BAC Information

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BAC

Clone NameB6Ng01-256D02
Chromosome10 (Build37)
Map Location 72,873,666 - 72,874,821
singlet/doubletsinglet
Overlap geneLOC432471
Upstream geneZwint, LOC544705
Downstream geneLOC100039981, LOC623191, Pcdh15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256D02.bB6Ng01-256D02.g
ACCGA062216GA062217
length1,1881,142
definitionB6Ng01-256D02.b B6Ng01-256D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcaatgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatcttttacttccttagttagagtcacgccgagatatttttatatta
tttgtgactattgagaagggtgttgtttccctaattttttttctcagctg
tttattctttgtgtagagaaagcattgacttgtttgagtatttttattat
cagctacttcaccaaagctgttttatcaagttttaggagttcttctgggt
ggatttttaaggtccctttattatatactatcattcatcttgcaaggtga
atatttggaacttctcttttttcaaattgtgtatattt
gaattcacgaggaataggaaaagcagaatgcagagggtaactctctttta
ccttctttcacttccatgtgaatgacctgtgtcagggcattagaattcct
gtcagctggagaagaaccagcctgagctctcctgatagcatgggagcctg
aggcaagcctgaactctaacacaggcaagttttctttttatactccattt
aacacttcatttatatgcacaaactcattttagtccgcagggttaccatt
ctagaacttgccttatctggacaatacatttggagtaaatactcatgaat
ggtattctgggtaaatttggatatcagtgtctaatattgatgtggggctt
tcttcttggccacaccccctgcaattgatttattttaagaactatggtta
gggctttgcatcctgaggctatgcaagcagaggcttgttaaaatcctgca
actctgagagcaccagaggttcgcagacaccccatcacattgataggaat
gtagagtacatcagtgaagaataccttgtgggaatgagatacaacccatt
ccatagacacaaattaactgcttctgttggaagggtgtgactggagtctt
gtttttcgtttcccctggatagaactttcaggtgtgggtcagtattctca
gggttgcttaaattctcctcttctctttgcttctcaaagcaacctttgca
gctaagtagagcccccacttgaagggcttcatatttgcttccaggcattt
agcctgcttaacttgaaactcttcagaatttctgagcaagcactggttgt
gtaacactggcacccagaagatctgtgccaagtttgcttgttctattttc
tatagttgggtatattttttaaggagatatatatgtataaacattaatag
aaatgcatagatcttgatagttctgagttgagacaaagcaacgggagaga
gagagcccttgagtacacatgatgagttatctgatcctgagtctctccct
ttcatgtggctgcagtaggttctcctagcaattgcccagaccctgggttt
ctataagaccattttgatataaagaagcatgcagtagttgttctggagcc
acctgtgccattccagattaggccttaatgaattgtccaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_72873666_72874821
seq2: B6Ng01-256D02.g_63_1204 (reverse)

seq1  GGGTGGACAA-TCATTTA-GCCTAATTTTTGGAAAATGGCACA-GTGGCT  47
      |||||||||| ||||| | ||||||  | |||  ||||||||| ||||||
seq2  GGGTGGACAATTCATTAAGGCCTAA--TCTGG--AATGGCACAGGTGGCT  46

seq1  -CAGAACAACTAACTGCATGC-TCTTTATAATTCAAAATTGGGTCTTATA  95
       |||||||||| ||||||||| ||||||||  |||||||  |||||||||
seq2  CCAGAACAACT-ACTGCATGCTTCTTTATA--TCAAAAT--GGTCTTATA  91

seq1  GAAACCCAGGGTCTGGGCAATGGCTAGGGAGAACCTACTTGCAGGCCACA  145
      ||||||||||||||||||||| |||| ||||||||||| |||| ||||||
seq2  GAAACCCAGGGTCTGGGCAATTGCTA-GGAGAACCTAC-TGCA-GCCACA  138

seq1  TGGAAGGGAGAGACTTCAAGGATCAGATAACCTCATCATGGTGGTTACTC  195
      || ||||||||||||   |||||||||||| |||||||| |||  |||||
seq2  TGAAAGGGAGAGACT--CAGGATCAGATAA-CTCATCAT-GTG--TACTC  182

seq1  AAGGGCTCTCTCTCTTCCGTTGCTTTGTCTCAACTCAGAACTATCAAGAT  245
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGGCTCTCTCTCTCCCGTTGCTTTGTCTCAACTCAGAACTATCAAGAT  232

seq1  CTATGCATTTCTATTAATGTTTATACATATATATCTCCCTTAAAAAATAT  295
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTATGCATTTCTATTAATGTTTATACATATATATCT-CCTTAAAAAATAT  281

seq1  ACCCAACTATAGAAAATAGAACAAGCAAACTTGGCACAGATCTTCTGGGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACTATAGAAAATAGAACAAGCAAACTTGGCACAGATCTTCTGGGT  331

seq1  GCCAGTGTTACACAACCAGTGCTTGCTCAGAAATTCTGAAGAGTTTCAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGTTACACAACCAGTGCTTGCTCAGAAATTCTGAAGAGTTTCAAG  381

seq1  TTAAGCAGGCTAAATGCCTGGAAGCAAATATGAAGCCCTTCAAGTGGGGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAGGCTAAATGCCTGGAAGCAAATATGAAGCCCTTCAAGTGGGGG  431

seq1  CTCTACTTAGCTGCAAAGGTTGCTTTGAGAAGCAAAGAGAAGAGGAGAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTAGCTGCAAAGGTTGCTTTGAGAAGCAAAGAGAAGAGGAGAAT  481

seq1  TTAAGCAACCCTGAGAATACTGACCCACACCTGAAAGTTCTATCCAGGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAACCCTGAGAATACTGACCCACACCTGAAAGTTCTATCCAGGGG  531

seq1  AAACGAAAAACAAGACTCCAGTCACACCCTTCCAACAGAAGCAGTTAATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAAAAACAAGACTCCAGTCACACCCTTCCAACAGAAGCAGTTAATT  581

seq1  TGTGTCTATGGAATGGGTTGTATCTCATTCCCACAAGGTATTCTTCACTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATGGAATGGGTTGTATCTCATTCCCACAAGGTATTCTTCACTG  631

seq1  ATGTACTCTACATTCCTATCAATGTGATGGGGTGTCTGCGAACCTCTGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTCTACATTCCTATCAATGTGATGGGGTGTCTGCGAACCTCTGGT  681

seq1  GCTCTCAGAGTTGCAGGATTTTAACAAGCCTCTGCTTGCATAGCCTCAGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAGAGTTGCAGGATTTTAACAAGCCTCTGCTTGCATAGCCTCAGG  731

seq1  ATGCAAAGCCCTAACCATAGTTCTTAAAATAAATCAATTGCAGGGGGTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAGCCCTAACCATAGTTCTTAAAATAAATCAATTGCAGGGGGTGT  781

seq1  GGCCAAGAAGAAAGCCCCACATCAATATTAGACACTGATATCCAAATTTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAGAAAGCCCCACATCAATATTAGACACTGATATCCAAATTTA  831

seq1  CCCAGAATACCATTCATGAGTATTTACTCCAAATGTATTGTCCAGATAAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATACCATTCATGAGTATTTACTCCAAATGTATTGTCCAGATAAG  881

seq1  GCAAGTTCTAGAATGGTAACCCTGCGGACTAAAATGAGTTTGTGCATATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTCTAGAATGGTAACCCTGCGGACTAAAATGAGTTTGTGCATATA  931

seq1  AATGAAGTGTTAAATGGAGTATAAAAAGAAAACTTGCCTGTGTTAGAGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTGTTAAATGGAGTATAAAAAGAAAACTTGCCTGTGTTAGAGTT  981

seq1  CAGGCTTGCCTCAGGCTCCCATGCTATCAGGAGAGCTCAGGCTGGTTCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTGCCTCAGGCTCCCATGCTATCAGGAGAGCTCAGGCTGGTTCTT  1031

seq1  CTCCAGCTGACAGGAATTCTAATGCCCTGACACAGGTCATTCACATGGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTGACAGGAATTCTAATGCCCTGACACAGGTCATTCACATGGAA  1081

seq1  GTGAAAGAAGGTAAAAGAGAGTTACCCTCTGCATTCTGCTTTTCCTATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGAAGGTAAAAGAGAGTTACCCTCTGCATTCTGCTTTTCCTATTC  1131

seq1  CTCGTGAATTC  1156
      |||||||||||
seq2  CTCGTGAATTC  1142