BAC Information

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BAC

Clone NameB6Ng01-253P02
Chromosome10 (Build37)
Map Location 82,342,668 - 82,438,474
singlet/doubletdoublet
Overlap geneTxnrd1, EG216185
Upstream gene1700123A16Rik, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Eid3
Downstream geneChst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253P02.bB6Ng01-253P02.g
ACCGA060539GA060540
length1,0581,114
definitionB6Ng01-253P02.b B6Ng01-253P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,437,420 - 82,438,474)(82,342,668 - 82,343,772)
sequence
gaattctcaagcttgtgacatactactttgaccctgtctgtggctttctt
tgtgtttgcctttccttatattctgactcttaaaaagacccctgttgctg
gatttagggtctactcagataatcctgggtaatggagatctataacatac
ccgctgaacaagtcacatctacagttcccagggttacagtgtggacatct
tctcagtggccgcccttgagatcactacagacaggaaatcaaaacagttt
tcacagaataagtgatctgtcatgtgggtgctgggaattgaacctgggtc
ctttggaagaacaaccattgctcttaaccactgagctatctcttcggggc
ccctcaaaaggccttcttaatggcctctatcattagggttggtgagggaa
tgcctctggcccctcaaaatgatatttcccagaaatactgctgagttgac
tgacaggtatctggaacaaaaatcttattctgtgagtttagatctcaaat
attcaagatgttaagtactctttatgataatgactaatctgctctctgaa
aataaaattaagaccgctgatcagccacagaagagcagtgaatgctaatt
aggaacagcaggatatgagttcccaaagccgcagacccagctgggagtga
tactgctcagagagaggttctggagagctcgccttatatacctcagagta
aggacagagcatgaggctcagatttcattccatctggcaccagcccagag
caaatcactccccttcacggggtcagtacctgcctgagatgaaccccaag
aaagcaacatgctgatagacaaaggttggttaagcctgtgtaaggatctg
atatggtgacctcttagcaggaacactatgcagggggaagggactcactc
tttctgcctagattaattgctaagtcaatgctatgtagatagaaggtgcg
gttttacaacaagcttatgctcagagttgttgaatttttaaccaagccat
catgaaatcatcctgttgttgacagatttcaaccgcacagcttattgtta
gccaagag
gaattccttgccaccattgtccttggggattgaaagaaagagaggcaggg
actgacactgtcttaaaggttacaagctataagccttggtggcagagtga
gcacatgaccctggcagcatgatgtagttggagtgacatttctctgtgca
cttgatgtgtatttgtaaaccaggtggctattttgtaacataaatgtggt
ctcctgtaggcgagtttattttgtgcagagcaaggaccatgttctttgtt
agtactaggggagtggaaacaaagggttaactgacgtggctgtgcatcga
gacttctgaggccttggtccactgcatgacagtaccctgtagaagaacct
tctaaaacatgtcaagaaaaaagatgtttctcatcaaaggataacactac
caatactgttttaatgatgacgtcattaaaatagattgacagtttcttct
attttggatgtttttttgcctgggaatttctggattccttcttctaggag
tcatactcatctggtgcttctgtccctactacctgggatgtgtggtcttg
cttagggtctttgggtgttgtaacacagtgactaactcggggcctgccca
cagttctggaggttcagtcatgagcttgcactggccatgactgaatcccc
agctcataggtggcatcttcctttagtggaaagtgcggtggcatgtctgt
ggagttctttcatagactctggtcctgtctgtgagagccagatttttttt
tatgccctaatcatctactaaaaacctattaacaccatcacacttggggt
agagtactatggggaattttaatatttgggcacacaaacattcagaccct
accaaggtcccatcctgatttttattttcttagaaataagggtttgccaa
tgttgcctagatgaacttgaatcccaggggctcaagtgatccctgcctca
gcatcactcttcaagatgctgtcctcagcatcacttctcaggatcctgag
aagctgagtccacagcatcttgccaactattgcccaacactattactttg
gttggtgataagcctggaagggccatgcacaggcccagtgagcttatagc
ctcagttcacagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82437420_82438474
seq2: B6Ng01-253P02.b_49_1106 (reverse)

seq1  CTCTTGGCTAACA--TAGCTGTGCGGTTTGAAATCTGTCA--CACAGGAT  46
      |||||||||||||   |||||||||| |||||||||||||   |||||||
seq2  CTCTTGGCTAACAATAAGCTGTGCGG-TTGAAATCTGTCAACAACAGGAT  49

seq1  GATTTCATGATTGGCTTGGTT-AAAATTCAAC-ACTCTGAGCATAAGCTT  94
      |||||||||| |||||||||| |||||||||| |||||||||||||||||
seq2  GATTTCATGA-TGGCTTGGTTAAAAATTCAACAACTCTGAGCATAAGCTT  98

seq1  GTTGTAAAACCGCACCTTCTTATCTACATAGCATTGACTTAGCAATTAAA  144
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  GTTGTAAAACCGCACCTTC-TATCTACATAGCATTGACTTAGCAATT-AA  146

seq1  TCTAGGCAGAAAGAGTGAGTCCCTT-CCCCTGCATAGTGTTCCTGCTAAG  193
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTAGGCAGAAAGAGTGAGTCCCTTCCCCCTGCATAGTGTTCCTGCTAAG  196

seq1  AGGTCACCATATCAGATCCTTACACAGGCTTAACCAACCTTTGTCTATCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACCATATCAGATCCTTACACAGGCTTAACCAACCTTTGTCTATCA  246

seq1  GCATGTTGCTTTCTTGGGGTTCATCTCAGGCAGGTACTGACCCCGTGAAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTGCTTTCTTGGGGTTCATCTCAGGCAGGTACTGACCCCGTGAAG  296

seq1  GGGAGTGATTTGCTCTGGGCTGGTGCCAGATGGAATGAAATCTGAGCCTC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGATTTGCTCTGGGCTGGTGCCAGATGGAATGAAATCTGAGCCTC  346

seq1  ATGCTCTGTCCTTACTCTGAGGTATATAAGGCGAGCTCTCCAGAACCTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTGTCCTTACTCTGAGGTATATAAGGCGAGCTCTCCAGAACCTCT  396

seq1  CTCTGAGCAGTATCACTCCCAGCTGGGTCTGCGGCTTTGGGAACTCATAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCAGTATCACTCCCAGCTGGGTCTGCGGCTTTGGGAACTCATAT  446

seq1  CCTGCTGTTCCTAATTAGCATTCACTGCTCTTCTGTGGCTGATCAGCGGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGTTCCTAATTAGCATTCACTGCTCTTCTGTGGCTGATCAGCGGT  496

seq1  CTTAATTTTATTTTCAGAGAGCAGATTAGTCATTATCATAAAGAGTACTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTTTATTTTCAGAGAGCAGATTAGTCATTATCATAAAGAGTACTT  546

seq1  AACATCTTGAATATTTGAGATCTAAACTCACAGAATAAGATTTTTGTTCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTGAATATTTGAGATCTAAACTCACAGAATAAGATTTTTGTTCC  596

seq1  AGATACCTGTCAGTCAACTCAGCAGTATTTCTGGGAAATATCATTTTGAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTGTCAGTCAACTCAGCAGTATTTCTGGGAAATATCATTTTGAG  646

seq1  GGGCCAGAGGCATTCCCTCACCAACCCTAATGATAGAGGCCATTAAGAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGAGGCATTCCCTCACCAACCCTAATGATAGAGGCCATTAAGAAG  696

seq1  GCCTTTTGAGGGGCCCCGAAGAGATAGCTCAGTGGTTAAGAGCAATGGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGAGGGGCCCCGAAGAGATAGCTCAGTGGTTAAGAGCAATGGTT  746

seq1  GTTCTTCCAAAGGACCCAGGTTCAATTCCCAGCACCCACATGACAGATCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCCAAAGGACCCAGGTTCAATTCCCAGCACCCACATGACAGATCA  796

seq1  CTTATTCTGTGAAAACTGTTTTGATTTCCTGTCTGTAGTGATCTCAAGGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTGTGAAAACTGTTTTGATTTCCTGTCTGTAGTGATCTCAAGGG  846

seq1  CGGCCACTGAGAAGATGTCCACACTGTAACCCTGGGAACTGTAGATGTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCACTGAGAAGATGTCCACACTGTAACCCTGGGAACTGTAGATGTGA  896

seq1  CTTGTTCAGCGGGTATGTTATAGATCTCCATTACCCAGGATTATCTGAGT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCAGCGGGTATGTTATAGATCTCCATTACCCAGGATTATCTGAGT  946

seq1  AGACCCTAAATCCAGCAACAGGGGTCTTTTTAAGAGTCAGAATATAAGGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTAAATCCAGCAACAGGGGTCTTTTTAAGAGTCAGAATATAAGGA  996

seq1  AAGGCAAACACAAAGAAAGCCACAGACAGGGTCAAAGTAGTATGTCACAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAACACAAAGAAAGCCACAGACAGGGTCAAAGTAGTATGTCACAA  1046

seq1  GCTTGAGAATTC  1055
      ||||||||||||
seq2  GCTTGAGAATTC  1058

seq1: chr10_82342668_82343772
seq2: B6Ng01-253P02.g_68_1181

seq1  GAATTCCTTGCCACCATTGTCCTTGGGGATTGAAAGAAAGAGAGGCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCCACCATTGTCCTTGGGGATTGAAAGAAAGAGAGGCAGGG  50

seq1  ACTGACACTGTCTTAAAGGTTACAAGCTATAAGCCTTGGTGGCAGAGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACACTGTCTTAAAGGTTACAAGCTATAAGCCTTGGTGGCAGAGTGA  100

seq1  GCACATGACCCTGGCAGCATGATGTAGTTGGAGTGACATTTCTCTGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGACCCTGGCAGCATGATGTAGTTGGAGTGACATTTCTCTGTGCA  150

seq1  CTTGATGTGTATTTGTAAACCAGGTGGCTATTTTGTAACATAAATGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTGTATTTGTAAACCAGGTGGCTATTTTGTAACATAAATGTGGT  200

seq1  CTCCTGTAGGCGAGTTTATTTTGTGCAGAGCAAGGACCATGTTCTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTAGGCGAGTTTATTTTGTGCAGAGCAAGGACCATGTTCTTTGTT  250

seq1  AGTACTAGGGGAGTGGAAACAAAGGGTTAACTGACGTGGCTGTGCATCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTAGGGGAGTGGAAACAAAGGGTTAACTGACGTGGCTGTGCATCGA  300

seq1  GACTTCTGAGGCCTTGGTCCACTGCATGACAGTACCCTGTAGAAGAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGAGGCCTTGGTCCACTGCATGACAGTACCCTGTAGAAGAACCT  350

seq1  TCTAAAACATGTCAAGAAAAAAGATGTTTCTCATCAAAGGATAACACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACATGTCAAGAAAAAAGATGTTTCTCATCAAAGGATAACACTAC  400

seq1  CAATACTGTTTTAATGATGACGTCATTAAAATAGATTGACAGTTTCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTGTTTTAATGATGACGTCATTAAAATAGATTGACAGTTTCTTCT  450

seq1  ATTTTGGATGTTTTTTTGCCTGGGAATTTCTGGATTCCTTCTTCTAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGATGTTTTTTTGCCTGGGAATTTCTGGATTCCTTCTTCTAGGAG  500

seq1  TCATACTCATCTGGTGCTTCTGTCCCTACTACCTGGGATGTGTGGTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTCATCTGGTGCTTCTGTCCCTACTACCTGGGATGTGTGGTCTTG  550

seq1  CTTAGGGTCTTTGGGTGTTGTAACACAGTGACTAACTCGGGGCCTGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGTCTTTGGGTGTTGTAACACAGTGACTAACTCGGGGCCTGCCCA  600

seq1  CAGTTCTGGAGGTTCAGTCATGAGCTTGCACTGGCCATGACTGAATCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGGAGGTTCAGTCATGAGCTTGCACTGGCCATGACTGAATCCCC  650

seq1  AGCTCATAGGTGGCATCTTCCTTTAGTGGAAAGTGCGGTGGCATGTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATAGGTGGCATCTTCCTTTAGTGGAAAGTGCGGTGGCATGTCTGT  700

seq1  GGAGTTCTTTCATAGACTCTGGTCCTGTCTGTGAGAGCCAGATTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCTTTCATAGACTCTGGTCCTGTCTGTGAGAGCCAGATTTTTTTT  750

seq1  TATGCCCTAATCATCTACTAAAAACCTATTAACACCATCACACTTGGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCTAATCATCTACTAAAAACCTATTAACACCATCACACTTGGGGT  800

seq1  AGAGTACTATGGGGAATTTTAATATTTGGGCACACAAACATTCAGACCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACTATGGGGAATTTTAATATTTGGGCACACAAACATTCAGACCCT  850

seq1  ACCAAGGTCCCATCCTGATTTTTATTTTCTTAGAAAT-AGGGTTTGCCAA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCAAGGTCCCATCCTGATTTTTATTTTCTTAGAAATAAGGGTTTGCCAA  900

seq1  TGTTGCCTAGATGAACTTGAATCCCA-GGGCTCAAGTGAT-CCTGCCTCA  947
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGTTGCCTAGATGAACTTGAATCCCAGGGGCTCAAGTGATCCCTGCCTCA  950

seq1  GCATCACTTCTCAGGATGCTG-CCTCAGCATCACTTCTCAGGATCCTGAG  996
      ||||||||  ||| ||||||| ||||||||||||||||||||||||||||
seq2  GCATCACTCTTCAAGATGCTGTCCTCAGCATCACTTCTCAGGATCCTGAG  1000

seq1  AAGCTGAGTCCACAAGCATC-TGCC-ACTA-TGCCCAACACTTATTACTT  1043
      ||||||||||||| |||||| |||| |||| |||||||||| ||||||||
seq2  AAGCTGAGTCCAC-AGCATCTTGCCAACTATTGCCCAACAC-TATTACTT  1048

seq1  TGG-TGGTGAT-AGGCTGG-AGGGCAATGCACAGCCCAGGTGAGCTT-CA  1089
      ||| ||||||| || |||| ||||| |||||||| ||  ||||||||  |
seq2  TGGTTGGTGATAAGCCTGGAAGGGCCATGCACAGGCCCAGTGAGCTTATA  1098

seq1  CGCTCAGTTCACAGCT  1105
        ||||||||||||||
seq2  GCCTCAGTTCACAGCT  1114