BAC Information

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BAC

Clone NameB6Ng01-255J13
Chromosome10 (Build37)
Map Location 47,713,037 - 47,714,172
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041632, LOC668252, LOC100042387, LOC100041663, LOC100042398
Downstream geneLOC546562, LOC100041689
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255J13.bB6Ng01-255J13.g
ACCGA061766GA061767
length1,1821,117
definitionB6Ng01-255J13.b B6Ng01-255J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatctaacagcagagaagcacctgaaaaaatg
ttcagcatccttaattatcagggaaatgcaaatcaaaacaaccctgagag
tccacctcacatcagtcagaatggctaagatcaaaaattcacatgacaac
agatgttggcaaggatggggagaaagaggtacactcctctattgttggtg
ggattacaagcttgtacaaccactctgaaaaaacagtctggtggttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcttggg
aatatacactgaagatgttccaacatgtaacaagaacacatggtccatta
tgttcatagcagccttatttttaatagccagattctggaaagaaaccaga
tatccctcaacagaagaatggatacagaatatgtggtacatttacacaat
ggagtactactcagctattaataagagtgaatttgtgaaactcctagaca
aatgaatggatctggagggcatcatcctgagtgaggtaacacaatcacaa
aagaactcacatgatatgtactcactgctaagtgcatattagccccaaaa
ccttagaatacccaagatacaatttgcaaaacacatgaaactcaagaaga
aggaagaccaaagtttggatatttcttccctccttagaatgaggaacaaa
atacctatggaatgagcaacagagacaaagtttggacctgagatggaaga
atggaccatgcagtgactgccatatccagggattcattccataatcagcc
accaaacacagacacaattgtatatgccagcaagattttgctgacatgac
cctgatatagctgtctcttatgaggctatgtcagtgtatggcaaatacag
aagtggatgctcacagtcatctattggatggaacacaccccagcctccca
gtgaaggagctagagaaagtacccaaggagctgaaggggtctgtaggagg
aacagcaatatgaactaaccagtacccctgagctcatgttctctgctgca
tatgcagcagagatagcctagtttgcaatctttggaaggagagatccctt
ggtcttgcagaattatatgtcccagttacaggggaataacagggtcagaa
tcaggaatgggttaggttgtggggagatacgc

gaattcagtctgcactggacttgaatgagatagttttatttaattaaatc
ccatggaaaaggggaaaaggaaaagggaaaggcaggattcaaattagact
agtatattttattgctggacagtgctcaattgaaatgattatatccaaaa
tttgtctaatttggtctgatcaggcttaaggtaacaattataactgttct
cactctagcagcatttgccatggataagacaagcatggaacatggatgtt
tgatcagaaattataaacagtacattaaaatagatgaaaacttttgagaa
gtggagttggttttctattatatatctgagtgaggctgctcattgggaac
aattagatatttgaagttgtagaatgacaacaaggaaaagattgcctgca
aatatttacactcagacctttacagcacacttttgttcaagaggcttaac
aaacatatgctcccattatgtgttccctatcatcttaattctatctgaaa
tttagttgttaagcagagtaaagttttcatttggttttgagtgttttgca
gtaaaattaacatttctgaagcctttcttgagatgtaggctatgctcagc
ttgaccctctgaactggccctttctgatatgctaacccacactgagttca
catgctgagcaattgaatagaaaactgaatgcacttctaattacctgtcc
ttcttatttattcttctaagagatagctggtctgctggttccctgcaggt
ctttcctataatcattaaacatttcaaggagcagttggtttatgttaaaa
gttcaatatggcataactatttttcttcatcttctgagaggaaataattt
cagtcttgtttgagtattctactacacagtatctcaccgaggagtcagaa
atttaatgagttgaaggcagctaagttgtattttcaaatgtagaaggcaa
tgaagtagacatgcagtgccttattttcttccccaatgccacaaaaatag
catccatatgattgtgtacaagaaatattactttacatgtcctagcatac
atagatcctaccacagaccagtagctgtcttcaccagatccagtgaatat
atttaatctacactcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47713037_47714172
seq2: B6Ng01-255J13.g_69_1185

seq1  GAATTCAGTCTGCACTGGACTTGAATGAGATAGTTTTATTTAATTAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTGCACTGGACTTGAATGAGATAGTTTTATTTAATTAAATC  50

seq1  CCATGGAAAAGGGGAAAAGGAAAAGGGAAAGGCAGGATTCAAATTAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAAAGGGGAAAAGGAAAAGGGAAAGGCAGGATTCAAATTAGACT  100

seq1  AGTATATTTTATTGCTGGACAGTGCTCAATTGAAATGATTATATCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTTATTGCTGGACAGTGCTCAATTGAAATGATTATATCCAAAA  150

seq1  TTTGTCTAATTTGGTCTGATCAGGCTTAAGGTAACAATTATAACTGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTAATTTGGTCTGATCAGGCTTAAGGTAACAATTATAACTGTTCT  200

seq1  CACTCTAGCAGCATTTGCCATGGATAAGACAAGCATGGAACATGGATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAGCAGCATTTGCCATGGATAAGACAAGCATGGAACATGGATGTT  250

seq1  TGATCAGAAATTATAAACAGTACATTAAAATAGATGAAAACTTTTGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGAAATTATAAACAGTACATTAAAATAGATGAAAACTTTTGAGAA  300

seq1  GTGGAGTTGGTTTTCTATTATATATCTGAGTGAGGCTGCTCATTGGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTGGTTTTCTATTATATATCTGAGTGAGGCTGCTCATTGGGAAC  350

seq1  AATTAGATATTTGAAGTTGTAGAATGACAACAAGGAAAAGATTGCCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGATATTTGAAGTTGTAGAATGACAACAAGGAAAAGATTGCCTGCA  400

seq1  AATATTTACACTCAGACCTTTACAGCACACTTTTGTTCAAGAGGCTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTACACTCAGACCTTTACAGCACACTTTTGTTCAAGAGGCTTAAC  450

seq1  AAACATATGCTCCCATTATGTGTTCCCTATCATCTTAATTCTATCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATGCTCCCATTATGTGTTCCCTATCATCTTAATTCTATCTGAAA  500

seq1  TTTAGTTGTTAAGCAGAGTAAAGTTTTCATTTGGTTTTGAGTGTTTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTTAAGCAGAGTAAAGTTTTCATTTGGTTTTGAGTGTTTTGCA  550

seq1  GTAAAATTAACATTTCTGAAGCCTTTCTTGAGATGTAGGCTATGCTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTAACATTTCTGAAGCCTTTCTTGAGATGTAGGCTATGCTCAGC  600

seq1  TTGACCCTCTGAACTGGCCCTTTCTGATATGCTAACCCACACTGAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCTCTGAACTGGCCCTTTCTGATATGCTAACCCACACTGAGTTCA  650

seq1  CATGCTGAGCAATTGAATAGAAAACTGAATGCACTTCTAATTACCTGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGAGCAATTGAATAGAAAACTGAATGCACTTCTAATTACCTGTCC  700

seq1  TTCTTATTTATTCTTCTAAGAGATAGCTGGTCTGCTGGTTCCCTGCAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTATTCTTCTAAGAGATAGCTGGTCTGCTGGTTCCCTGCAGGT  750

seq1  CTTTCCTATAATCATTAAACATTTCAAGGAGCAGTTGGTTTATGTTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTATAATCATTAAACATTTCAAGGAGCAGTTGGTTTATGTTAAAA  800

seq1  GTTCAATATGGCATAACTATTTTTCTTCATCTTCTGAGAGGAAATAA-TT  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTCAATATGGCATAACTATTTTTCTTCATCTTCTGAGAGGAAATAATTT  850

seq1  CAGTCTTGTTTGAGTATTCTACTACACAGTATCTCACCGAGGAGTCAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGTTTGAGTATTCTACTACACAGTATCTCACCGAGGAGTCAGAA  900

seq1  ATTTAATGAGTTTGAAGGCAGCTAAGTTGTATTTTCAAATGTAGAAGGCA  949
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGAG-TTGAAGGCAGCTAAGTTGTATTTTCAAATGTAGAAGGCA  949

seq1  ATGAAGTAGACATGCAGTG-CTTATTTTCTTCCCCAATTGCACAAAAATA  998
      ||||||||||||||||||| ||||||||||||||||||  ||||||||||
seq2  ATGAAGTAGACATGCAGTGCCTTATTTTCTTCCCCAATGCCACAAAAATA  999

seq1  GCATCCCATATTGATTGGTGTACAAGAAATATAACTTTACAATGTCCTAA  1048
      |||| ||||| ||||| ||||||||||||||| ||||||| ||||||| |
seq2  GCAT-CCATA-TGATT-GTGTACAAGAAATATTACTTTAC-ATGTCCT-A  1044

seq1  GCATACCATAGATCCCTACCACCAAGACACAAGGGAGCCTGTCTTCACCA  1098
      ||||| ||||||| ||||||||  |||| ||  | || ||||||||||||
seq2  GCATA-CATAGAT-CCTACCAC--AGAC-CA--GTAG-CTGTCTTCACCA  1086

seq1  GGATTCCAAGGTGGAATATATTTAAATCTAACACTCCA  1136
      |   ||||  || |||||||||| ||||| ||||||||
seq2  G--ATCCA--GT-GAATATATTT-AATCT-ACACTCCA  1117


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