BAC Information

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BAC

Clone NameB6Ng01-256F03
Chromosome10 (Build37)
Map Location 62,859,636 - 62,860,532
singlet/doubletsinglet
Overlap geneDnajc12
Upstream geneHkdc1, Supv3l1, Vps26a, Srgn, 2510003E04Rik, Ddx21, Ddx50, Stox1, Ccar1, Cxxc6, Slc25a16, Dna2l, Rufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn, 1700120B22Rik, Herc4, Sirt1
Downstream geneLOC665182, EG631906, Ctnna3, Lrrtm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256F03.bB6Ng01-256F03.g
ACCGA062310GA062311
length1,047903
definitionB6Ng01-256F03.b B6Ng01-256F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatgctttagggtaccccccaaaatgagatttaatgtataact
ttaagtctaacaataagtctaatattataacattcttagggctggagaga
ggtttcagtcagtaaagactatgctacggaagcttgagaacctgagtctg
aatcccgacagtacacggaaaagctgggtgtggctgttcatatctgcaat
cccaacactggggaagcaaccacccaagatccatggccagccaggctagc
caaggagcgagcttcaccaccacttcactaagccagcggaatcccttgtc
acattcaaaatctctgtccttatagccacagataagggtggttcccaccc
ctcatcacatctctttacagcagatggagatcattacagaaagccacagc
caatccaagtgcagacaactgtgtctcaggctcagagatcagtggggtag
ggggaagacggcaagagccaggggaaccgtgtgctgtgagattctgactc
ctagaagtgtcagagaagccacacccataaagcctcactaacatggctgc
ctaggcatgaactgaaaaaggaagacaccgatagacgggagttaacgtga
aaggagggaaactcgggggcctcaaccctagaaaaccacaggaagctcct
tagttgctgaagtcttcctcggggagagcacaccgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtcatgtctaactcgatgaaaaattgagttggaatttt
tgatgggtgtgcattgaatttatagattgcttttggcaagacgtcatttt
taactatattaatcctgatcattgatccagttcatgatcatgggagaacc
tttccatcttcctgagatctttggtttctttctttcagagactttgaagt
ttcttcttccatacagatcctttcacttgcttagttagagtccacaccaa
gttaatttttattattttgtgacaattatggaaacaggtgttgtttctca
actttctattctcagtctattttattcttgtaaataaggaaaggcac
gaattctcttaattcattttatttattgtgctcctcacccccaccccagg
gcacgtgtgaaactcagagggcagcttgcaagagccaggtatctccttcc
attatgtgtgtccaggagatcaaactcaggacgtcaggcttggtagcaaa
ggcaaagatccttactccctgacctctctcaacagctctcacttgtcttt
atgatataaccttacaaacgaggacactaaagcctgactagggagaccag
ctcaaagtctcaaagtcaaaattctggcgagagctgtcggatggttttgg
aatttaacccaccccaggagagcagtgttcatctcttgtcttgttttcca
gtggagacttttcagaaattgcagaaggcgaaggagattctgtgcaatgc
agagagtcgagcccgctatgaccattggcggaggagccagatgtcaatgc
cgttcgagcagtgggaagctttggccgactcagtgaaaactgtgagtttc
tctctggggatgctggggatttggaggccaggctgctcaagggttagact
cacgacttagcctgaagaatcaataagcaatatgagggaaaggggctgag
aaattagtggtaagtcattgtttacaaaactatgacgggctggtcagatg
gctcactggttatgagcgctgactgcccttccaaaggtcctgaattcgat
cccagcaaccacatggtggctcacaaacatcctaaacgaaatcccctctt
ctggagtgtctgacgacagctacagtgtacttactcataacacacaaact
atccaacaaatatatagttaatacaaaaaaatcctctatgatgagaaatg
tcactaagacatggtcaccagagcaaaagtctagcattgagccatggtcg
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_62859636_62860532
seq2: B6Ng01-256F03.g_65_967

seq1  GAATTCTCTTAATTCATTTTATTTATTGTGCTCCTCACCCCCACCCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATTCATTTTATTTATTGTGCTCCTCACCCCCACCCCAGG  50

seq1  GCACGTGTGAAACTCAGAGGGCAGCTTGCAAGAGCCAGGTATCTCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGTGAAACTCAGAGGGCAGCTTGCAAGAGCCAGGTATCTCCTTCC  100

seq1  ATTATGTGTGTCCAGGAGATCAAACTCAGGACGTCAGGCTTGGTAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTGTGTCCAGGAGATCAAACTCAGGACGTCAGGCTTGGTAGCAAA  150

seq1  GGCAAAGATCCTTACTCCCTGACCTCTCTCAACAGCTCTCACTTGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGATCCTTACTCCCTGACCTCTCTCAACAGCTCTCACTTGTCTTT  200

seq1  ATGATATAACCTTACAAACGAGGACACTAAAGCCTGACTAGGGAGACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAACCTTACAAACGAGGACACTAAAGCCTGACTAGGGAGACCAG  250

seq1  CTCAAAGTCTCAAAGTCAAAATTCTGGCGAGAGCTGTCGGATGGTTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTCTCAAAGTCAAAATTCTGGCGAGAGCTGTCGGATGGTTTTGG  300

seq1  AATTTAACCCACCCCAGGAGAGCAGTGTTCATCTCTTGTCTTGTTTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACCCACCCCAGGAGAGCAGTGTTCATCTCTTGTCTTGTTTTCCA  350

seq1  GTGGAGACTTTTCAGAAATTGCAGAAGGCGAAGGAGATTCTGTGCAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACTTTTCAGAAATTGCAGAAGGCGAAGGAGATTCTGTGCAATGC  400

seq1  AGAGAGTCGAGCCCGCTATGACCATTGGCGGAGGAGCCAGATGTCAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCGAGCCCGCTATGACCATTGGCGGAGGAGCCAGATGTCAATGC  450

seq1  CGTTCGAGCAGTGGGAAGCTTTGGCCGACTCAGTGAAAACTGTGAGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCGAGCAGTGGGAAGCTTTGGCCGACTCAGTGAAAACTGTGAGTTTC  500

seq1  TCTCTGGGGATGCTGGGGATTTGGAGGCCAGGCTGCTCAAGGGTTAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGGATGCTGGGGATTTGGAGGCCAGGCTGCTCAAGGGTTAGACT  550

seq1  CACGACTTAGCCTGAAGAATCAGTAAGCAATAGGAGGGAAAGGGGCTGAG  600
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  CACGACTTAGCCTGAAGAATCAATAAGCAATATGAGGGAAAGGGGCTGAG  600

seq1  AAATTAGTGGTAAGTCATTGTTTACAAAACTATGAGGGGCTGGTCAGATG  650
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAATTAGTGGTAAGTCATTGTTTACAAAACTATGACGGGCTGGTCAGATG  650

seq1  GCTCAGTGGTTAAGAGCGCTGACTGCCCTTCCAAAGGTCCTGAATTCAAA  700
      ||||| |||||| ||||||||||||||||||||||||||||||||||  |
seq2  GCTCACTGGTTATGAGCGCTGACTGCCCTTCCAAAGGTCCTGAATTC-GA  699

seq1  TCCCAGCAACCACATGGTGGCTCACAAACATCCGAAACGAAAT-CCCTCT  749
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  TCCCAGCAACCACATGGTGGCTCACAAACATCCTAAACGAAATCCCCTCT  749

seq1  TCTGGAGTGTCTGAAGACAGCTACAGTGTACTTACACATAACAAACAAAC  799
      |||||||||||||| |||||||||||||||||||| ||||||| ||||||
seq2  TCTGGAGTGTCTGACGACAGCTACAGTGTACTTACTCATAACACACAAAC  799

seq1  AAACAAACAAATAAATAGTTA--AAAAAAAAAACCTCAATGAGGAGAAA-  846
       | | |||||||| |||||||  | ||||||| |||| |||| |||||| 
seq2  TATCCAACAAATATATAGTTAATACAAAAAAATCCTCTATGATGAGAAAT  849

seq1  GTCA-GAAGACA-GGTCACCAGAGCAAGAGTTTAG-AAGGAGCCATGGCC  893
      ||||  |||||| |||||||||||||| ||| ||| |  ||||||||| |
seq2  GTCACTAAGACATGGTCACCAGAGCAAAAGTCTAGCATTGAGCCATGGTC  899

seq1  GCTT  897
      ||||
seq2  GCTT  903