTTGTTTAGTCCCTGGAAGCTCTGGGGTGGGGGTCTGGT  350

seq1  TAGTTGATATTGTTGTCCTTCCTGTGGGGTTGCAATCCCCTTCACCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGATATTGTTGTCCTTCCTGTGGGGTTGCAATCCCCTTCACCTCCT  400

seq1  TCAGTCCTTCCACTAATTCTTCCATTGGGGTCCCTGTGCTCAGTGCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTTCCACTAATTCTTCCATTGGGGTCCCTGTGCTCAGTGCTATG  450

seq1  GTTAGCTGCCAGCATCTGCCTCTGTATTGGTCAGGTTCTGGCAGAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTGCCAGCATCTGCCTCTGTATTGGTCAGGTTCTGGCAGAGTTCT  500

seq1  AATGATCCAGAGAGTAGCTTGGAATTTATAAAGCCCTACCATCTACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCCAGAGAGTAGCTTGGAATTTATAAAGCCCTACCATCTACTTCA  550

seq1  TCCCTGATATTCCTTAGAGAAGTATGGACAAGATTAGGACCCATGTGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGATATTCCTTAGAGAAGTATGGACAAGATTAGGACCCATGTGTGC  600

seq1  TGTGTCCTGGTCCTTCCTTTCCTCCCCATATCATCATAGCACAGATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCTGGTCCTTCCTTTCCTCCCCATATCATCATAGCACAGATAAAC  650

seq1  TTCAGATAAACCCTTGAAAAAACAAATTTACTTTGTCTCTGCCCTGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATAAACCCTTGAAAAAACAAATTTACTTTGTCTCTGCCCTGGAAT  700

seq1  GCATCTTTCTGTGGGTACCCATTGCCACAACTTCTGGGTTTAGGAATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTTCTGTGGGTACCCATTGCCACAACTTCTGGGTTTAGGAATGCC  750

seq1  CACAAATCTTCATCGTTCCTTTTGCCAGGCATAAGCCCACTCTCTTCTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCTTCATCGTTCCTTTTGCCAGGCATAAGCCCACTCTCTTCTAC  800

seq1  CCACATGCTCCACTACACCTGTGTTTTCAACCTCTCATTTCTTGACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCTCCACTACACCTGTGTTTTCAACCTCTCATTTCTTGACACAG  850

seq1  AGCATAAAATACACCATTTCTCTTCAGTGATTCTTTTAACTACTAAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAATACACCATTTCTCTTCAGTGATTCTTTTAACTACTAAACAT  900

seq1  AGAAGCATCTTGAAATAAGAGTTTGCACACTTTTTTTTTTTACTTCAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATCTTGAAATAAGAGTTTGCACACTTTTTTTTTTTACTTCAAAC  950

seq1  ATTAGATAAAGAACAATCCACCCATGAAAACAATACTGGGGATTTTTCTT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATAAAG-ACAATCCACCCATGAAAACAATACTGGGGATTTTTCTT  999

seq1  TCTGGTTTATAAATGCTCATATTATTTGGAATTAGGGCAATTTAATTTTT  1050
      | |||||||| ||||||||||||||||||||||||||||  || ||||||
seq2  TTTGGTTTAT-AATGCTCATATTATTTGGAATTAGGGCA--TTTATTTTT  1046

seq1  AAAAAATATATA-TCTTATAGATGCTTCTAGTTTATGGACAAAGACCCCT  1099
      ||||||||| || |||||||||||||||||| |||| ||| |||| ||||
seq2  AAAAAATATTTATTCTTATAGATGCTTCTAG-TTAT-GAC-AAGA-CCCT  1092

seq1  GAAGAAATTGAAGAGAAAA  1118
      |||| || || ||||||||
seq2  GAAG-AACTGGAGAGAAAA  1110