BAC Information

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BAC

Clone NameB6Ng01-255D10
Chromosome10 (Build37)
Map Location 127,157,913 - 127,332,285
singlet/doubletdoublet
Overlap geneMyo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7
Upstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440
Downstream geneSdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255D10.bB6Ng01-255D10.g
ACCGA061477GA061478
length1,1341,142
definitionB6Ng01-255D10.b B6Ng01-255D10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,157,913 - 127,159,042)(127,331,123 - 127,332,285)
sequence
gaattcttacccaaatgcagcatcctcccagcttcagcccgtctgcccat
taataaatcgtttccttctttccttgctcagatacatatgcgtatttatt
tcttccattccttgacttttacagagttgtactcggaccctccaccccca
ttgcccatgccatgcgtcccttatgctcccgggagccagataatacagac
aataaggaaaagaaggagaattgtctctggcctccttgaccggctgagct
ctggctgagtttagagatactggggtgggggtgcagaagtctgggatagg
gctcaggtcgcaggtggccaacaagctgattcattaaatgtgtccctgga
gggaccacccaaggatgcctttcttggagacgaggcttctaagagataaa
gcctgaaaagaagcctaaggcttgcaggttgcaggctgaggcaagctggg
atacgcagggacagcgctcccaggatcttcatcagcctcagccccagaga
tgggcgacagcactcccagaaaccctctcctctccatgccccacagctgg
gacccacagctggcagcccctgacaggggtagaccctcgattcagacgtg
cgcatctctaggaccgactccatccctcttgtcttctgttatttcttccg
tgtcgttatcactcatggaccatgtcatgcagcctcaccgtccctgcttg
tgtgggcttttgacagtgttagtatgtaatattttgtagaaagctattgc
tctatatcttttcccactgtcctttttttctctttcctcgtagtctgtcc
tgtctcaccaccctgttctctcttcggggaacacgatgcacacaacagta
aaatgtagatctgtaccctgggagaggcaggaaagggctgctgttgttcc
tgtctctggaagtctcctcctctcctcctccccaccctccctgcctcctc
cactaagctctgagctctatgagttctgaggctgggggcccttgcagctt
caatcggtaaggcagctcacgggccaagttattcacgcttggtgggggaa
gacctgattactatccttcttgcctgcagattaattctctctctagccca
ggtctaggctccaggcttggggtaccctgctctg
gaattccacaggcccactatggccaccagctacagccagagggtttcaaa
gacaccaaactctgaatcaaaatgcacctgactgctgctcagacttaaaa
gactgtgggcagcaagggctgtggttggcagggcagcctgtaggctttgg
catggcatcctcagtttcctccccgactcctggccttctggaacttagtt
ctgtcccatcttggttcttcgaattattttcctattctgatagacaaatg
ttcttggctatttcctgtcctgccctcgaaggaaacacctcattatttag
caaaaccttcttgattttccatacctcctcaacccacctgagaatccata
catgcatatttcatgacacgttctccaccctaaccaagttacaggctccg
attaacatctcagaggctagtgggcagctttgaaatggggactttctgaa
caaaggcggttgctattaataaccaggacatggcataaaaacacatttac
agccacctgtgcctagtgggtcacacctgtaaagtgagctgcttcagagg
tggacacagaagaaccacaaagtcaaggccagcctgcaggacagcaggac
cctgtctcagaatgaagttttttttctttcttttctcttctagaaatctg
gtgacacagcccatcagtgaaatcctgggctcagctcccagctctcttct
cccaccttacccccaaactcacatttaagagaaaaaacatcctctcagaa
tctagatttttctcattagggttagaatccttctcaggaacccgtcagtt
cccctagaactacaggagagacaaaggagaaaggcagggaggctttggtg
tcctagaggcagaatcacttcatagaaataggaagcggggtctccagaca
ggaagtctgacttgatgaacaaggaaaggagaaaggaaggaagatagaga
ctttcaccgtctcagatgcccctttcctttctgtgtagaatcagattgtc
atactacagccatctggagtgtatccactataaaaaacctgactgaccta
gtgatttttttttttactagatcctagaaaaaaaattattaatgagtttg
gggactattcctgccagacatgacagctgcacctgactgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127157913_127159042
seq2: B6Ng01-255D10.b_45_1178

seq1  GAATTCTTACCCAAATGCAGCATCCTCCCAGCTTCAGCCCGTCTGCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCCAAATGCAGCATCCTCCCAGCTTCAGCCCGTCTGCCCAT  50

seq1  TAATAAATCGTTTCCTTCTTTCCTTGCTCAGATACATATGCGTATTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATCGTTTCCTTCTTTCCTTGCTCAGATACATATGCGTATTTATT  100

seq1  TCTTCCATTCCTTGACTTTTACAGAGTTGTACTCGGACCCTCCACCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATTCCTTGACTTTTACAGAGTTGTACTCGGACCCTCCACCCCCA  150

seq1  TTGCCCATGCCATGCGTCCCTTATGCTCCCGGGAGCCAGATAATACAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATGCCATGCGTCCCTTATGCTCCCGGGAGCCAGATAATACAGAC  200

seq1  AATAAGGAAAAGAAGGAGAATTGTCTCTGGCCTCCTTGACCGGCTGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGAAAAGAAGGAGAATTGTCTCTGGCCTCCTTGACCGGCTGAGCT  250

seq1  CTGGCTGAGTTTAGAGATACTGGGGTGGGGGTGCAGAAGTCTGGGATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAGTTTAGAGATACTGGGGTGGGGGTGCAGAAGTCTGGGATAGG  300

seq1  GCTCAGGTCGCAGGTGGCCAACAAGCTGATTCATTAAATGTGTCCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTCGCAGGTGGCCAACAAGCTGATTCATTAAATGTGTCCCTGGA  350

seq1  GGGACCACCCAAGGATGCCTTTCTTGGAGACGAGGCTTCTAAGAGATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCACCCAAGGATGCCTTTCTTGGAGACGAGGCTTCTAAGAGATAAA  400

seq1  GCCTGAAAAGAAGCCTAAGGCTTGCAGGTTGCAGGCTGAGGCAAGCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAAAGAAGCCTAAGGCTTGCAGGTTGCAGGCTGAGGCAAGCTGGG  450

seq1  ATACGCAGGGACAGCGCTCCCAGGATCTTCATCAGCCTCAGCCCCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGCAGGGACAGCGCTCCCAGGATCTTCATCAGCCTCAGCCCCAGAGA  500

seq1  TGGGCGACAGCACTCCCAGAAACCCTCTCCTCTCCATGCCCCACAGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGACAGCACTCCCAGAAACCCTCTCCTCTCCATGCCCCACAGCTGG  550

seq1  GACCCACAGCTGGCAGCCCCTGACAGGGGTAGACCCTCGATTCAGACGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGCTGGCAGCCCCTGACAGGGGTAGACCCTCGATTCAGACGTG  600

seq1  CGCATCTCTAGGACCGACTCCATCCCTCTTGTCTTCTGTTATTTCTTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCTCTAGGACCGACTCCATCCCTCTTGTCTTCTGTTATTTCTTCCG  650

seq1  TGTCGTTATCACTCATGGACCATGTCATGCAGCCTCACCGTCCCTGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTTATCACTCATGGACCATGTCATGCAGCCTCACCGTCCCTGCTTG  700

seq1  TGTGGGCTTTTGACAGTGTTAGTATGTAATATTTTGTAGAAAGCTATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTTTTGACAGTGTTAGTATGTAATATTTTGTAGAAAGCTATTGC  750

seq1  TCTATATCTTTTCCCACTGTCCTTTTTTTCTCTTTCCTCGTAGTCTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCTTTTCCCACTGTCCTTTTTTTCTCTTTCCTCGTAGTCTGTCC  800

seq1  TGTCTCACCACCCTGTTCTCTCTTCGGGGAACACGATGCACACAACAGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACCACCCTGTTCTCTCTTCGGGGAACACGATGCACACAACAGTA  850

seq1  AAATGTAGATCTGTACCCGGGGAGAGGCAGG-AAGGGCTGCTGTTGTTCC  899
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  AAATGTAGATCTGTACCCTGGGAGAGGCAGGAAAGGGCTGCTGTTGTTCC  900

seq1  TGTCTCTGGAAGTCTCCTCCTCTCCTCCTCCCCACCCTCCCTGCCTCCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGGAAGTCTCCTCCTCTCCTCCTCCCCACCCTCCCTGCCTCCTC  950

seq1  CACTAAGCTCTGAGCTCTATGAGTTCTGAGGCTGGGGGCCCTTGCAGCCT  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CACTAAGCTCTGAGCTCTATGAGTTCTGAGGCTGGGGGCCCTTGCAGCTT  1000

seq1  CCATCGGT-AGGCAGCTCACGGGCCCAAGTAATCACGC-TGGTGGGG--A  1045
      | |||||| |||||||||||||||| |  || |||||| ||||||||  |
seq2  CAATCGGTAAGGCAGCTCACGGGCCAAGTTATTCACGCTTGGTGGGGGAA  1050

seq1  GACCTGATTAACTATCCTTCCTGCCTGCAGATTAA-TCTCTCTCTAGCCC  1094
      ||||||||| |||||||||| |||||||||||||| ||||||||||| ||
seq2  GACCTGATT-ACTATCCTTCTTGCCTGCAGATTAATTCTCTCTCTAG-CC  1098

seq1  CAGGCCCAAGCCCCAGGCTTGGTGTACCCTGCTCTG  1130
      |||| | | || |||||||||| |||||||||||||
seq2  CAGGTCTAGGCTCCAGGCTTGGGGTACCCTGCTCTG  1134

seq1: chr10_127331123_127332285
seq2: B6Ng01-255D10.g_67_1208 (reverse)

seq1  AGTCAGGTTCAAGGTGCCAAGCCTGTCATGTCTTGGCAGGGAATAGTTCC  50
      ||||||  || ||||||  || |||||||||| ||||| ||||||| |||
seq2  AGTCAG--TC-AGGTGC--AG-CTGTCATGTC-TGGCA-GGAATAG-TCC  41

seq1  CCAAACTCCATTTAATAATTTTTTTTTCTAGGAATCTATGTAAAAAAAAA  100
      ||||||||   ||||||| ||||||||||||| ||||| |||||||||||
seq2  CCAAACTC--ATTAATAA-TTTTTTTTCTAGG-ATCTA-GTAAAAAAAAA  86

seq1  AATCCAACTAGGTCAGTCAAGGTTTTTTATAGTGATTACAACTCAAGATG  150
      ||||  |||||||||||| |||||||||||||||  ||| |||| |||||
seq2  AATC--ACTAGGTCAGTC-AGGTTTTTTATAGTGGATAC-ACTCCAGATG  132

seq1  GCTGTAGTTATGACAATCTGATTCTACACAGAAAGGAAAGGGGCATCTTG  200
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  GCTGTAG-TATGACAATCTGATTCTACACAGAAAGGAAAGGGGCATC-TG  180

seq1  AGACGGTGAAAGTCTCTATTCTTCCCTTCCTTTCTCCTTTCCTTGTTCAT  250
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  AGACGGTGAAAGTCTCTA-TCTT-CCTTCCTTTCTCCTTTCCTTGTTCAT  228

seq1  CAAGTCAGACTTCCTGTCTGGAGACCCCGCTTCCTATTTCTATGAAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGACTTCCTGTCTGGAGACCCCGCTTCCTATTTCTATGAAGTGA  278

seq1  TTCTGCCTCTAGGACACCAAAGCCTCCCTGCC-TTCTCCTTTGTCTCTCC  349
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTCTGCCTCTAGGACACCAAAGCCTCCCTGCCTTTCTCCTTTGTCTCTCC  328

seq1  TGTAGTTCTAGGGGAACTGACGGGTTCCTGAGAAGGATTCTAACCCTAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCTAGGGGAACTGACGGGTTCCTGAGAAGGATTCTAACCCTAAT  378

seq1  GAGAAAAATCTAGATTCTGAGAGGATGTTTTTTCTCTTAAATGTGAGTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATCTAGATTCTGAGAGGATGTTTTTTCTCTTAAATGTGAGTTT  428

seq1  GGGGGTAAGGTGGGAGAAGAGAGCTGGGAGCTGAGCCCAGGATTTCACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTAAGGTGGGAGAAGAGAGCTGGGAGCTGAGCCCAGGATTTCACTG  478

seq1  ATGGGCTGTGTCACCAGATTTCTAGAAGAGAAAAGAAAGAAAAAAAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGTGTCACCAGATTTCTAGAAGAGAAAAGAAAGAAAAAAAACTT  528

seq1  CATTCTGAGACAGGGTCCTGCTGTCCTGCAGGCTGGCCTTGACTTTGTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGAGACAGGGTCCTGCTGTCCTGCAGGCTGGCCTTGACTTTGTGG  578

seq1  TTCTTCTGTGTCCACCTCTGAAGCAGCTCACTTTACAGGTGTGACCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGTGTCCACCTCTGAAGCAGCTCACTTTACAGGTGTGACCCACT  628

seq1  AGGCACAGGTGGCTGTAAATGTGTTTTTATGCCATGTCCTGGTTATTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACAGGTGGCTGTAAATGTGTTTTTATGCCATGTCCTGGTTATTAAT  678

seq1  AGCAACCGCCTTTGTTCAGAAAGTCCCCATTTCAAAGCTGCCCACTAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCGCCTTTGTTCAGAAAGTCCCCATTTCAAAGCTGCCCACTAGCC  728

seq1  TCTGAGATGTTAATCGGAGCCTGTAACTTGGTTAGGGTGGAGAACGTGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATGTTAATCGGAGCCTGTAACTTGGTTAGGGTGGAGAACGTGTC  778

seq1  ATGAAATATGCATGTATGGATTCTCAGGTGGGTTGAGGAGGTATGGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATGCATGTATGGATTCTCAGGTGGGTTGAGGAGGTATGGAAAA  828

seq1  TCAAGAAGGTTTTGCTAAATAATGAGGTGTTTCCTTCGAGGGCAGGACAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGGTTTTGCTAAATAATGAGGTGTTTCCTTCGAGGGCAGGACAG  878

seq1  GAAATAGCCAAGAACATTTGTCTATCAGAATAGGAAAATAATTCGAAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCCAAGAACATTTGTCTATCAGAATAGGAAAATAATTCGAAGAA  928

seq1  CCAAGATGGGACAGAACTAAGTTCCAGAAGGCCAGGAGTCGGGGAGGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATGGGACAGAACTAAGTTCCAGAAGGCCAGGAGTCGGGGAGGAAA  978

seq1  CTGAGGATGCCATGCCAAAGCCTACAGGCTGCCCTGCCAACCACAGCCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGATGCCATGCCAAAGCCTACAGGCTGCCCTGCCAACCACAGCCCT  1028

seq1  TGCTGCCCACAGTCTTTTAAGTCTGAGCAGCAGTCAGGTGCATTTTGATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCACAGTCTTTTAAGTCTGAGCAGCAGTCAGGTGCATTTTGATT  1078

seq1  CAGAGTTTGGTGTCTTTGAAACCCTCTGGCTGTAGCTGGTGGCCATAGTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTGGTGTCTTTGAAACCCTCTGGCTGTAGCTGGTGGCCATAGTG  1128

seq1  GGCCTGTGGAATTC  1163
      ||||||||||||||
seq2  GGCCTGTGGAATTC  1142