BAC Information

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BAC

Clone NameB6Ng01-255O16
Chromosome10 (Build37)
Map Location 44,452,649 - 44,453,733
singlet/doubletsinglet
Overlap gene4930431F10Rik
Upstream gene1700027J07Rik, EG668192, Qrsl1, Rtn4ip1, Aim1, LOC546475, Speer5-ps1, Atg5, LOC100041506, Prdm1, LOC546476
Downstream geneLOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255O16.bB6Ng01-255O16.g
ACCGA062008GA062009
length1,1641,083
definitionB6Ng01-255O16.b B6Ng01-255O16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatttttccaagacatttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatgtaacgagatgatcgtgtgggttttgtcttt
gagtttgtttatataatggattacattgatggatttctgtatattgaacc
atccttgcatccttgggatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcgagaactttattgagaatttttgc
attgatattcataagggaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtagttgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaaccag
gattagatctttgaaggtctgatagaactctgcactaaacccatctggtc
ctgggctgttttggttgggagactattaatgactggttctatttctttag
gggatataggactgtttagatcattaacctgatcttgatttaactttggt
acctggtatctgtctagaaacttgtccatttcatccaggttctccagttt
tgttgagtatagccttttgtagaaggatctgatggtgttttggatttctt
caggatctgttgttatgtctcccttttcatttctgattttgttaattagg
atgctttccctgtgccctctagtgagtctggctaagggtttatctatctt
gttgattttctcaaagaaccagttccttgattggttgattctttggatag
ttcttcttgtttccacttgtttgatttcacccctgagtttgattatatcc
tgttcgtctactccttcttgggtgagttttgctttccttttgttctagag
cttttaggtgtgtttgtcaagctgaattatgtgtgctctctctagtttct
ttttggatgcactcagagctatgagtttcctctaaaaatgctttcattgt
gtccataagtttgggtatgtgtgctcattttataactcaacaagttctta
attctcctccttgaccgaggtactattgagaagagggttgttcgtttcat
ggtgactgctgactttccattatttatcgtatgagatacgccttatgtcc
acggggacctcgga
gaattcacaggtatttgactccagagtgctgggattaaaggcatgtgccg
ccaccacccgcctatgtatgacccttgaaattcattttggggaaaattga
ttcattgtgaaagctagtcagtcttgaaaacaatgaaatagaatttttta
caaacgtggtcagatgcatttttaaagaactacatgtttccaagtatggc
tttgtgaaagggacaagatgcccttcttcaagcttcctgaaggatgcaga
tgataatgattgacctctcagggctgcttggcattcacagtgggctggac
gaagtgggatctactgcagatggctttcattcatgtccctgtatctacaa
ctccccaccccaagactctgagatcttacagactgttctaagccttgcct
ggccttcctagagcttttcctcaagccagcaacctcagggcttatttttc
cttcacaaaaggaagtctgctttctccagttcaggagcatttcctctcat
tctatgagagaatcaatgtgtattgctgtcccaggcagccactttcttga
gtaagtattctcaggcctgtccaggaagcttggcaggaatatttggcagc
tccctgggtttactagaaatgccagaagcccacaatttgcctagtgctaa
ttgaagtttcaccctactctccaatcctttagagcatttagaggttcgag
caacttaggaaattcttagtacagagatggcctaaggaagacactaattt
gaaaaccagcaatgaaagaagcaaaggagtccacaggtggctctactaaa
ccacaccctacaccttcaaagaaagggccctcttaaaatatcccatgttt
cacttgcccttcgactcctgcccacacagtatggcttcccaccctcacct
ccttaggcgcctgtgtaaatctccctttgcctttgggagtgttggttgcc
actggagccctcacagctgtgggtgtgtcgatctggtattctctacacct
tcaggggtgtggcagatgggcaccgtgcagttgcttccacccacttaagg
gtgtggtgctggctctactctaccacatcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_44452649_44453733
seq2: B6Ng01-255O16.g_71_1153

seq1  GAATTCACAGGTATTTGACTCCAGAGTGCTGGGATTAAAGGCATGTGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGTATTTGACTCCAGAGTGCTGGGATTAAAGGCATGTGCCG  50

seq1  CCACCACCCGCCTATGTATGACCCTTGAAATTCATTTTGGGGAAAATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCCGCCTATGTATGACCCTTGAAATTCATTTTGGGGAAAATTGA  100

seq1  TTCATTGTGAAAGCTAGTCAGTCTTGAAAACAATGAAATAGAATTTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTGAAAGCTAGTCAGTCTTGAAAACAATGAAATAGAATTTTTTA  150

seq1  CAAACGTGGTCAGATGCATTTTTAAAGAACTACATGTTTCCAAGTATGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTGGTCAGATGCATTTTTAAAGAACTACATGTTTCCAAGTATGGC  200

seq1  TTTGTGAAAGGGACAAGATGCCCTTCTTCAAGCTTCCTGAAGGATGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAAGGGACAAGATGCCCTTCTTCAAGCTTCCTGAAGGATGCAGA  250

seq1  TGATAATGATTGACCTCTCAGGGCTGCTTGGCATTCACAGTGGGCTGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATGATTGACCTCTCAGGGCTGCTTGGCATTCACAGTGGGCTGGAC  300

seq1  GAAGTGGGATCTACTGCAGATGGCTTTCATTCATGTCCCTGTATCTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGATCTACTGCAGATGGCTTTCATTCATGTCCCTGTATCTACAA  350

seq1  CTCCCCACCCCAAGACTCTGAGATCTTACAGACTGTTCTAAGCCTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACCCCAAGACTCTGAGATCTTACAGACTGTTCTAAGCCTTGCCT  400

seq1  GGCCTTCCTAGAGCTTTTCCTCAAGCCAGCAACCTCAGGGCTTATTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCCTAGAGCTTTTCCTCAAGCCAGCAACCTCAGGGCTTATTTTTC  450

seq1  CTTCACAAAAGGAAGTCTGCTTTCTCCAGTTCAGGAGCATTTCCTCTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAAAAGGAAGTCTGCTTTCTCCAGTTCAGGAGCATTTCCTCTCAT  500

seq1  TCTATGAGAGAATCAATGTGTATTGCTGTCCCAGGCAGCCACTTTCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAGAATCAATGTGTATTGCTGTCCCAGGCAGCCACTTTCTTGA  550

seq1  GTAAGTATTCTCAGGCCTGTCCAGGAAGCTTGGCAGGAATATTTGGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATTCTCAGGCCTGTCCAGGAAGCTTGGCAGGAATATTTGGCAGC  600

seq1  TCCCTGGGTTTACTAGAAATGCCAGAAGCCCACAATTTGCCTAGTGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGTTTACTAGAAATGCCAGAAGCCCACAATTTGCCTAGTGCTAA  650

seq1  TTGAAGTTTCACCCTACTCTCCAATCCTTTAGAGCATTTAGAGGTTCGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTTCACCCTACTCTCCAATCCTTTAGAGCATTTAGAGGTTCGAG  700

seq1  CAACTTAGGAAATTCTTAGTACAGAGATGGCCTAAGGAAGACACTAATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAGGAAATTCTTAGTACAGAGATGGCCTAAGGAAGACACTAATTT  750

seq1  GAAAACCAGCAATGAAAGAAGCAAAGGAGTCCACAGGTGGCTCTACTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAGCAATGAAAGAAGCAAAGGAGTCCACAGGTGGCTCTACTAAA  800

seq1  CCACACCCTACACCTTCAAAG-AAGGGCCCTCTTAAAATATCCCATGTTT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCACACCCTACACCTTCAAAGAAAGGGCCCTCTTAAAATATCCCATGTTT  850

seq1  CACTTGCCCTTCGACTCCTGCCCACACAGTATGGCTTCCCACCCTCACCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCCTTCGACTCCTGCCCACACAGTATGGCTTCCCACCCTCACCT  900

seq1  CCTTAGGCGCCTGTGTAAATCTCCCTTTGCCTTTGGGAGTGTTTGGTTGC  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTTAGGCGCCTGTGTAAATCTCCCTTTGCCTTTGGGAGTG-TTGGTTGC  949

seq1  CACT-GAGCCCTCACAGCTGTGGGTGTGTCGATCTGGTATTCTCTACACC  998
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAGCCCTCACAGCTGTGGGTGTGTCGATCTGGTATTCTCTACACC  999

seq1  -TCAGGGGTGTGGCAAGATGGGCACCCGTGCCAAGTGGCTT-CACCCACT  1046
       ||||||||||||| ||||||||| ||||||  ||| |||| ||||||||
seq2  TTCAGGGGTGTGGC-AGATGGGCA-CCGTGC--AGTTGCTTCCACCCACT  1045

seq1  TAA-GGTGTGGTGCTGGCTCTTACTCTTACCACATCTTGG  1085
      ||| |||||||||||||||| ||||| |||||||||||||
seq2  TAAGGGTGTGGTGCTGGCTC-TACTC-TACCACATCTTGG  1083