BAC Information

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BAC

Clone NameB6Ng01-257A22
Chromosome10 (Build37)
Map Location 113,082,508 - 113,191,388
singlet/doubletdoublet
Overlap geneLOC100042666
Upstream geneLOC100042639, 4921506J03Rik, LOC100042655
Downstream geneTrhde
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A22.bB6Ng01-257A22.g
ACCGA062853GA062854
length1,1781,000
definitionB6Ng01-257A22.b B6Ng01-257A22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,190,211 - 113,191,388)(113,082,508 - 113,083,491)
sequence
gaattcaactaccttaaaactaacatgttctctcagttctactttcaaat
gacaaattggttggtgtgtgtgtcttttgctttgctggtttatgacctca
ttgttttccaaatagtattcctttcacacttgtagctaatatggatcttt
gactaaatacactgagaatactttattcacttttatatgtgaatgttagt
gattttcaggggtcccccctccattggatatttactcgtatttgcaactg
caaattcaagtttgtttggctctagaaggatatttcacaaagttgggatt
atttaagtcgaaagagctcaaaagtcacaactcactgaaatgaaaatgaa
atattagttgttcagggtttcttattcctccagctacttctccctgctat
gcaagtctatgtggcttgtttcttccaatggcaaatatcattttagctaa
aaaataaagagtaggagcgaataaaacatatataatttttcaaggagtgc
tcatttcactcctcaaactactaataaaatcaggattagattttaggcct
ggcttcccttaaatatattgtgactgttgactttactctagtaaaaactt
ttgatggtgcaataaaattagatgtactcagaggctagaacaagaagtga
tgtttttaaataaagaaaatatagctctaaagttaccaaactttaatact
agaaaagtcttcagctagaaaaacataatatctacttaaataactatagt
ctgaacagaggtatatgtcctgtctgagctgtatggcaacctgtgttggg
aaagagattcaatgtgagatttaaaaaccttttcaataaaacgtaagaga
gagagggaaaaaaactcatgtaatcacacaattggaacagtgtgggttac
cctctacctgcttttaatgcagccttagttattacaacttccccaatcag
tctggcattaatcatgggacttaattttagaaagatgtacttgttaaatg
atatgaagtccaatttaatgtctacattgccctagaagacatacaatagg
taagaataaaatcccagtcctcaaatagagtttattatgaaaacttcata
taagaacatttttttgagagcatataaaattggcatgttcaagtctcaaa
cagtttataacacccaactgaatttcta

gaattcatttatcagttccaatctttttttcagagtcatatatattttca
tgcaatcctaaaacagtgacagtttgacttctactttcccagtatgaagg
acatttattccttttgtcactctgtctgcagtaatatggaattaaactgt
gatgacaaaaattaacatctttgttttttaatatgtaattttctttgtta
cttttctatttctgtgataagatgccaggacaaagagagcttccagttga
tttgggaacatatactttcagatgcttaatgtccatgaccatcatgacta
agaacttgccagctgtcagacaggcatggccttggagcagtagctaagag
tttatttcataatctacaaacactaagcagaaaaaattaactgggaatgc
tatgagattttgaaacatcaatgaccactctcacctctttttacaaggcc
acaccttaaatggaatttaaagttttctttaaccctggcctttgtagttt
tgaagaatttgcctctattattattattatggtttcccagttgttatcaa
gaaaggaattggattttatcaaatactttttaagcatctattgaaataac
catggctttgtcttccattcagcagatattatttataaaatttatggatt
catatttggtatggataccacttgatcgtagtaattaatgtttatactgt
atgattagatttgatttgctaatatagtgtagtcaaatatttgtatattt
agtcatctgtgacaatgtactacatatttctgtttctcctgtttgtttgt
tttttgtcaacttgacacaggggatggaaaataaattgagcgaatacttc
ctacaattgtacttaatttatgattgatttgggagaacccagcccaccag
gagaacacctatatcagatttgcttgactgatgattggtgtggtaggagc
cagtcctcctggcatgctgctactcatctggatgatatgagattagggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_113190211_113191388
seq2: B6Ng01-257A22.b_46_1223 (reverse)

seq1  TAGAAATACA-TTTGGTGTTATAAAACTTGTTTGAAGACTTTGGAACATG  49
      ||||||| || || |||||||||||   |||||| ||||||  |||||||
seq2  TAGAAATTCAGTTGGGTGTTATAAA--CTGTTTG-AGACTT--GAACATG  45

seq1  -CAATTTTATAATGCTCTTCAAAAAATG-TCTTATATGAAAGTTTTCATA  97
       ||||||||| |||||||  |||||||| ||||||||| |||||||||||
seq2  CCAATTTTAT-ATGCTCTCAAAAAAATGTTCTTATATG-AAGTTTTCATA  93

seq1  ATAAACTCTAATTGA-GACT-GGATTTTATTC-TACCTA-TGTATGTCTT  143
      |||||||||| |||| |||| ||||||||||| |||||| ||||||||||
seq2  ATAAACTCTATTTGAGGACTGGGATTTTATTCTTACCTATTGTATGTCTT  143

seq1  CTA-GGCAATGTAGAACATTAAATTGGACTTCATATCATTTAACAAGTAC  192
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTAGGGCAATGTAG-ACATTAAATTGGACTTCATATCATTTAACAAGTAC  192

seq1  ATCTTTTCTAAAATTAAGT-CCATGATTAATGCCAGACTGATTGGGGAAG  241
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATC-TTTCTAAAATTAAGTCCCATGATTAATGCCAGACTGATTGGGGAAG  241

seq1  TTGTAATAACTAAGGCTGCATTAAAAGCAGGTAGAGGGTAACCCACACTG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATAACTAAGGCTGCATTAAAAGCAGGTAGAGGGTAACCCACACTG  291

seq1  TTCCAATTGTGTGATTACATGAGTTTTTTTCCCTCTCTCTCTTACGTTTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGTGTGATTACATGAGTTTTTTTCCCTCTCTCTCTTACGTTTT  341

seq1  ATTGAAAAGGTTTTTAAATCTCACATTGAATCTCTTTCCCAACACAGGTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAAGGTTTTTAAATCTCACATTGAATCTCTTTCCCAACACAGGTT  391

seq1  GCCATACAGCTCAGACAGGACATATACCTCTGTTCAGACTATAGTTATTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATACAGCTCAGACAGGACATATACCTCTGTTCAGACTATAGTTATTT  441

seq1  AAGTAGATATTATGTTTTTCTAGCTGAAGACTTTTCTAGTATTAAAGTTT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATATTATGTTTTTCTAGCTGAAGACTTTTCTAGTATTAAAGTTT  491

seq1  GGTAACTTTAGAGCTATATTTTCTTTATTTAAAAACATCACTTCTTGTTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTTTAGAGCTATATTTTCTTTATTTAAAAACATCACTTCTTGTTC  541

seq1  TAGCCTCTGAGTACATCTAATTTTATTGCACCATCAAAAGTTTTTACTAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTGAGTACATCTAATTTTATTGCACCATCAAAAGTTTTTACTAG  591

seq1  AGTAAAGTCAACAGTCACAATATATTTAAGGGAAGCCAGGCCTAAAATCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGTCAACAGTCACAATATATTTAAGGGAAGCCAGGCCTAAAATCT  641

seq1  AATCCTGATTTTATTAGTAGTTTGAGGAGTGAAATGAGCACTCCTTGAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGATTTTATTAGTAGTTTGAGGAGTGAAATGAGCACTCCTTGAAA  691

seq1  AATTATATATGTTTTATTCGCTCCTACTCTTTATTTTTTAGCTAAAATGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATATGTTTTATTCGCTCCTACTCTTTATTTTTTAGCTAAAATGA  741

seq1  TATTTGCCATTGGAAGAAACAAGCCACATAGACTTGCATAGCAGGGAGAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCCATTGGAAGAAACAAGCCACATAGACTTGCATAGCAGGGAGAA  791

seq1  GTAGCTGGAGGAATAAGAAACCCTGAACAACTAATATTTCATTTTCATTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGGAGGAATAAGAAACCCTGAACAACTAATATTTCATTTTCATTT  841

seq1  CAGTGAGTTGTGACTTTTGAGCTCTTTCGACTTAAATAATCCCAACTTTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTTGTGACTTTTGAGCTCTTTCGACTTAAATAATCCCAACTTTG  891

seq1  TGAAATATCCTTCTAGAGCCAAACAAACTTGAATTTGCAGTTGCAAATAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATCCTTCTAGAGCCAAACAAACTTGAATTTGCAGTTGCAAATAC  941

seq1  GAGTAAATATCCAATGGAGGGGGGACCCCTGAAAATCACTAACATTCACA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATATCCAATGGAGGGGGGACCCCTGAAAATCACTAACATTCACA  991

seq1  TATAAAAGTGAATAAAGTATTCTCAGTGTATTTAGTCAAAGATCCATATT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGTGAATAAAGTATTCTCAGTGTATTTAGTCAAAGATCCATATT  1041

seq1  AGCTACAAGTGTGAAAGGAATACTATTTGGAAAACAATGAGGTCATAAAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAAGTGTGAAAGGAATACTATTTGGAAAACAATGAGGTCATAAAC  1091

seq1  CAGCAAAGCAAAAGACACACACACCAACCAATTTGTCATTTGAAAGTAGA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGCAAAAGACACACACACCAACCAATTTGTCATTTGAAAGTAGA  1141

seq1  ACTGAGAGAACATGTTAGTTTTAAGGTAGTTGAATTC  1178
      |||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGAACATGTTAGTTTTAAGGTAGTTGAATTC  1178


seq1: chr10_113082508_113083491
seq2: B6Ng01-257A22.g_64_1046

seq1  GAATTCATTTATCAGTTCCAATCTTTTTTTCAGAGTCATATATATTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATCAGTTCCAATCTTTTTTTCAGAGTCATATATATTTTCA  50

seq1  TGCAATCCTAAAACAGTGACAGTTTGACTTCTACTTTCCCAGTATGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCTAAAACAGTGACAGTTTGACTTCTACTTTCCCAGTATGAAGG  100

seq1  ACATTTATTCCTTTTGTCACTCTGTCTGCAGTAATATGGAATTAAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTCCTTTTGTCACTCTGTCTGCAGTAATATGGAATTAAACTGT  150

seq1  GATGACAAAAATTAACATCTTTGTTTTTTAATATGTAATTTTCTTTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAAAAATTAACATCTTTGTTTTTTAATATGTAATTTTCTTTGTTA  200

seq1  CTTTTCTATTTCTGTGATAAGATGCCAGGACAAAGAGAGCTTCCAGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTATTTCTGTGATAAGATGCCAGGACAAAGAGAGCTTCCAGTTGA  250

seq1  TTTGGGAACATATACTTTCAGATGCTTAATGTCCATGACCATCATGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACATATACTTTCAGATGCTTAATGTCCATGACCATCATGACTA  300

seq1  AGAACTTGCCAGCTGTCAGACAGGCATGGCCTTGGAGCAGTAGCTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTGCCAGCTGTCAGACAGGCATGGCCTTGGAGCAGTAGCTAAGAG  350

seq1  TTTATTTCATAATCTACAAACACTAAGCAGAAAAAATTAACTGGGAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATAATCTACAAACACTAAGCAGAAAAAATTAACTGGGAATGC  400

seq1  TATGAGATTTTGAAACATCAATGACCACTCTCACCTCTTTTTACAAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGATTTTGAAACATCAATGACCACTCTCACCTCTTTTTACAAGGCC  450

seq1  ACACCTTAAATGGAATTTAAAGTTTTCTTTAACCCTGGCCTTTGTAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTAAATGGAATTTAAAGTTTTCTTTAACCCTGGCCTTTGTAGTTT  500

seq1  TGAAGAATTTGCCTCTATTATTATTATTATGGTTTCCCAGTTGTTATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATTTGCCTCTATTATTATTATTATGGTTTCCCAGTTGTTATCAA  550

seq1  GAAAGGAATTGGATTTTATCAAATACTTTTTAAGCATCTATTGAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAATTGGATTTTATCAAATACTTTTTAAGCATCTATTGAAATAAC  600

seq1  CATGGCTTTGTCTTCCATTCAGCAGATATTATTTATAAAATTTATGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTTTGTCTTCCATTCAGCAGATATTATTTATAAAATTTATGGATT  650

seq1  CATATTTGGTATGGATACCACTTGATCGTAGTAATTAATGTTTATACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGGTATGGATACCACTTGATCGTAGTAATTAATGTTTATACTGT  700

seq1  ATGATTAGATTTGATTTGCTAATATAGTGTAGTCAAATATTTGTATATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAGATTTGATTTGCTAATATAGTGTAGTCAAATATTTGTATATTT  750

seq1  AGTCATCTGTGACAATGTACTACATATTTCTGTTTCTCCTGTTTGTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCTGTGACAATGTACTACATATTTCTGTTTCTCCTGTTTGTTTGT  800

seq1  TTTTTGTCAACTTGACACAGGGGATGGAAAATAAATTGAGCGAATACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCAACTTGACACAGGGGATGGAAAATAAATTGAGCGAATACTTC  850

seq1  CTACAATTGTACTTAATTTATGATTGATTTGGGAGAACCCAGCCCACCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATTGTACTTAATTTATGATTGATTTGGGAGAACCCAGCCCACCAG  900

seq1  GAGAACACCTATATCAGATTTGCTTGACTGATGATTGGTGTGGTAGGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACACCTATATCAGATTTGCTTGACTGATGATTGGTGTGGTAGGAGC  950

seq1  CAGTCCTCCTGGCATGCTGCTACTCATCTTGGAT  984
      |||||||||||||||||||||||||||| |||||
seq2  CAGTCCTCCTGGCATGCTGCTACTCATC-TGGAT  983


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