BAC Information

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BAC

Clone NameB6Ng01-258D02
Chromosome10 (Build37)
Map Location 30,936,076 - 31,066,127
singlet/doubletdoublet
Overlap geneEG432448, Hddc2, Tpd52l1
Upstream geneLOC212815, Trmt11, Hint3, Ncoa7, LOC382354, Hey2, LOC654431
Downstream geneLOC100041294, Ibrdc1, LOC666055, LOC667752, LOC100040638, Tcba1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258D02.bB6Ng01-258D02.g
ACCGA063693GA063694
length1,1791,154
definitionB6Ng01-258D02.b B6Ng01-258D02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,064,944 - 31,066,127)(30,936,076 - 30,937,250)
sequence
gaattcattttgtttcatagtttgaaggtgtagtctatccccatcaggaa
gtcatggcggcagcggtacgggtttgaggcagctggtctcaaggcaactg
tagtcagggagcggagagctgtgaatgccaaagctctccttttagtcctg
gagcccatgggctagtgaatagaaacagccttctagatgcaaccagagac
acagtaatccagacacattccatagtaattctaaatctaatcaaattgac
aatacatattaagcatcatatctcttaatttaaatgatacaggaaaatat
tccgtgggatatgttctggtaaattattataggttacattttttattcaa
ccatctggcttatttcatattataaaatggtattatttgtcttatacttc
tggtagttttctttctttcctttaccagaataccaagatatattaatcat
ttttacaccttcatgcttaataactgaatcatcatatatgtcataacagc
agtaaaaactttaagtaactaccctccatgggacatttgccagtttacag
agcagtaaggaggactacaccgaacatccttactgtagaacaagggaagc
ctgttgtataggatatttttacttttttatattatatgtatgggaaaggt
ttcacaatattattactgttctatttgtattgtttaaatgcctgttgact
tgtttggaatttgactgatgtggcttaggtgatccttctttagaaatcaa
ttttatttttctcttagaccaattttttttttcccagagaaaaggttgct
ctgtatatccctgcatgttctggaactcattctgtagaccagactggcct
cagactcagagatccacctgtctctgcctcctaagtgctgggattaaagt
catgtaccaccagtgcccaggccaaattatttttttttaagttggaaagt
ttacgtttctcctcttaaaagtttatgtcataaatttcttaaactattat
ttctttgaagctttgatacctagaaacaaatattcatgtctttgttattt
agtgtttttacatcaaggtgttgggtatgcatcatagtcagaacaattta
agtgaagtatcatgcggatagttaattacaggtatgattgtgaacctctc
catgtgtttgcttcatttttatgaatacc

gaattcaatccccaagactcacaagaaagacagtcaactctcactgactt
ttttttttctgacctccacatacacaccatggcacacccacccatgtaca
atgaatataataaatgtaactctttaaattggacttatgggaacccattt
atgagtggggtgagtagcccagatgcataattccttaaggcagtgtggac
tgagaaacaggaagcataaggctgcatggccaccgggaaggaaaagctgt
atttctgcacttcacattgggtttcatagagccaaatcaaagttcagtag
cacagactttgtgttgctccctaccagtctattagtgaacttgagacaaa
ttgtcagtttccattgctaccagtgaaacagggacaaggggcagtataca
aagaaagcaacaagacaagcataggtcctggtgtggagcaaatgcaaatc
aaatgccttttctgccattttttcggtgatgttagtagtttatttaaatg
ttcttctagatatttattaccagaattcactctgggactaagcactcagt
atgtaatatgggactcagaatattttaaaataataggtctatttcatgca
atgtttagttatggctctgccaatctccatttgattccttttatcaatct
tttggcatttgggaataaaagacactatgctgctgttttcctcttctgca
gtgcaaaatcttgaaggagccacccagtgtgcctctcagctgtagtgtgc
tttgattaaaatacacgcacactaggaacataaggtcactgcgaccagct
gaaggaaatgtatttggcaactggatttccagaaagtgtttcctatgagc
ttgcctctctcattccagatgttagtatctttgactgactgccatggcta
gaaaaggcctttataaaagactgccccaggaaaggagtaatatatctgag
cttgaatttcatgttttagcgagatagcatgatgttgttggcacgatggt
gtctgtgtagagcagaagtcatgatgaccatgctgctggagagcactcta
agctcttgtctgtagcatgggctctctgctcatggatctactgtgatttg
taagtgttcttcttggcaaatgttcttgagaacattgcacatcagttgcc
ttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_31064944_31066127
seq2: B6Ng01-258D02.b_44_1222 (reverse)

seq1  GGTATTCATAAAAATGAAGACAAAACACTGGAGAGTGTCCACATCCATAC  50
      |||||||||||||||||||  || ||| ||||||| || ||||  |||||
seq2  GGTATTCATAAAAATGAAGCAAACACA-TGGAGAG-GTTCACAATCATAC  48

seq1  CTGTAATTAACTATCCGCATGAATACTTCACTAAAATGGTTCCTGACTAT  100
      ||||||||||||||||||||| |||||||||| |||| ||| ||||||||
seq2  CTGTAATTAACTATCCGCATG-ATACTTCACTTAAATTGTT-CTGACTAT  96

seq1  GATGCATAACCCAACCACCTTTGATGT-AAAACACTAAAT-ACAAAGACA  148
      ||||||| |||||| |||| ||||||| |||||||||||| |||||||||
seq2  GATGCAT-ACCCAA-CACC-TTGATGTAAAAACACTAAATAACAAAGACA  143

seq1  TGAATATTTGTTTCTAGGTATCAAAGCTTCAAAGAAATAATAGTTTAAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTGTTTCTAGGTATCAAAGCTTCAAAGAAATAATAGTTTAAGA  193

seq1  AATTTATGACATAAACTTTTAAGAGGAGAAACGTAAAACTTTCCAACTT-  247
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  AATTTATGACATAAACTTTTAAGAGGAGAAACGT-AAACTTTCCAACTTA  242

seq1  AAAAAAAATAATTTGGCCTGGGCACTGGTGGTACATGACTTTAATCCCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATAATTTGGCCTGGGCACTGGTGGTACATGACTTTAATCCCAG  292

seq1  CACTTAGGAGGCAGAGACAGGTGGATCTCTGAGTCTGAGGCCAGTCTGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGGAGGCAGAGACAGGTGGATCTCTGAGTCTGAGGCCAGTCTGGT  342

seq1  CTACAGAATGAGTTCCAGAACATGCAGGGATATACAGAGCAACCTTTTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAATGAGTTCCAGAACATGCAGGGATATACAGAGCAACCTTTTCT  392

seq1  CTGGGAAAAAAAAAATTGGTCTAAGAGAAAAATAAAATTGATTTCTAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAAAAAAAAATTGGTCTAAGAGAAAAATAAAATTGATTTCTAAAG  442

seq1  AAGGATCACCTAAGCCACATCAGTCAAATTCCAAACAAGTCAACAGGCAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCACCTAAGCCACATCAGTCAAATTCCAAACAAGTCAACAGGCAT  492

seq1  TTAAACAATACAAATAGAACAGTAATAATATTGTGAAACCTTTCCCATAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAATACAAATAGAACAGTAATAATATTGTGAAACCTTTCCCATAC  542

seq1  ATATAATATAAAAAAGTAAAAATATCCTATACAACAGGCTTCCCTTGTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATAAAAAAGTAAAAATATCCTATACAACAGGCTTCCCTTGTTC  592

seq1  TACAGTAAGGATGTTCGGTGTAGTCCTCCTTACTGCTCTGTAAACTGGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAGGATGTTCGGTGTAGTCCTCCTTACTGCTCTGTAAACTGGCA  642

seq1  AATGTCCCATGGAGGGTAGTTACTTAAAGTTTTTACTGCTGTTATGACAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCCATGGAGGGTAGTTACTTAAAGTTTTTACTGCTGTTATGACAT  692

seq1  ATATGATGATTCAGTTATTAAGCATGAAGGTGTAAAAATGATTAATATAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGATTCAGTTATTAAGCATGAAGGTGTAAAAATGATTAATATAT  742

seq1  CTTGGTATTCTGGTAAAGGAAAGAAAGAAAACTACCAGAAGTATAAGACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTATTCTGGTAAAGGAAAGAAAGAAAACTACCAGAAGTATAAGACA  792

seq1  AATAATACCATTTTATAATATGAAATAAGCCAGATGGTTGAATAAAAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATACCATTTTATAATATGAAATAAGCCAGATGGTTGAATAAAAAAT  842

seq1  GTAACCTATAATAATTTACCAGAACATATCCCACGGAATATTTTCCTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCTATAATAATTTACCAGAACATATCCCACGGAATATTTTCCTGTA  892

seq1  TCATTTAAATTAAGAGATATGATGCTTAATATGTATTGTCAATTTGATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAAATTAAGAGATATGATGCTTAATATGTATTGTCAATTTGATTA  942

seq1  GATTTAGAATTACTATGGAATGTGTCTGGATTACTGTGTCTCTGGTTGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAATTACTATGGAATGTGTCTGGATTACTGTGTCTCTGGTTGCA  992

seq1  TCTAGAAGGCTGTTTCTATTCACTAGCCCATGGGCTCCAGGACTAAAAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAGGCTGTTTCTATTCACTAGCCCATGGGCTCCAGGACTAAAAGG  1042

seq1  AGAGCTTTGGCATTCACAGCTCTCCGCTCCCTGACTACAGTTGCCTTGAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTGGCATTCACAGCTCTCCGCTCCCTGACTACAGTTGCCTTGAG  1092

seq1  ACCAGCTGCCTCAAACCCGTACCGCTGCCGCCATGACTTCCTGATGGGGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTGCCTCAAACCCGTACCGCTGCCGCCATGACTTCCTGATGGGGA  1142

seq1  TAGACTACACCTTCAAACTATGAAACAAAATGAATTC  1184
      |||||||||||||||||||||||||||||||||||||
seq2  TAGACTACACCTTCAAACTATGAAACAAAATGAATTC  1179


seq1: chr10_30936076_30937250
seq2: B6Ng01-258D02.g_66_1219

seq1  GAATTCAATCCCCAAGACTCACAAGAAAGACAGTCAACTCTCACTGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCCAAGACTCACAAGAAAGACAGTCAACTCTCACTGACTT  50

seq1  TTTTTTTTCTGACCTCCACATACACACCATGGCACACCCACCCATGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTGACCTCCACATACACACCATGGCACACCCACCCATGTACA  100

seq1  ATGAATATAATAAATGTAACTCTTTAAATTGGACTTATGGGAACCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATAATAAATGTAACTCTTTAAATTGGACTTATGGGAACCCATTT  150

seq1  ATGAGTGGGGTGAGTAGCCCAGATGCATAATTCCTTAAGGCAGTGTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTGGGGTGAGTAGCCCAGATGCATAATTCCTTAAGGCAGTGTGGAC  200

seq1  TGAGAAACAGGAAGCATAAGGCTGCATGGCCACCGGGAAGGAAAAGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACAGGAAGCATAAGGCTGCATGGCCACCGGGAAGGAAAAGCTGT  250

seq1  ATTTCTGCACTTCACATTGGGTTTCATAGAGCCAAATCAAAGTTCAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGCACTTCACATTGGGTTTCATAGAGCCAAATCAAAGTTCAGTAG  300

seq1  CACAGACTTTGTGTTGCTCCCTACCAGTCTATTAGTGAACTTGAGACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTTGTGTTGCTCCCTACCAGTCTATTAGTGAACTTGAGACAAA  350

seq1  TTGTCAGTTTCCATTGCTACCAGTGAAACAGGGACAAGGGGCAGTATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTTTCCATTGCTACCAGTGAAACAGGGACAAGGGGCAGTATACA  400

seq1  AAGAAAGCAACAAGACAAGCATAGGTCCTGGTGTGGAGCAAATGCAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCAACAAGACAAGCATAGGTCCTGGTGTGGAGCAAATGCAAATC  450

seq1  AAATGCCTTTTCTGCCATTTTTTCGGTGATGTTAGTAGTTTATTTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCTTTTCTGCCATTTTTTCGGTGATGTTAGTAGTTTATTTAAATG  500

seq1  TTCTTCTAGATATTTATTACCAGAATTCACTCTGGGACTAAGCACTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTAGATATTTATTACCAGAATTCACTCTGGGACTAAGCACTCAGT  550

seq1  ATGTAATATGGGACTCAGAATATTTTAAAATAATAGGTCTATTTCATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATATGGGACTCAGAATATTTTAAAATAATAGGTCTATTTCATGCA  600

seq1  ATGTTTAGTTATGGCTCTGCCAATCTCCATTTGATTCCTTTTATCAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGTTATGGCTCTGCCAATCTCCATTTGATTCCTTTTATCAATCT  650

seq1  TTTGGCATTTGGGAATAAAAGACACTATGCTGCTGTTTTCCTCTTCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCATTTGGGAATAAAAGACACTATGCTGCTGTTTTCCTCTTCTGCA  700

seq1  GTGCAAAATCTTGAAGGAGCCACCCAGTGTGCCTCTCAGCTGTAGTGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAATCTTGAAGGAGCCACCCAGTGTGCCTCTCAGCTGTAGTGTGC  750

seq1  TTTGATTAAAATACACGCACACTAGGAACATAAGGTCACTGCGACCAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTAAAATACACGCACACTAGGAACATAAGGTCACTGCGACCAGCT  800

seq1  GAAGGAAATGTATTTGGCAACTGGATTTCCAGAAAGTGTTTCCTATGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAATGTATTTGGCAACTGGATTTCCAGAAAGTGTTTCCTATGAGC  850

seq1  TTGCCTCTCTCATTCCAGATGTTAGTATCTTTGACTGACTGCCATGGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTCTCATTCCAGATGTTAGTATCTTTGACTGACTGCCATGGCTA  900

seq1  GAAAAGGCCTTTATAAAAGACTGCCCCAGGAAAGGAGTAATAATATCTGA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAAAGGCCTTTATAAAAGACTGCCCCAGGAAAGGAGTAAT-ATATCTGA  949

seq1  GCTTGAATTTCATGTTTTAGCGGAGAATAAGCATGATG-TGTTGGCACGA  999
      ||||||||||||||||||||| ||||   ||||||||| |||||||||||
seq2  GCTTGAATTTCATGTTTTAGC-GAGA--TAGCATGATGTTGTTGGCACGA  996

seq1  TGGTGTCTGTGTAGAGGCAGAAGTCATGGATGACCCATGCTGCTGGAGAG  1049
      ||||||||||||||| ||||||||||| ||||| ||||||||||||||||
seq2  TGGTGTCTGTGTAGA-GCAGAAGTCAT-GATGA-CCATGCTGCTGGAGAG  1043

seq1  CCAACTCTAAAGCCTTCCTGGTCTGGTTAGCATGGGCTCCTCTGCTCCTT  1099
      |  |||||||   |||    |||||  ||||||||||| ||||||||   
seq2  C--ACTCTAAGCTCTT----GTCTG--TAGCATGGGCT-CTCTGCTC--A  1082

seq1  TGATTCTACTGTGATTTGTAAAAGTGTGTTCTTCTTTGAAAATGTTCTT-  1148
      ||  |||||||||||||||||    ||||||||||| | |||||||||| 
seq2  TGGATCTACTGTGATTTGTAA----GTGTTCTTCTTGGCAAATGTTCTTG  1128

seq1  AGACCATTGCACAATCAGTTGCTTTAT  1175
      ||| |||||||| ||||||||| ||||
seq2  AGAACATTGCAC-ATCAGTTGCCTTAT  1154


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