BAC Information

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BAC

Clone NameB6Ng01-255N07
Chromosome10 (Build37)
Map Location 123,321,699 - 123,421,941
singlet/doubletdoublet
Overlap genenone
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255N07.bB6Ng01-255N07.g
ACCGA061942GA061943
length1,0811,099
definitionB6Ng01-255N07.b B6Ng01-255N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,420,859 - 123,421,941)(123,321,699 - 123,322,805)
sequence
gaattctcagcacccattccaggaggctcacatattaggtatgtatgtct
atgcatgcacacgattttcccagttctgtggaatcttttgcatttgtcta
tgcatacagaaactaagtaaatagatgtacaaatggactgtttgacataa
tagattgttaggttactcatgcactacatgatacagaagaccacggctaa
tacctacgtgctataataatgcagtaggctcgcctaaacacataactagg
aatgaggatataaagcgatgccttttcttcaagttaataaataagtaaat
tcagactcctttttatttaaaaaaatgactttctgaattggagaaaaacc
atcgaatctctacttgataatgtcaaaaatctctaagcagtctgagtatg
tacacataacagttcatgaatttatcgagtttccagtggtggacagagtc
aattcttagagtcatttattacattaagctgttttcattttgactggcag
gaaggtcttcctagaagagctgtctgcatgagtgaaacaagctgcatctt
accctgtatgacgaagtgctgtgcacaagacacaagatatttaaacacaa
tttaaataatacagttcaatgaatgaaaatacagggtgcaggtttgtatg
cgacctgatttctcagggaaacttataaattttcgttagaatgagctcta
cagatctggtgcagatgtagttgttgtaaataaataagtacatgtacaag
attatatataacatatactgtttggtgaaaacttcatttaatatacatga
ctttaaaggaaggcataaacattgtagcatatgtatgtgtcgatgtattt
atgtgtgttgctttaagtgttaaaaataatggagaagaaaatacataaaa
aattattcacatcctcccagtgaatctgaatctcagatttaaaagaactc
tcttgaccaggttcagaaattattacagtgcaattgaaatggttgaatcc
cacattttctttgttttttatacaaaacattggtatggttttagttttac
taaacacatgtcacagagaggtaaaagagag

gaattccttaagcaagagtctttgtctcctctcatcccatttctcagaga
attgtgagaagtatcgtaatgaaatgagattgtgattaggacaagccagt
ccagcgattctcaaatttattggggaataaaagttctttttcttcttctt
gacttggcataggtaatttcttccaagtaggacagtaatgaaaatgaact
gaggtaaacagaacacctacttcccaacagtagatgctaggagattggaa
tgactacttcggtcaccagcgccatcagataaaattcagtagaagaagaa
catcatcaggaacatacattttttttaagctaccaagtatgctacaatgc
taaagcagcatactccctatttccatatgtgtgcagaagacatataggcg
catgtgcatcctctgtgtgctctgatttataattaagtcttcattgttag
tcattgaacaaccactctactcatcaggtgtatttctaaggcccaatcag
agattcagacttagaagcacatccaagaacatgtttaaccctagacacta
caaacattccaaagtacaagaggaagctgggaaacgcagtgtattaattt
tctgtaaaaccccattctgcagagcatgaggaagttcagagattagaaga
tgagagtcccatcaggagaatgctagatgacctggaaaagaagcatcctg
ctctgtgtggggctcttggaacaccaccatagtttccaggagccttgcat
gaaagatgctagctagaagaatctctgtattaatggaagtcaagacccat
gtcttcatgattagatatttacagttccttcttatccagatgcaattttc
taagctggagtcatctgatggagttattaagaagctcaaactttatactg
tatagaaaggaattttacaaactgtttatctattgatgcaagctgattga
ataatctgcctaaagtcacagcactgggaattggaaagccatgagctgtc
agactaatcatctctgtggtggtaccaaaggccatcatctcaggctgcag
aacttcatgagagaaggactcttgaatgagaaagacaagaatgaataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123420859_123421941
seq2: B6Ng01-255N07.b_46_1126 (reverse)

seq1  CTCT-TTTTACCTCTCTGTGACATTGTGGTTTAGTAAAACTAAAACCATA  49
      |||| |||||||||||||||||| ||| ||||||||||||||||||||||
seq2  CTCTCTTTTACCTCTCTGTGACA-TGT-GTTTAGTAAAACTAAAACCATA  48

seq1  CCAATTGTTTTGTATAAAAAACAAAGAAAAATGTGGGATTCAACCATTTC  99
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCAA-TGTTTTGTATAAAAAACAAAG-AAAATGTGGGATTCAACCATTTC  96

seq1  AATTGCACTGTAATAATTTCTGAACCTGGTC-AGAGAGTTCTTTTAAATC  148
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATTGCACTGTAATAATTTCTGAACCTGGTCAAGAGAGTTCTTTTAAATC  146

seq1  TGAGATTCAGATTCACTGGGAGGATGTGAATAATTTTTTATGTATTTTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCAGATTCACTGGGAGGATGTGAATAATTTTTTATGTATTTTCT  196

seq1  TCTCCATTATTTTTAACACTTAAAGCAACACACATAAATACATCGACACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTATTTTTAACACTTAAAGCAACACACATAAATACATCGACACA  246

seq1  TACATATGCTACAATGTTTATGCCTTCCTTTAAAGTCATGTATATTAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCTACAATGTTTATGCCTTCCTTTAAAGTCATGTATATTAAAT  296

seq1  GAAGTTTTCACCAAACAGTATATGTTATATATAATCTTGTACATGTACTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTTCACCAAACAGTATATGTTATATATAATCTTGTACATGTACTT  346

seq1  ATTTATTTACAACAACTACATCTGCACCAGATCTGTAGAGCTCATTCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTACAACAACTACATCTGCACCAGATCTGTAGAGCTCATTCTAA  396

seq1  CGAAAATTTATAAGTTTCCCTGAGAAATCAGGTCGCATACAAACCTGCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAATTTATAAGTTTCCCTGAGAAATCAGGTCGCATACAAACCTGCAC  446

seq1  CCTGTATTTTCATTCATTGAACTGTATTATTTAAATTGTGTTTAAATATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTTTCATTCATTGAACTGTATTATTTAAATTGTGTTTAAATATC  496

seq1  TTGTGTCTTGTGCACAGCACTTCGTCATACAGGGTAAGATGCAGCTTGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTTGTGCACAGCACTTCGTCATACAGGGTAAGATGCAGCTTGTT  546

seq1  TCACTCATGCAGACAGCTCTTCTAGGAAGACCTTCCTGCCAGTCAAAATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATGCAGACAGCTCTTCTAGGAAGACCTTCCTGCCAGTCAAAATG  596

seq1  AAAACAGCTTAATGTAATAAATGACTCTAAGAATTGACTCTGTCCACCAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCTTAATGTAATAAATGACTCTAAGAATTGACTCTGTCCACCAC  646

seq1  TGGAAACTCGATAAATTCATGAACTGTTATGTGTACATACTCAGACTGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTCGATAAATTCATGAACTGTTATGTGTACATACTCAGACTGCT  696

seq1  TAGAGATTTTTGACATTATCAAGTAGAGATTCGATGGTTTTTCTCCAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTTTTGACATTATCAAGTAGAGATTCGATGGTTTTTCTCCAATT  746

seq1  CAGAAAGTCATTTTTTTAAATAAAAAGGAGTCTGAATTTACTTATTTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTCATTTTTTTAAATAAAAAGGAGTCTGAATTTACTTATTTATT  796

seq1  AACTTGAAGAAAAGGCATCGCTTTATATCCTCATTCCTAGTTATGTGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAGAAAAGGCATCGCTTTATATCCTCATTCCTAGTTATGTGTTT  846

seq1  AGGCGAGCCTACTGCATTATTATAGCACGTAGGTATTAGCCGTGGTCTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAGCCTACTGCATTATTATAGCACGTAGGTATTAGCCGTGGTCTTC  896

seq1  TGTATCATGTAGTGCATGAGTAACCTAACAATCTATTATGTCAAACAGTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATGTAGTGCATGAGTAACCTAACAATCTATTATGTCAAACAGTC  946

seq1  CATTTGTACATCTATTTACTTAGTTTCTGTATGCATAGACAAATGCAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTACATCTATTTACTTAGTTTCTGTATGCATAGACAAATGCAAAA  996

seq1  GATTCCACAGAACTGGGAAAATCGTGTGCATGCATAGACATACATACCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCACAGAACTGGGAAAATCGTGTGCATGCATAGACATACATACCTA  1046

seq1  ATATGTGAGCCTCCTGGAATGGGTGCTGAGAATTC  1083
      |||||||||||||||||||||||||||||||||||
seq2  ATATGTGAGCCTCCTGGAATGGGTGCTGAGAATTC  1081


seq1: chr10_123321699_123322805
seq2: B6Ng01-255N07.g_68_1166

seq1  GAATTCCTTAAGCAAGAGTCTTTGTCTCCTCTCATCCCATTTCTCAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGCAAGAGTCTTTGTCTCCTCTCATCCCATTTCTCAGAGA  50

seq1  ATTGTGAGAAGTATCGTAATGAAATGAGATTGTGATTAGGACAAGCCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAGAAGTATCGTAATGAAATGAGATTGTGATTAGGACAAGCCAGT  100

seq1  CCAGCGATTCTCAAATTTATTGGGGAATAAAAGTTCTTTTTCTTCTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGATTCTCAAATTTATTGGGGAATAAAAGTTCTTTTTCTTCTTCTT  150

seq1  GACTTGGCATAGGTAATTTCTTCCAAGTAGGACAGTAATGAAAATGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCATAGGTAATTTCTTCCAAGTAGGACAGTAATGAAAATGAACT  200

seq1  GAGGTAAACAGAACACCTACTTCCCAACAGTAGATGCTAGGAGATTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAAACAGAACACCTACTTCCCAACAGTAGATGCTAGGAGATTGGAA  250

seq1  TGACTACTTCGGTCACCAGCGCCATCAGATAAAATTCAGTAGAAGAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACTTCGGTCACCAGCGCCATCAGATAAAATTCAGTAGAAGAAGAA  300

seq1  CATCATCAGGAACATACATTTTTTTTAAGCTACCAAGTATGCTACAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCAGGAACATACATTTTTTTTAAGCTACCAAGTATGCTACAATGC  350

seq1  TAAAGCAGCATACTCCCTATTTCCATATGTGTGCAGAAGACATATAGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGCATACTCCCTATTTCCATATGTGTGCAGAAGACATATAGGCG  400

seq1  CATGTGCATCCTCTGTGTGCTCTGATTTATAATTAAGTCTTCATTGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCATCCTCTGTGTGCTCTGATTTATAATTAAGTCTTCATTGTTAG  450

seq1  TCATTGAACAACCACTCTACTCATCAGGTGTATTTCTAAGGCCCAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAACAACCACTCTACTCATCAGGTGTATTTCTAAGGCCCAATCAG  500

seq1  AGATTCAGACTTAGAAGCACATCCAAGAACATGTTTAACCCTAGACACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAGACTTAGAAGCACATCCAAGAACATGTTTAACCCTAGACACTA  550

seq1  CAAACATTCCAAAGTACAAGAGGAAGCTGGGAAACGCAGTGTATTAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTCCAAAGTACAAGAGGAAGCTGGGAAACGCAGTGTATTAATTT  600

seq1  TCTGTAAAACCCCATTCTGCAGAGCATGAGGAAGTTCAGAGATTAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAACCCCATTCTGCAGAGCATGAGGAAGTTCAGAGATTAGAAGA  650

seq1  TGAGAGTCCCATCAGGAGAATGCTAGATGACCTGGAAAAGAAGCATCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTCCCATCAGGAGAATGCTAGATGACCTGGAAAAGAAGCATCCTG  700

seq1  CTCTGTGTGGGGCTCTTGGAACACCACCATAGTTTCCAGGAGCCTTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTGGGGCTCTTGGAACACCACCATAGTTTCCAGGAGCCTTGCAT  750

seq1  GAAAGATGCTAGCTAGAAGAATCTCTGTATTAATGGAAGTCAAGACCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATGCTAGCTAGAAGAATCTCTGTATTAATGGAAGTCAAGACCCAT  800

seq1  GTCTTCATGATTAGATATTTACAGTTCCTTCTTATCCAGATGCAATTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATGATTAGATATTTACAGTTCCTTCTTATCCAGATGCAATTTTC  850

seq1  TAAGCTGGAGTCATCTGATGGAGTTATTAAGAAGCTCAAACTTTATACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGGAGTCATCTGATGGAGTTATTAAGAAGCTCAAACTTTATACTG  900

seq1  TATAGAAAGGAATTTTACAAACTGTTTATCTATTGATGCAAGCTGATTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGGAATTTTACAAACTGTTTATCTATTGATGCAAGCTGATTGA  950

seq1  ATAATCTGCCTAAGGTCACAGCACTGGAAATTGGAAAGCCATGAGCTGTC  1000
      ||||||||||||| ||||||||||||| ||||||||||||||||||||||
seq2  ATAATCTGCCTAAAGTCACAGCACTGGGAATTGGAAAGCCATGAGCTGTC  1000

seq1  AAGACCTAAATTCATCTCTGT-GTGGTACCAAAAGCCATCATCCTTCAGG  1049
       ||| ||||  |||||||||| ||||||||||| |||||||||  ||| |
seq2  -AGA-CTAA--TCATCTCTGTGGTGGTACCAAAGGCCATCATC--TCA-G  1043

seq1  GCTGGCAGACTTCCATGAGAGAAGAACTCTTTGATGAGAAAGACAAGAAT  1099
      ||| |||||  | ||||||||||| ||||||  |||||||||||||||||
seq2  GCT-GCAGAACTTCATGAGAGAAGGACTCTTGAATGAGAAAGACAAGAAT  1092

seq1  GAAATAGA  1107
      | ||||||
seq2  G-AATAGA  1099


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