BAC Information

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BAC

Clone NameB6Ng01-254P09
Chromosome10 (Build37)
Map Location 51,668,616 - 51,669,201
singlet/doubletsinglet
Overlap genenone
Upstream geneSim1, LOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik
Downstream geneVgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254P09.bB6Ng01-254P09.g
ACCGA061288GA061289
length910704
definitionB6Ng01-254P09.b B6Ng01-254P09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaccagtgctttacatagtcaactacgtctaaatcacatatt
cccttgaatttaggatcctgcggcatatggtatgtgcgttgtgggtccca
ctgtctgctctgacacagggctgggcagctcgaggaggcaggacgtggga
agttttgaccttgcttacctcaccacgctgtcgctgggcaggtgttaggc
catagggcagccctgggacatggctctgagagtgggaaagcatagtctga
catgcaggactgtctgagctggctctgggcatcctggtgggagttcagag
agcccttctacccgagattagatggaggctctataggccaaggtggctct
gtaggtgaaggcctgttccattgctccccatggcagatcctggtgaaaag
aggcagtccatagttttaaagaattaaaacaattaaaaccgtacttcact
tttcagggaggagtgtttgggttggggagttattggctaagcttccaggc
ctttaggtacctcattaaaatggagatctgtcttgagcctatgtgaccac
aggtcaagtcctctacttgtggaggggcttggggcgttgcccttatgtga
ctgatgaccacaaatctatggaggactgcagctagtgacaggggcctggt
gcccaggaacaggtgaaacacttaccatctccttaaggtttcccagtctt
tacttactcaactgggaaccaggctaccttttcatggtcccacaatggta
ggctggcccatgtcttgaatgctggggttgcagatgtgcaccaccataaa
ctagcttcaaatccttgaaggagctttgcactttgccagcttactttata
ggtagagtcaaacaatgtgcaggctttgcagatgtgtgtttacatttaat
tgtaaacatg
cgcggaattccccattctactctccctcatcctccctctccccctgcccc
cctttttcctccctccacctgcccaacttgaaaccagtcccatggacaag
caccaatttctaacactattaataatactcttttatgcttgcagaaagga
gcatgttgtcctctgagaggctttacccagcaactaactcagacagatac
aggcacccacagtcaaacagtggatgaagcttggaggctcttatggaaga
atagaaggaaggatttctggccccctgaaggataggagttccacaggaag
acagagtcaattaatcttgtcccatggatttctgagagtctgaaccacca
gacaaagaacatacatgggctggacctaggtctcccctcgcatatgtagc
agatgggcagtttgaccttcgtgtgggtcctgaacaactggagaggggct
atcccaaaaactgttgcctgtatataggatatggacttctagctgggctg
ccttgtctggcctcagtaggagaagcatctagcctcacagaaacttaaac
tggtggcagggggtgggggtcgtagccagggggccctacccactaagagg
agaaagggggatgaagaaggattgtgggaaggggtgaccaggagagtggt
agtgagcaggatgtaaagtgaaataagtaaaaaataaataaataaaaaaa
tgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_51668616_51669201
seq2: B6Ng01-254P09.b_47_632 (reverse)

seq1  CGCCCCAAGCCCCTCCACAAGTAGAGGACTTGACCTGTGGTCACATAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCAAGCCCCTCCACAAGTAGAGGACTTGACCTGTGGTCACATAGGC  50

seq1  TCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGCCTGGAAGCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGCCTGGAAGCTTAG  100

seq1  CCAATAACTCCCCAACCCAAACACTCCTCCCTGAAAAGTGAAGTACGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAACTCCCCAACCCAAACACTCCTCCCTGAAAAGTGAAGTACGGTT  150

seq1  TTAATTGTTTTAATTCTTTAAAACTATGGACTGCCTCTTTTCACCAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTTTTAATTCTTTAAAACTATGGACTGCCTCTTTTCACCAGGAT  200

seq1  CTGCCATGGGGAGCAATGGAACAGGCCTTCACCTACAGAGCCACCTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGGGGAGCAATGGAACAGGCCTTCACCTACAGAGCCACCTTGGC  250

seq1  CTATAGAGCCTCCATCTAATCTCGGGTAGAAGGGCTCTCTGAACTCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGCCTCCATCTAATCTCGGGTAGAAGGGCTCTCTGAACTCCCAC  300

seq1  CAGGATGCCCAGAGCCAGCTCAGACAGTCCTGCATGTCAGACTATGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCCCAGAGCCAGCTCAGACAGTCCTGCATGTCAGACTATGCTTT  350

seq1  CCCACTCTCAGAGCCATGTCCCAGGGCTGCCCTATGGCCTAACACCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTCAGAGCCATGTCCCAGGGCTGCCCTATGGCCTAACACCTGCC  400

seq1  CAGCGACAGCGTGGTGAGGTAAGCAAGGTCAAAACTTCCCACGTCCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGACAGCGTGGTGAGGTAAGCAAGGTCAAAACTTCCCACGTCCTGCC  450

seq1  TCCTCGAGCTGCCCAGCCCTGTGTCAGAGCAGACAGTGGGACCCACAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGAGCTGCCCAGCCCTGTGTCAGAGCAGACAGTGGGACCCACAACG  500

seq1  CACATACCATATGCCGCAGGATCCTAAATTCAAGGGAATATGTGATTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACCATATGCCGCAGGATCCTAAATTCAAGGGAATATGTGATTTAG  550

seq1  ACGTAGTTGACTATGTAAAGCACTGGTGAAGAATTC  586
      ||||||||||||||||||||||||||||||||||||
seq2  ACGTAGTTGACTATGTAAAGCACTGGTGAAGAATTC  586