BAC Information

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BAC

Clone NameB6Ng01-255C07
Chromosome10 (Build37)
Map Location 13,203,997 - 13,205,069
singlet/doubletsinglet
Overlap genenone
Upstream geneUtrn, LOC665172, Stx11, Sf3b5, Plagl1, 4930519B02Rik, Ltv1, LOC666829, Phactr2, LOC100039475
Downstream geneFuca2, Pex3, Deadc1, Aig1, EG666859, Hivep2, Gpr126
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255C07.bB6Ng01-255C07.g
ACCGA061423GA061424
length1,2161,073
definitionB6Ng01-255C07.b B6Ng01-255C07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaatatttgagggaagatccagtctggagacatatatttagaag
ttacctaaagacacataggctgttacatcggttggcattatatgttggtt
ccgtggagatcaaacgtgcattacattttctgaggagcagaccctgggct
tggcagcagaccctaagagcagcaaatgaaaggcccagtgcaccaaaggc
cagcagagtagcaggaacaggtatgcagagtatatgtagcattcatagtt
gaattgcatgccagtttgtataatggaggaaagcgtttcacagtaagtca
ggtcacaattttgtagtaggtttgtaaaactaattgactatttgataaca
ttaggttgagggtctgtggcatatttcctatgtggacaccacttggtagc
tgcccaacacgtcctactgccagcgatttacgaactaccagaacaagtca
tatcaaactccacagtcgcattccaacaattaaatttccattggtctcta
ccagtgcttctgcttataaaaaaaaaatatttttgccaatgtttcatata
tcctgaccagtttccccttcccccacttctctctctccctcttctctccc
ctcttccctctcccctacatccattcctcctctgtttcccttcagaaaag
aacaggctttccagaggtatcagccagagcataacaagctataatgagac
aagacgtaggccctcttaccaaggctgcatgagacaatccagtaggagaa
aaggggtcccaaaagccagcccctgttcccactgttagtcccacatgaac
acaaccaacttctgtattggtcagggttctgtagagtcacagaacttatg
ggtagtctctgtatagtaagggaatttgttgatgacttacagtctgaagt
ccaactcccaacaatgggcagcagcagctgtgaatggaagtccaaggttc
tagcagtttctcagttccacaggcagcaaggtgagaagagagagagtaat
cttcttcttcaatgtccttattgtagatctccagcagatgtgtagcccag
atgaaaggtggtggccagctcactttaatccagatgatcttgaactagag
gatctcctgtcttattcttctggaaattcatagccatgctcagatttcat
tgcagaatcagtcgaactcattccgacattccgattgatcacgtgagccc
tccaatttcttggaat
gaattcatgggccccttctggtctctttccctcttcttataaagctatta
aaatcaaatcataggagctcttcccgagtaactatacccaaccctagtgt
ctgcccagtggccccatctgcaaacactaccttcagatgaagttgccacc
tcctcagttcctaacaatggggattagattggaaacatgatgctccaggc
agaagcacataaatcttgtgcaagccatagcaacagaccagcaaggcagc
ctccgcgcgtcactactcagaggcaaataactagtatgatctgctcggaa
acatatagaaggtgattgacttagccggactggtcagagaaggcctgtct
aaagagagaagctacgaagagactagaatcacaaagccttgaacatacca
ggagcacagaggtaagagtccatgccaggctgaaggagcaaaagcttgct
gtaaggagccaaggaggagagccagtagggctggggtgtcatgagagagt
cctgagctacaggtgacagagatgtcagtgagcatacaccctctagttta
agatgaagtggacgggggatttgaggcaggagagtgacataggccaggcc
acattttaagtaattaatctagtgttggagagatgactcttgatgccatt
ccagaagtttgaatcaccagtatacggtggcccataactgtatgtaaact
ccacttccaggggttccaacatgctcttctagcctccaagggcatcagct
atacaaatggtatgtaatcaaaacatacatgtaaaaattttatatgcata
tataaaaattgctttagattcttattgagtattttctttatttacatttc
aaatgttgtcccctttcccagtccccttccaatactccctccccttaccc
ctgcttctatgaaggtgttctcactcctaccctcctgccctggcattttc
ccctacattggggtaagggcctcttcctcccactgatgcccaacaagtca
ttctctgctacatatgcgtcggagccatggtctcttggttggaggattta
gttcctgggaaccctgcaaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_13203997_13205069
seq2: B6Ng01-255C07.g_69_1141

seq1  GAATTCATGGGCCCCTTCTGGTCTCTTTCCCTCTTCTTATAAAGCTATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGCCCCTTCTGGTCTCTTTCCCTCTTCTTATAAAGCTATTA  50

seq1  AAATCAAATCATAGGAGCTCTTCCCGAGTAACTATACCCAACCCTAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAATCATAGGAGCTCTTCCCGAGTAACTATACCCAACCCTAGTGT  100

seq1  CTGCCCAGTGGCCCCATCTGCAAACACTACCTTCAGATGAAGTTGCCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAGTGGCCCCATCTGCAAACACTACCTTCAGATGAAGTTGCCACC  150

seq1  TCCTCAGTTCCTAACAATGGGGATTAGATTGGAAACATGATGCTCCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGTTCCTAACAATGGGGATTAGATTGGAAACATGATGCTCCAGGC  200

seq1  AGAAGCACATAAATCTTGTGCAAGCCATAGCAACAGACCAGCAAGGCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCACATAAATCTTGTGCAAGCCATAGCAACAGACCAGCAAGGCAGC  250

seq1  CTCCGCGCGTCACTACTCAGAGGCAAATAACTAGTATGATCTGCTCGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCGCGTCACTACTCAGAGGCAAATAACTAGTATGATCTGCTCGGAA  300

seq1  ACATATAGAAGGTGATTGACTTAGCCGGACTGGTCAGAGAAGGCCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGAAGGTGATTGACTTAGCCGGACTGGTCAGAGAAGGCCTGTCT  350

seq1  AAAGAGAGAAGCTACGAAGAGACTAGAATCACAAAGCCTTGAACATACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAAGCTACGAAGAGACTAGAATCACAAAGCCTTGAACATACCA  400

seq1  GGAGCACAGAGGTAAGAGTCCATGCCAGGCTGAAGGAGCAAAAGCTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACAGAGGTAAGAGTCCATGCCAGGCTGAAGGAGCAAAAGCTTGCT  450

seq1  GTAAGGAGCCAAGGAGGAGAGCCAGTAGGGCTGGGGTGTCATGAGAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAGCCAAGGAGGAGAGCCAGTAGGGCTGGGGTGTCATGAGAGAGT  500

seq1  CCTGAGCTACAGGTGACAGAGATGTCAGTGAGCATACACCCTCTAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCTACAGGTGACAGAGATGTCAGTGAGCATACACCCTCTAGTTTA  550

seq1  AGATGAAGTGGACGGGGGATTTGAGGCAGGAGAGTGACATAGGCCAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGTGGACGGGGGATTTGAGGCAGGAGAGTGACATAGGCCAGGCC  600

seq1  ACATTTTAAGTAATTAATCTAGTGTTGGAGAGATGACTCTTGATGCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAGTAATTAATCTAGTGTTGGAGAGATGACTCTTGATGCCATT  650

seq1  CCAGAAGTTTGAATCACCAGTATACGGTGGCCCATAACTGTATGT-AACT  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCAGAAGTTTGAATCACCAGTATACGGTGGCCCATAACTGTATGTAAACT  700

seq1  CCACTTCCAGGGGTTCCAACATGCTCTTCTAGCCTCCAAGGGCATCAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCCAGGGGTTCCAACATGCTCTTCTAGCCTCCAAGGGCATCAGCT  750

seq1  ATACAAATGGTATGTAATCAAAACATACATGTAAAAATTTTATATGCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATGGTATGTAATCAAAACATACATGTAAAAATTTTATATGCATA  800

seq1  TATAAAAATTGCTTTAGATTCTTATTGAGTATTTTCTTTATTTACATTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATTGCTTTAGATTCTTATTGAGTATTTTCTTTATTTACATTTC  850

seq1  AAATGTTGTCCCCTTTCCCAGTCCCCTTCCAATACTCCCTCCCCTTACCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGTCCCCTTTCCCAGTCCCCTTCCAATACTCCCTCCCCTTACCC  900

seq1  CTGCTTCTATGAGGGTGTTCTCACTCCTACCCTCCTGCCCTGGCA-TTTC  948
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  CTGCTTCTATGAAGGTGTTCTCACTCCTACCCTCCTGCCCTGGCATTTTC  950

seq1  CCCTACATTGGGGTAAGGGCCTC-TCCTCCCACTGATGCCCAACAAGGTC  997
      ||||||||||||||||||||||| |||||||||||||||||||||| |||
seq2  CCCTACATTGGGGTAAGGGCCTCTTCCTCCCACTGATGCCCAACAA-GTC  999

seq1  ATCCTCTGCTACATATGCGGTCGGAGCCATGGGTCTCTTTGGTTGGTGG-  1046
      || ||||||||||||||| ||||||||||| |||||| |||||||| || 
seq2  ATTCTCTGCTACATATGC-GTCGGAGCCAT-GGTCTC-TTGGTTGGAGGA  1046

seq1  TTTAGTTCCTGGGAACCCTGCAGGGTA  1073
      |||||||||||||||||||||| ||||
seq2  TTTAGTTCCTGGGAACCCTGCAAGGTA  1073