BAC Information

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BAC

Clone NameB6Ng01-253F05
Chromosome10 (Build37)
Map Location 81,180,568 - 81,181,469
singlet/doubletsinglet
Overlap genenone
Upstream geneAp3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711
Downstream geneLOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253F05.bB6Ng01-253F05.g
ACCGA060092GA060093
length1,194905
definitionB6Ng01-253F05.b B6Ng01-253F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatagtgacccactttaaaaaagtttatatacagtttctgggaat
tgggaagttattaaaaatgaagtgtgagatggcttaatgtgtgggaccag
aaggttaaataggaaagttacgaccttatgtggctgatatacccatacat
ttatggtgaatggatcttttacaacatttgggtacttagtataatattcc
tgcattttcagagagcacccctgatgaaattaggggtgaaatggtagatg
ttcttggggaaggcattgacacacacacacacacacacacacacacacac
acacacacacacatatatatatatatatatatctatctcagtcatgaaaa
ccaaccccgggccgtgtcagttgtccaaacacatcatcacagggatggag
tttccaaatttgtaaacaaagccactgctgaaattatatcaatggcccta
cccttaaagtggttggctgacaaggctgtgtgagtagatcagtgaccctt
aactaaagagtacgttacaggcagtagagtagctggtacaagagcagctg
gagatgtgcttgctttggcagtacatatactaaagagcagctgcaggctc
aacagagtctaccagcccatggagtcctctgtgtttgttataaaagagaa
atcaggaaaatggaggatgttaacatatttaagagcagtgaatagactaa
ttcaaccaatggattcgttacagcctagaattcctttaccttctttatta
cctaagccatggcctatgatactaattaatttaaaagagtgcaagagcaa
gatagggaaaggtttgctttaatagggcctacttacaataatagtggtcc
agtaaaaaggtgtcagtggaaagttcttccatgaggaattattccaactt
catgtcaatattttgtgctacaactgttagaaatatttgtaagcaatttt
ctttaattcatcatttatcattacatggaattttttggggggctaaattc
tgatgcagaatacttagatgaaatatttaaggaagcgtaaagaattcttg
caatgcattggttatggaatgttttctgaaaaatacgagaaggagatcct
aatggactattttctgtaatggaaataaagaaaatttcaaccaaagtaca
aatccggaagaatcagtgcaactcgtatggattttcacaaaaat
gaattccataggccattgcaggaaaggtgactactaacagacaatacaga
gagacactcaaactgctcacagagtatgctttagcaaaattgtataaaaa
ttactaacttcaaaaaagatgaagaagatggatgtggtgatgtaattaac
ctttaatcccagacctcaggaggcaaagaggagtgaatctctaatttcta
ggccatcttagtctatgtagtgatttccatgacactcagtgctacttcat
gagaccctcaaaacaaacgacaacaaaaagaatgagaaagaaagcacgca
ggggctcaatcaaaattcctgcaaagagttaaaatgtacttcagctcaat
aatagcctaagttataagggaaatttaatatccctacaaaagaaaacatt
tttagtaagtgattaagagatcaagagttttcaaaaatattggcaaataa
atattgatccaaaatcaacaccaaaaatcataaggaagaaagatgggtca
gcagttaggagcacatgttgcttttgcagaagacctggatcaaatcctaa
cactcgcttgaaagttcccagccattcataactccagatcaagagaatcc
aatgttctcctctcacttcaggaaacatcaggcacacaagcagtatacat
ctatatacatgtatatgtgaacatatgtatgtgatacacaaatacatata
tatatatgcatatatactacacatatgcacaaaagattcatgcacttttt
tttaagatttatttattattatacataagtacactgtagctgacttcaaa
cataccagaaaaggatggtcagatctcatagccggtggttgtgagcacca
tatgattggtgggatttgaactccggaccttttggacgagatgtccagtg
ctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81180568_81181469
seq2: B6Ng01-253F05.g_64_968 (reverse)

seq1  AAGAGCACT-GACTGCTCTTCC-AAAGGTCCGGAGTTCAAATCCCACCAA  48
      ||||||||| |||  ||| ||| |||||||||||||||||||||||||||
seq2  AAGAGCACTGGACATCTCGTCCAAAAGGTCCGGAGTTCAAATCCCACCAA  50

seq1  TCATATGGTGGCTCACAACCACC-GCTATGAGATCTGACCATCCTTTTCT  97
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  TCATATGGT-GCTCACAACCACCGGCTATGAGATCTGACCATCCTTTTCT  99

seq1  GGTATGTTTGAAGTCAGCTACAGTGTACTTATGTATAATAATAAATAAAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTTGAAGTCAGCTACAGTGTACTTATGTATAATAATAAATAAAT  149

seq1  CTT-AAAAAAAGTGCATGAATCTTTTGTGCATATGTGTAGTATATATGCA  196
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAAAAGTGCATGAATCTTTTGTGCATATGTGTAGTATATATGCA  199

seq1  TATATATATATGTATTTGTGTATCACATACATATGTTCACATATACATGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATGTATTTGTGTATCACATACATATGTTCACATATACATGT  249

seq1  ATATAGATGTATACTGCTTGTGTGCCTGATGTTTCCTGAAGTGAGAGGAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGATGTATACTGCTTGTGTGCCTGATGTTTCCTGAAGTGAGAGGAG  299

seq1  AACATTGGATTCTCTTGATCTGGAGTTATGAATGGCTGGGAACTTTCAAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGGATTCTCTTGATCTGGAGTTATGAATGGCTGGGAACTTTCAAG  349

seq1  CGAGTGTTAGGATTTGATCCAGGTCTTCTGCAAAAGCAACATGTGCTCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGTTAGGATTTGATCCAGGTCTTCTGCAAAAGCAACATGTGCTCCT  399

seq1  AACTGCTGACCCATCTTTCTTCCTTATGATTTTTGGTGTTGATTTTGGAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGACCCATCTTTCTTCCTTATGATTTTTGGTGTTGATTTTGGAT  449

seq1  CAATATTTATTTGCCAATATTTTTGAAAACTCTTGATCTCTTAATCACTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTATTTGCCAATATTTTTGAAAACTCTTGATCTCTTAATCACTT  499

seq1  ACTAAAAATGTTTTCTTTTGTAGGGATATTAAATTTCCCTTATAACTTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATGTTTTCTTTTGTAGGGATATTAAATTTCCCTTATAACTTAG  549

seq1  GCTATTATTGAGCTGAAGTACATTTTAACTCTTTGCAGGAATTTTGATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATTGAGCTGAAGTACATTTTAACTCTTTGCAGGAATTTTGATTG  599

seq1  AGCCCCTGCGTGCTTTCTTTCTCATTCTTTTTGTTGTCGTTTGTTTTGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGCGTGCTTTCTTTCTCATTCTTTTTGTTGTCGTTTGTTTTGAG  649

seq1  GGTCTCATGAAGTAGCACTGAGTGTCATGGAAATCACTACATAGACTAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATGAAGTAGCACTGAGTGTCATGGAAATCACTACATAGACTAAG  699

seq1  ATGGCCTAGAAATTAGAGATTCACTCCTCTTTGCCTCCTGAGGTCTGGGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAGAAATTAGAGATTCACTCCTCTTTGCCTCCTGAGGTCTGGGA  749

seq1  TTAAAGGTTAATTACATCACCACATCCATCTTCTTCATCTTTTTTGAAGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTTAATTACATCACCACATCCATCTTCTTCATCTTTTTTGAAGT  799

seq1  TAGTAATTTTTATACAATTTTGCTAAAGCATACTCTGTGAGCAGTTTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTTTATACAATTTTGCTAAAGCATACTCTGTGAGCAGTTTGAG  849

seq1  TGTCTCTCTGTATTGTCTGTTAGTAGTCACCTTTCCTGCAATGGCCTATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTGTATTGTCTGTTAGTAGTCACCTTTCCTGCAATGGCCTATG  899

seq1  GAATTC  902
      ||||||
seq2  GAATTC  905