BAC Information

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BAC

Clone NameB6Ng01-255K03
Chromosome10 (Build37)
Map Location 91,644,677 - 91,792,277
singlet/doubletdoublet
Overlap geneLOC667203
Upstream geneLOC100041769, LOC100041799
Downstream geneLOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K03.bB6Ng01-255K03.g
ACCGA061794GA061795
length1,1311,202
definitionB6Ng01-255K03.b B6Ng01-255K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,644,677 - 91,645,808)(91,791,080 - 91,792,277)
sequence
gaattctttagattcagaatgttagttcttatagtctttgaaaacaaagg
acaaaatacatattttaagaagaatttggttttatttattaatcggtatt
gaaaataatcacatataatgtcctgattattaaaatttagttgaaagaaa
attgagccaaatgaatgtctaataagtgcagataccctcgcatcccacag
tgagtagttatttctgatcataatgaattagggacatttcaagatctaat
atggcaagctattgttcttcacatattattctttataatacaaatataag
gaaaagacctaagtcatccaacatgagagataaaattggtacaagacaga
ttcctggattttttacgattgtagattgacgatctcactgtgcagcttag
gttggctgccctagttttatctatgctgttgtaataaaacactttaagca
aatgcaacataagagatgataaggtttgtttcagctcacaggctacagcc
cagtactgaggggagtcagcaggatcttaaaggggaaactacagaaacat
agcttcctggctggttcttaggctcattctagtgatagcagtctctattc
ctaaaaaatatttatttcagttaaaaatgatgtgtatgttggtgacctag
agctggaggcccaggtggtttaagctggatggcaaaggtgcagggaacct
aactaatgtcctctgcaaaagccattcacactctttattattatcatcat
catcatcattaatcttacttttacagtctagttgctattcccctctcatt
ctgccctctgatattttctcattccgttcctccccaacccgtctccaaga
ggatgtccccacccccatacacagccccacacccacacccacacccacag
gcctcccgattcctagggtctcaagtctcttgagagttaggtacacttct
cccattgaggccagaccaggcagtccttctgctgtatgtgctgggagcct
catattcagcctgatgttatgctgcctagtggtggctcagtgtctgagaa
gatccttgggtatcaagaccatcctggaccccttccctgcaaacatgctt
cagccatccagtcctaagaatctgtccactg
gaattctatgctgccctgttcaggtggttgcaagtactaaggcatgatgg
gaagcttaggaaaccagagaactggattcgacgggccatcacctagagat
gctgatggatgggatggcggtgacctgtctcctgcatttttggaagctac
aaacccatactttataagtaatttctagactttttaaaggtattgaaata
agacagacacaaataagaaagaggaagagggttggggaggaagaaaagga
tgaagtaattgaaagcacttttatgaaccaaataaaacagaatctactct
gtcccacttgcttattcaaatacagccaaacctgagattgcagcttagtc
ctctcttctctcccaagccatctttacttttcttgacctctgtgttcttt
ctgactaaagtctcttgtacagacagagatgacaatggggctgtgagcac
agggggcagagcatcagtgtgtaaagtcagctgccagctgtgcaaccttg
gaccaaggactcagctctttacactctaactcttcaccccatgatggaaa
agatacatgctgttgacttggcagaaagatgagggatttgtgtctcctgc
tttcagcacagtgactggcacaggggaagtcaccagcagaagtcagctct
cactactcccattctgtaagcagtcatcatacctagcctgtattctagag
ccagctttcccagttagcatcttgagtcataccttctacctgtgtgacct
gaggctatttgatggccttaaccatgggaacttagttttctcatgtgtgc
aatgaagataaggccacctaagtttttctgaagaaaatgggagtcaataa
ccacaaaaaaccacaaacaagcaaacaagaaaaacaaacaaataaacaaa
caacaaaaaacccaaaacaccagtttctaacagtgactaatacttgtctt
aatgtaaattagatgcctctgattatggttacatgcataacaatgccata
aacagaggaactttttatcagttgcttccaatatattattttctggtcta
taccagccgactaccacactcttaatcctagatacatctgtacttcctgc
tgcttttgttattaaatttgattagattgtagaatgccaccccggctgga
atatgtcttcattgggcctttcagggtagatgaatccggcccacacacaa
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91644677_91645808
seq2: B6Ng01-255K03.b_46_1176

seq1  GAATTCTTTAGATTCAGAATGTTAGTTCTTATAGTCTTTGAAAACAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGATTCAGAATGTTAGTTCTTATAGTCTTTGAAAACAAAGG  50

seq1  ACAAAATACATATTTTAAGAAGAATTTGGTTTTATTTATTAATCGGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATACATATTTTAAGAAGAATTTGGTTTTATTTATTAATCGGTATT  100

seq1  GAAAATAATCACATATAATGTCCTGATTATTAAAATTTAGTTGAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAATCACATATAATGTCCTGATTATTAAAATTTAGTTGAAAGAAA  150

seq1  ATTGAGCCAAATGAATGTCTAATAAGTGCAGATACCCTCGCATCCCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCCAAATGAATGTCTAATAAGTGCAGATACCCTCGCATCCCACAG  200

seq1  TGAGTAGTTATTTCTGATCATAATGAATTAGGGACATTTCAAGATCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGTTATTTCTGATCATAATGAATTAGGGACATTTCAAGATCTAAT  250

seq1  ATGGCAAGCTATTGTTCTTCACATATTATTCTTTATAATACAAATATAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGCTATTGTTCTTCACATATTATTCTTTATAATACAAATATAAG  300

seq1  GAAAAGACCTAAGTCATCCAACATGAGAGATAAAATTGGTACAAGACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACCTAAGTCATCCAACATGAGAGATAAAATTGGTACAAGACAGA  350

seq1  TTCCTGGATTTTTTACGATTGTAGATTGACGATCTCACTGTGCAGCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGATTTTTTACGATTGTAGATTGACGATCTCACTGTGCAGCTTAG  400

seq1  GTTGGCTGCCCTAGTTTTATCTATGCTGTTGTAATAAAACACTTTAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGCCCTAGTTTTATCTATGCTGTTGTAATAAAACACTTTAAGCA  450

seq1  AATGCAACATAAGAGATGATAAGGTTTGTTTCAGCTCACAGGCTACAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAACATAAGAGATGATAAGGTTTGTTTCAGCTCACAGGCTACAGCC  500

seq1  CAGTACTGAGGGGAGTCAGCAGGATCTTAAAGGGGAAACTACAGAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTGAGGGGAGTCAGCAGGATCTTAAAGGGGAAACTACAGAAACAT  550

seq1  AGCTTCCTGGCTGGTTCTTAGGCTCATTCTAGTGATAGCAGTCTCTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTGGCTGGTTCTTAGGCTCATTCTAGTGATAGCAGTCTCTATTC  600

seq1  CTAAAAAATATTTATTTCAGTTAAAAATGATGTGTATGTTGGTGACCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAATATTTATTTCAGTTAAAAATGATGTGTATGTTGGTGACCTAG  650

seq1  AGCTGGAGGCCCAGGTGGTTTAAGCTGGATGGCAAAGGTGCAGGGAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGGCCCAGGTGGTTTAAGCTGGATGGCAAAGGTGCAGGGAACCT  700

seq1  AACTAATGTCCTCTGCAAAAGCCATTCACACTCTTTATTATTATCATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATGTCCTCTGCAAAAGCCATTCACACTCTTTATTATTATCATCAT  750

seq1  CATCATCATTAATCTTACTTTTACAGTCTAGTTGCTATTCCCCTCTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATTAATCTTACTTTTACAGTCTAGTTGCTATTCCCCTCTCATT  800

seq1  CTGCCCTCTGATATTTTCTCATTCCGTTCCTCCCCAACCCGTCTCCAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTCTGATATTTTCTCATTCCGTTCCTCCCCAACCCGTCTCCAAGA  850

seq1  GGATGTCCCCACCCCCATACACAGCCCCACACCCACACCCACACCCACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCCCCACCCCCATACACAGCCCCACACCCACACCCACACCCACAG  900

seq1  GCCTCCCGATTCCCTAGGGTCTCAAGTCTCTTGAGAGTTAGGTACAACTT  950
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  GCCTCCCGATT-CCTAGGGTCTCAAGTCTCTTGAGAGTTAGGTAC-ACTT  948

seq1  CTCCCATTGAGGCCAGACCAGGCAGTCC-TCTGCTGTATGTGCTGGGAGC  999
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTCCCATTGAGGCCAGACCAGGCAGTCCTTCTGCTGTATGTGCTGGGAGC  998

seq1  CTCATA-TCAG-CTGATG-TATGCTGCCTAGTTGGTGGCTCAGTGTCTGA  1046
      |||||| |||| |||||| |||||||||||| ||||||||||||||||||
seq2  CTCATATTCAGCCTGATGTTATGCTGCCTAG-TGGTGGCTCAGTGTCTGA  1047

seq1  G-AGAT-CTTGGGTATCAAGACCATCCTGGACCCCCTTCCCTGCAGACAT  1094
      | |||| |||||||||||||||||||||||| ||||||||||||| ||||
seq2  GAAGATCCTTGGGTATCAAGACCATCCTGGA-CCCCTTCCCTGCAAACAT  1096

seq1  GCCTTCAGGCCAATCCAGT-CTAAGAAATCTGTCAACTG  1132
      | ||||||  | ||||||| ||||| |||||||| ||||
seq2  G-CTTCAG--CCATCCAGTCCTAAG-AATCTGTCCACTG  1131

seq1: chr10_91791080_91792277
seq2: B6Ng01-255K03.g_68_1269 (reverse)

seq1  GCTTG---GTGGGCCTGATTCATCTACCATGAAAGCCCAAAAGGAAGACA  47
      |||||   ||||||| |||||||||||| |||||| ||  || |||||||
seq2  GCTTGTGTGTGGGCCGGATTCATCTACCCTGAAAGGCC-CAATGAAGACA  49

seq1  TAATCAAAC--GGGT-GCA-TCTACATCCTAATACAATTTTATTAACAAA  93
      || || | |  |||| ||| ||||||  ||||| ||| |||| |||||||
seq2  TATTCCAGCCGGGGTGGCATTCTACAATCTAAT-CAAATTTAATAACAAA  98

seq1  AGCAAGCA-GAAGTACAGATGTATCCTTAGGAAT-AGAGTGT-GTAGGTC  140
      ||| |||| ||||||||||||||||  ||||| | ||||||| ||||   
seq2  AGC-AGCAGGAAGTACAGATGTATC--TAGGATTAAGAGTGTGGTAGTCG  145

seq1  GCTGGTATAGA-CAG-AAATAATATATTGGAAGCAACTGATAAAAAGTTC  188
      ||||||||||| ||| ||||||||||||||||||||||||||||||||||
seq2  GCTGGTATAGACCAGAAAATAATATATTGGAAGCAACTGATAAAAAGTTC  195

seq1  CTCTGTTTATTGCATTTGTTATGCATGTTACCATAATCAGAGGCATCTTA  238
      |||||||||| ||| ||||||||||||| ||||||||||||||||||| |
seq2  CTCTGTTTATGGCA-TTGTTATGCATGTAACCATAATCAGAGGCATCTAA  244

seq1  ATTACATTAAGACAAGTATTAGTCACTGTTAGAAACTGGTGTTTTGGGTT  288
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTAAGACAAGTATTAGTCACTGTTAGAAACTGGTGTTTTGGGTT  294

seq1  TTTTGTTTGTTTGTTTATTTGTTTGTTTTTCTTGTTTGCTTGTTTGTGGT  338
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTG-TTGTTTGTTTATTTGTTTGTTTTTCTTGTTTGCTTGTTTGTGG-  342

seq1  TTTTTTGTGGTTATTGACTCCCATTTTCTTCAGAAAAACTTAGGTGGCCT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTGGTTATTGACTCCCATTTTCTTCAGAAAAACTTAGGTGGCCT  392

seq1  TATCTTCATTGCACACATGAGAAAACTAAGTTCCCATGGTTAAGGCCATC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCATTGCACACATGAGAAAACTAAGTTCCCATGGTTAAGGCCATC  442

seq1  AAATAGCCTCAGGTCACACAGGTAGAAGGTATGACTCAAGATGCTAACTG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCCTCAGGTCACACAGGTAGAAGGTATGACTCAAGATGCTAACTG  492

seq1  GGAAAGCTGGCTCTAGAATACAGGCTAGGTATGATGACTGCTTACAGAAT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCTGGCTCTAGAATACAGGCTAGGTATGATGACTGCTTACAGAAT  542

seq1  GGGAGTAGTGAGAGCTGACTTCTGCTGGTGACTTCCCCTGTGCCAGTCAC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAGTGAGAGCTGACTTCTGCTGGTGACTTCCCCTGTGCCAGTCAC  592

seq1  TGTGCTGAAAGCAGGAGACACAAATCCCTCATCTTTCTGCCAAGTCAACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGAAAGCAGGAGACACAAATCCCTCATCTTTCTGCCAAGTCAACA  642

seq1  GCATGTATCTTTTCCATCATGGGGTGAAGAGTTAGAGTGTAAAGAGCTGA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATCTTTTCCATCATGGGGTGAAGAGTTAGAGTGTAAAGAGCTGA  692

seq1  GTCCTTGGTCCAAGGTTGCACAGCTGGCAGCTGACTTTACACACTGATGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGGTCCAAGGTTGCACAGCTGGCAGCTGACTTTACACACTGATGC  742

seq1  TCTGCCCCCTGTGCTCACAGCCCCATTGTCATCTCTGTCTGTACAAGAGA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCCCTGTGCTCACAGCCCCATTGTCATCTCTGTCTGTACAAGAGA  792

seq1  CTTTAGTCAGAAAGAACACAGAGGTCAAGAAAAGTAAAGATGGCTTGGGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTCAGAAAGAACACAGAGGTCAAGAAAAGTAAAGATGGCTTGGGA  842

seq1  GAGAAGAGAGGACTAAGCTGCAATCTCAGGTTTGGCTGTATTTGAATAAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAGGACTAAGCTGCAATCTCAGGTTTGGCTGTATTTGAATAAG  892

seq1  CAAGTGGGACAGAGTAGATTCTGTTTTATTTGGTTCATAAAAGTGCTTTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGACAGAGTAGATTCTGTTTTATTTGGTTCATAAAAGTGCTTTC  942

seq1  AATTACTTCATCCTTTTCTTCCTCCCCAACCCTCTTCCTCTTTCTTATTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTCATCCTTTTCTTCCTCCCCAACCCTCTTCCTCTTTCTTATTT  992

seq1  GTGTCTGTCTTATTTCAATACCTTTAAAAAGTCTAGAAATTACTTATAAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTCTTATTTCAATACCTTTAAAAAGTCTAGAAATTACTTATAAA  1042

seq1  GTATGGGTTTGTAGCTTCCAAAAATGCAGGAGACAGGTCACCGCCATCCC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGTTTGTAGCTTCCAAAAATGCAGGAGACAGGTCACCGCCATCCC  1092

seq1  ATCCATCAGCATCTCTAGGTGATGGCCCGTCGAATCCAGTTCTCTGGTTT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAGCATCTCTAGGTGATGGCCCGTCGAATCCAGTTCTCTGGTTT  1142

seq1  CCTAAGCTTCCCATCATGCCTTAGTACTTGCAACCACCTGAACAGGGCAG  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGCTTCCCATCATGCCTTAGTACTTGCAACCACCTGAACAGGGCAG  1192

seq1  CATAGAATTC  1198
      ||||||||||
seq2  CATAGAATTC  1202