BAC Information

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BAC

Clone NameB6Ng01-256I01
Chromosome10 (Build37)
Map Location 36,191,650 - 36,192,767
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041585, LOC667860
Downstream geneHs3st5, Hdac2, Marcks, LOC100040846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256I01.bB6Ng01-256I01.g
ACCGA062445GA062446
length1,1071,160
definitionB6Ng01-256I01.b B6Ng01-256I01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaccaagagatccaggctgtgtagggaggtgagggagcacga
agcaaactttagtgaagcatttctaggaaggaaataatgcttctagacgt
gtgtttcaaagcccattccatatggcattaaataataatttttaagaagc
cccaaaaatgtatcatcactctgaaatattggattgctttaatgctggat
tttgcacctgatatatatatgagggttttttttttctgtttaaatacgtt
ggctgctaaagtgctatgacaaaacagcaagacacatgagcacaccaaag
tcaacgaaacaccaacctaatgacttcaccatagtccctcaggtctctca
aaaagattttcaaatcttcatcatagtgaccattttatatttacatttta
aattgttctgaggatgtcttagactaatagaatggatgaaacaactattg
aaaatacatgtcccaccattttcaatgttttggtaatctgtacattagtt
ttctaattcatatttccttctaagcatctgcttttctatggacatttgta
ctctgttgtgttttaatattttattctaactttggctaaattagtatatt
taattaagtatctccacaaatctaaaatataaggatggaaaatttctaag
ctgatgtcaatgtgccaaattaatggtacttgtgctatgtggttagaact
cagcagtagactcctctctggttacagaccttcagtgaagagggctctag
gggtctgacaatgctggcatcatgatatactcctgctacatgggcaaagc
aggcaggcaaagcatagttctcagcacacataaaggaaagatttatagac
atggcaagagagcattctgcctgttcccttctttaaataattatgacttt
ccatgaatctctttctaaatcaactacagatgacaaatatctgggcaaag
aaagccacaaaatatcacttacagtagcactatgagtttaagaaatacag
tattgatcctcgtgtacttctgcatatgatcatatgtggatgcaccccaa
cctctccacacacatataatttcttcccaatatccatacgaaggagctta
gagcctc
gaattctcttagaggctagaaaaatagcccgaaagccaacgggcggtcta
cacagctacaaaatgagatcgacatgggattccctttgacttgccccagt
tgggactgcaacatggctaaaggtagggagagcttgaaaatctcgccagg
ctctggtctccaaggtgcctcaagacagcccactaatttggctaaggtaa
gaggtaatgcaggggccaatcgaacctccctcagtgttccttaaaaggct
tatggaagccttcaggaggttcactccctttgatcttacctcagaagccc
agaaggcctcagtggccatggcctttcataaggcagtcagctccagatat
cagaaagaaacgtcagagattggaaggtgtattacaagagggagacagtt
actccatctagtgaaagaggtagagaaagtgtgtgagagagaggcgggag
gcaaaagaaagagaaaacaggagagatcgtagacaagaaagaaatttgcc
acagtggtaggagaaaaagaaaagacaggatctagataggaaacctgggc
aactgaagaccgagcctcagctaaagaggctcagctgtgtcagactcaag
ttatctatttgagatacacccttcaaggtggaaaacagtggctaaaagaa
accagaaaaagactgtaactacaccaaggtaagtaagaaaattcttgggc
accgctggtttctgcaggctctggatacctgggttggtgactttagctgc
ccgttgtaccccctaaccaaggaagggaaagtgtctgtgtggatcccaga
tcaccagaaagcctttaagaaaatgaaaaaggccctactgatggccagcc
tttgcctgacctaaccaagcccttcactctttatgtaaaagagagagcag
ggtcgccagaggagtcctttactcagactttgggactttgaaaaaggcca
gtggctttaccttatccaagaagttacacccctgtgccagccgttggttt
tcttgccttaaaagctattgctgccattaacactgcttgtcagaatgctg
attagctcactctggacagcaaatagctgtagtgcaacccacactcttga
aagcatatccaagcttctgactgatggatgacgaaccaaatgctctcgtg
tgtggaaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_36191650_36192767
seq2: B6Ng01-256I01.b_45_1151

seq1  GAATTCCTAACCAAGAGATCCAGGCTGTGTAGGGAGGTGAGGGAGCACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACCAAGAGATCCAGGCTGTGTAGGGAGGTGAGGGAGCACGA  50

seq1  AGCAAACTTTAGTGAAGCATTTCTAGGAAGGAAATAATGCTTCTAGACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACTTTAGTGAAGCATTTCTAGGAAGGAAATAATGCTTCTAGACGT  100

seq1  GTGTTTCAAAGCCCATTCCATATGGCATTAAATAATAATTTTTAAGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCAAAGCCCATTCCATATGGCATTAAATAATAATTTTTAAGAAGC  150

seq1  CCCAAAAATGTATCATCACTCTGAAATATTGGATTGCTTTAATGCTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAATGTATCATCACTCTGAAATATTGGATTGCTTTAATGCTGGAT  200

seq1  TTTGCACCTGATATATATATGAGGGTTTTTTTTTTCTGTTTAAATACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACCTGATATATATATGAGGGTTTTTTTTTTCTGTTTAAATACGTT  250

seq1  GGCTGCTAAAGTGCTATGACAAAACAGCAAGACACATGAGCACACCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTAAAGTGCTATGACAAAACAGCAAGACACATGAGCACACCAAAG  300

seq1  TCAACGAAACACCAACCTAATGACTTCACCATAGTCCCTCAGGTCTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGAAACACCAACCTAATGACTTCACCATAGTCCCTCAGGTCTCTCA  350

seq1  AAAAGATTTTCAAATCTTCATCATAGTGACCATTTTATATTTACATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATTTTCAAATCTTCATCATAGTGACCATTTTATATTTACATTTTA  400

seq1  AATTGTTCTGAGGATGTCTTAGACTAATAGAATGGATGAAACAACTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTCTGAGGATGTCTTAGACTAATAGAATGGATGAAACAACTATTG  450

seq1  AAAATACATGTCCCACCATTTTCAATGTTTTGGTAATCTGTACATTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATGTCCCACCATTTTCAATGTTTTGGTAATCTGTACATTAGTT  500

seq1  TTCTAATTCATATTTCCTTCTAAGCATCTGCTTTTCTATGGACATTTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTCATATTTCCTTCTAAGCATCTGCTTTTCTATGGACATTTGTA  550

seq1  CTCTGTTGTGTTTTAATATTTTATTCTAACTTTGGCTAAATTAGTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGTGTTTTAATATTTTATTCTAACTTTGGCTAAATTAGTATATT  600

seq1  TAATTAAGTATCTCCACAAATCTAAAATATAAGGATGGAAAATTTCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGTATCTCCACAAATCTAAAATATAAGGATGGAAAATTTCTAAG  650

seq1  CTGATGTCAATGTGCCAAATTAATGGTACTTGTGCTATGTGGTTAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTCAATGTGCCAAATTAATGGTACTTGTGCTATGTGGTTAGAACT  700

seq1  CAGCAGTAGACTCCTCTCTGGTTACAGACCTTCAGTGAAGAGGGCTCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAGACTCCTCTCTGGTTACAGACCTTCAGTGAAGAGGGCTCTAG  750

seq1  GGGTCTGACAATGCTGGCATCATGATATACTCCTGCTACATGGGCAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGACAATGCTGGCATCATGATATACTCCTGCTACATGGGCAAAGC  800

seq1  AGGCAGGCAAAGCATAGTTCTCAGCACACAT-AAGGAAAGATTTATAGAC  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGCAGGCAAAGCATAGTTCTCAGCACACATAAAGGAAAGATTTATAGAC  850

seq1  ATGGCAAGAGAGCATTCTGCCTGTTCCCTTCTTTAAATAATTATGACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAGAGAGCATTCTGCCTGTTCCCTTCTTTAAATAATTATGACTTT  900

seq1  CCATGAATCTCTTTCTAAATCAACTACAGAATGACAAATATCTGGGCAAA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCATGAATCTCTTTCTAAATCAACTACAG-ATGACAAATATCTGGGCAAA  949

seq1  GAAAAGGCCACAAAAATATCACTTACAGTAAGCACTATTGAGGTTTTAGA  999
      ||||  ||||| ||||||||||||||||| ||||||| ||| |||| |||
seq2  GAAA--GCCAC-AAAATATCACTTACAGT-AGCACTA-TGA-GTTTAAGA  993

seq1  AATACAGTATTGAATCCTCCGTGTACTTTCTGCATATGATTCATTATGTG  1049
      |||||||||||| ||||| ||||||| |||||||||||| ||| ||||| 
seq2  AATACAGTATTG-ATCCT-CGTGTAC-TTCTGCATATGA-TCA-TATGT-  1037

seq1  GGATGCACCCC-ACCTCTCCACACACCATAT-ATTTC-TCCCATTAT-CA  1095
      ||||||||||| ||||||||||||| ||||| ||||| ||||| ||| ||
seq2  GGATGCACCCCAACCTCTCCACACA-CATATAATTTCTTCCCAATATCCA  1086

seq1  TACAGAGAGGAGTTTAGAGCCTC  1118
      ||| || ||||| ||||||||||
seq2  TAC-GA-AGGAGCTTAGAGCCTC  1107