BAC Information

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BAC

Clone NameB6Ng01-255O02
Chromosome10 (Build37)
Map Location 6,691,723 - 6,869,490
singlet/doubletdoublet
Overlap geneIyd
Upstream geneEsr1, LOC100041310, Gm221, 1700052N19Rik, Rmnd1, Zbtb2, Akap12, Mthfd1l, Plekhg1
Downstream genePpp1r14c, EG666520, LOC100039303, LOC670558, LOC626333, LOC666541, 9230019H11Rik, LOC100041405, LOC672213, Lrp11, Pcmt1, Nup43, Lats1, Katna1, BC013529, Ppil4, LOC665035, Zc3h12d, Map3k7ip2, LOC100039046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255O02.bB6Ng01-255O02.g
ACCGA061980GA061981
length1,1221,017
definitionB6Ng01-255O02.b B6Ng01-255O02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,868,358 - 6,869,490)(6,691,723 - 6,692,381)
sequence
gaattcactaggacaaccggatccttctacggcaaagcttttattgcttc
aacataaggaagaccccgaacccggaaaatggtgctgcttatatagcccg
cagcgtgacgtttcagcacctgatgtggcgtgacagcacatgattagttg
ttcacccatcaccccattactacgccccgagatgggcagagactgggcgt
gaattcactcttgcacttacgcataaggcttgtttactagttaggcgcag
tggaagccagcgccatcttataatggcaattgctcacggcacggctctcc
acaggggattattcattggtaactgggaatgtaatttctattacagagtg
gaaatggtgtgttataattgacctgctagatgcttgtattgagctgtctg
agtctggatgtctcatagtttgtccacccaagacttcgtggaagctttta
aaggaccttgcaatatcacagggaagtctctttaaggaagtaggtggtgc
ctgcttactctgttgtgctttgtttggcttttaatataatccagccatag
cccacatctgcctccactaatgcattttgatttttggttctgaggccaag
ctttagtgccatgggtcttaaaagaaagaatccacaaggtgacaggcatc
agtgactagtcagaggcactggataaatataggcaccagcctggaagagg
tttcagtatcagcaggaaggcctgtgtgtatcactgggccctaccacacc
caagtctgcagctgcacaatcagcctcactacgctaactagggcacaggt
agagacacctgctgtgagtttgcagcattcttcacttctcattgagggag
atgtctggatgtgagggctgtgtcgctcagattatcattaggctgcttgc
agaataacccgttctacagctgtatggtgtgagcaccatctgggactaag
ctgtccactgatggagaggaaaggtaatatcagagatattgggtggctat
gaaacatacatgcagggtctggagagatagctcactatattgctgtcaca
gaaaaccccactcattcctcaggcaccgatatgagagagcccacactctt
ttagctacactcagagactgga
gaattcatgagttcctcactccaacctcatgagtagttggggccatagac
tcgtgattgtacacatccaaaagaaaagaagaatattcttaagcaagact
agaaattcagagactagaaatcaaagagaactgtacacttcaacaaacaa
agaggagatctgcccagagagatggctcagtgagtaagagcacttggtgt
gttagcataagaaccagagttctttttttatatatattttttattaggta
ttttcctcatttacatttccaatgctatcccaaaagtccccaataccctc
cccccaactcccctacccacccactcccactttttggccctggcgttccc
ctgtactgggacatataaagtttacatgtccagtgggcctctctttccag
tgatggccgactaggccatcttttgatacatatgcagctagagtcaagag
ctccggggtactggttagttcataatgttgttccacctatagggttgcag
atccctttagctctttgggtactttctctagctcctccattgggggccct
gtgatccatccaatagctgactgtgagcatccacttctgtgtttgctagg
ccccagcatagtctcacaagagacagctatatcagggtcctttcagcaaa
atcttgctagtgtatggaatggtgtcatcatttggagactgattatggga
tggatccctggatatggcagtctctagatggtccatccttttgtctcagc
tccaaactttgtctctgtagctccttccatgggtgctttgttcccaattt
taagaaggggcaaagtgtctacactttggtcttcgttcttcttgagtttc
atgtgtttctcaaattgtatcttatatcttgggtattctaagtttctggg
ctatttatccacttatcagtgagtacatattgtgtgagttcctttgtgat
tgggtacctcattcagatgatgccctccaggtctaccatttgcctagaaa
tttcataattcatcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_6868358_6869490
seq2: B6Ng01-255O02.b_49_1170 (reverse)

seq1  TCCAGTCCTCTTGAGTTGTAGCTAAAAGAGGTTGTGGGCTCTCTTCATAT  50
      |||||| ||| |||| ||||||||||||||  ||||||||||| ||||||
seq2  TCCAGT-CTC-TGAG-TGTAGCTAAAAGAG--TGTGGGCTCTC-TCATAT  44

seq1  CGGTG-CTGAGGATTGAAGTGGGGTTTTCTGTGACAGCAATATAGTGAGC  99
      ||||| ||||||| || |||||||||||||||||||||||||||||||||
seq2  CGGTGCCTGAGGAATG-AGTGGGGTTTTCTGTGACAGCAATATAGTGAGC  93

seq1  TATCTCTCCAGACCCTGCATGTTATGTTTCATAGCCACCCAAATTATCTC  149
      ||||||||||||||||||||| ||||||||||||||||||||  ||||||
seq2  TATCTCTCCAGACCCTGCATG-TATGTTTCATAGCCACCCAA--TATCTC  140

seq1  TGATTATTACCTTTCCCTTCTCCATCAGTGGACAGCTTAGTCCCAGATGG  199
      ||| ||||||||||||  ||||||||||||||||||||||||||||||||
seq2  TGA-TATTACCTTTCC--TCTCCATCAGTGGACAGCTTAGTCCCAGATGG  187

seq1  TGCTCACACCATACAGCTGTAGAAC-GGTTATTCTGCAAGCAGCCTAATG  248
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCTCACACCATACAGCTGTAGAACGGGTTATTCTGCAAGCAGCCTAATG  237

seq1  ATAATCTGAGCGACACAGCCCTCACATCCAGACATCTCCCTCAATGAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGAGCGACACAGCCCTCACATCCAGACATCTCCCTCAATGAGAA  287

seq1  GTGAAGAATGCTGCAAACTCACAGCAGGTGTCTCTACCTGTGCCCTAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAATGCTGCAAACTCACAGCAGGTGTCTCTACCTGTGCCCTAGTT  337

seq1  AGCGTAGTGAGGCTGATTGTGCAGCTGCAGACTTGGGTGTGGTAGGGCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTAGTGAGGCTGATTGTGCAGCTGCAGACTTGGGTGTGGTAGGGCCC  387

seq1  AGTGATACACACAGGCCTTCCTGCTGATACTGAAACCTCTTCCAGGCTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATACACACAGGCCTTCCTGCTGATACTGAAACCTCTTCCAGGCTGG  437

seq1  TGCCTATATTTATCCAGTGCCTCTGACTAGTCACTGATGCCTGTCACCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATATTTATCCAGTGCCTCTGACTAGTCACTGATGCCTGTCACCTT  487

seq1  GTGGATTCTTTCTTTTAAGACCCATGGCACTAAAGCTTGGCCTCAGAACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATTCTTTCTTTTAAGACCCATGGCACTAAAGCTTGGCCTCAGAACC  537

seq1  AAAAATCAAAATGCATTAGTGGAGGCAGATGTGGGCTATGGCTGGATTAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAAATGCATTAGTGGAGGCAGATGTGGGCTATGGCTGGATTAT  587

seq1  ATTAAAAGCCAAACAAAGCACAACAGAGTAAGCAGGCACCACCTACTTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGCCAAACAAAGCACAACAGAGTAAGCAGGCACCACCTACTTCC  637

seq1  TTAAAGAGACTTCCCTGTGATATTGCAAGGTCCTTTAAAAGCTTCCACGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGACTTCCCTGTGATATTGCAAGGTCCTTTAAAAGCTTCCACGA  687

seq1  AGTCTTGGGTGGACAAACTATGAGACATCCAGACTCAGACAGCTCAATAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGGGTGGACAAACTATGAGACATCCAGACTCAGACAGCTCAATAC  737

seq1  AAGCATCTAGCAGGTCAATTATAACACACCATTTCCACTCTGTAATAGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTAGCAGGTCAATTATAACACACCATTTCCACTCTGTAATAGAA  787

seq1  ATTACATTCCCAGTTACCAATGAATAATCCCCTGTGGAGAGCCGTGCCGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTCCCAGTTACCAATGAATAATCCCCTGTGGAGAGCCGTGCCGT  837

seq1  GAGCAATTGCCATTATAAGATGGCGCTGGCTTCCACTGCGCCTAACTAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTGCCATTATAAGATGGCGCTGGCTTCCACTGCGCCTAACTAGT  887

seq1  AAACAAGCCTTATGCGTAAGTGCAAGAGTGAATTCACGCCCAGTCTCTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGCCTTATGCGTAAGTGCAAGAGTGAATTCACGCCCAGTCTCTGC  937

seq1  CCATCTCGGGGCGTAGTAATGGGGTGATGGGTGAACAACTAATCATGTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCGGGGCGTAGTAATGGGGTGATGGGTGAACAACTAATCATGTGC  987

seq1  TGTCACGCCACATCAGGTGCTGAAACGTCACGCTGCGGGCTATATAAGCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACGCCACATCAGGTGCTGAAACGTCACGCTGCGGGCTATATAAGCA  1037

seq1  GCACCATTTTCCGGGTTCGGGGTCTTCCTTATGTTGAAGCAATAAAAGCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATTTTCCGGGTTCGGGGTCTTCCTTATGTTGAAGCAATAAAAGCT  1087

seq1  TTGCCGTAGAAGGATCCGGTTGTCCTAGTGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  TTGCCGTAGAAGGATCCGGTTGTCCTAGTGAATTC  1122

seq1: chr10_6691723_6692381
seq2: B6Ng01-255O02.g_69_727

seq1  GAATTCATGAGTTCCTCACTCCAACCTCATGAGTAGTTGGGGCCATAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGTTCCTCACTCCAACCTCATGAGTAGTTGGGGCCATAGAC  50

seq1  TCGTGATTGTACACATCCAAAAGAAAAGAAGAATATTCTTAAGCAAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGATTGTACACATCCAAAAGAAAAGAAGAATATTCTTAAGCAAGACT  100

seq1  AGAAATTCAGAGACTAGAAATCAAAGAGAACTGTACACTTCAACAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCAGAGACTAGAAATCAAAGAGAACTGTACACTTCAACAAACAA  150

seq1  AGAGGAGATCTGCCCAGAGAGATGGCTCAGTGAGTAAGAGCACTTGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGATCTGCCCAGAGAGATGGCTCAGTGAGTAAGAGCACTTGGTGT  200

seq1  GTTAGCATAAGAACCAGAGTTCTTTTTTTATATATATTTTTTATTAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCATAAGAACCAGAGTTCTTTTTTTATATATATTTTTTATTAGGTA  250

seq1  TTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCAATACCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCAATACCCTC  300

seq1  CCCCCAACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGGCGTTCCC  350

seq1  CTGTACTGGGACATATAAAGTTTACATGTCCAGTGGGCCTCTCTTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTGGGACATATAAAGTTTACATGTCCAGTGGGCCTCTCTTTCCAG  400

seq1  TGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAG  450

seq1  CTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAG  500

seq1  ATCCCTTTAGCTCTTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTTAGCTCTTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT  550

seq1  GTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGG  600

seq1  CCCCAGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAA  650

seq1  ATCTTGCTA  659
      |||||||||
seq2  ATCTTGCTA  659